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Results: 1 to 20 of 385

1.

SDT: A Virus Classification Tool Based on Pairwise Sequence Alignment and Identity Calculation.

Muhire BM, Varsani A, Martin DP.

PLoS One. 2014 Sep 26;9(9):e108277. doi: 10.1371/journal.pone.0108277. eCollection 2014.

PMID:
25259891
[PubMed - in process]
Free PMC Article
2.

Tomato mottle wrinkle virus, a recombinant begomovirus infecting tomato in Argentina.

Vaghi Medina CG, Martin DP, López Lambertini PM.

Arch Virol. 2014 Sep 25. [Epub ahead of print]

PMID:
25252814
[PubMed - as supplied by publisher]
3.

The influence of secondary structure, selection and recombination on rubella virus nucleotide substitution rate estimates.

Cloete LJ, Tanov EP, Muhire BM, Martin DP, Harkins GW.

Virol J. 2014 Sep 16;11:166. doi: 10.1186/1743-422X-11-166.

PMID:
25224517
[PubMed - in process]
Free PMC Article
4.

Inducible resistance to maize streak virus.

Shepherd DN, Dugdale B, Martin DP, Varsani A, Lakay FM, Bezuidenhout ME, Monjane AL, Thomson JA, Dale J, Rybicki EP.

PLoS One. 2014 Aug 28;9(8):e105932. doi: 10.1371/journal.pone.0105932. eCollection 2014.

PMID:
25166274
[PubMed - in process]
Free PMC Article
5.

Exploring the influence of the protein environment on metal-binding pharmacophores.

Martin DP, Blachly PG, McCammon JA, Cohen SM.

J Med Chem. 2014 Aug 28;57(16):7126-35. doi: 10.1021/jm500984b. Epub 2014 Aug 19.

PMID:
25116076
[PubMed - in process]
6.

A preliminary study of volatile agents or total intravenous anesthesia for neurophysiological monitoring during posterior spinal fusion in adolescents with idiopathic scoliosis.

Martin DP, Bhalla T, Thung A, Rice J, Beebe A, Samora W, Klamar J, Tobias JD.

Spine (Phila Pa 1976). 2014 Oct 15;39(22):E1318-24. doi: 10.1097/BRS.0000000000000550.

PMID:
25099322
[PubMed - in process]
7.

Appearances can be deceptive: revealing a hidden viral infection with deep sequencing in a plant quarantine context.

Candresse T, Filloux D, Muhire B, Julian C, Galzi S, Fort G, Bernardo P, Daugrois JH, Fernandez E, Martin DP, Varsani A, Roumagnac P.

PLoS One. 2014 Jul 25;9(7):e102945. doi: 10.1371/journal.pone.0102945. eCollection 2014.

PMID:
25061967
[PubMed - in process]
Free PMC Article
8.

Patterns of recombination in HIV-1M are influenced by selection disfavouring the survival of recombinants with disrupted genomic RNA and protein structures.

Golden M, Muhire BM, Semegni Y, Martin DP.

PLoS One. 2014 Jun 17;9(6):e100400. doi: 10.1371/journal.pone.0100400. eCollection 2014.

PMID:
24936864
[PubMed - in process]
Free PMC Article
9.

A high degree of African streak virus diversity within Nigerian maize fields includes a new mastrevirus from Axonopus compressus.

Oluwafemi S, Kraberger S, Shepherd DN, Martin DP, Varsani A.

Arch Virol. 2014 Oct;159(10):2765-70. doi: 10.1007/s00705-014-2090-7. Epub 2014 May 6.

PMID:
24796552
[PubMed - in process]
10.

Extensive recombination-induced disruption of genetic interactions is highly deleterious but can be partially reversed by small numbers of secondary recombination events.

Monjane AL, Martin DP, Lakay F, Muhire BM, Pande D, Varsani A, Harkins G, Shepherd DN, Rybicki EP.

J Virol. 2014 Jul;88(14):7843-51. doi: 10.1128/JVI.00709-14. Epub 2014 Apr 30.

PMID:
24789787
[PubMed - indexed for MEDLINE]
11.

Establishment of three new genera in the family Geminiviridae: Becurtovirus, Eragrovirus and Turncurtovirus.

Varsani A, Navas-Castillo J, Moriones E, Hernández-Zepeda C, Idris A, Brown JK, Murilo Zerbini F, Martin DP.

Arch Virol. 2014 Mar 22. [Epub ahead of print]

PMID:
24658781
[PubMed - as supplied by publisher]
12.

Pigeon circoviruses display patterns of recombination, genomic secondary structure and selection similar to those of beak and feather disease viruses.

Stenzel T, Piasecki T, Chrząstek K, Julian L, Muhire BM, Golden M, Martin DP, Varsani A.

J Gen Virol. 2014 Jun;95(Pt 6):1338-51. doi: 10.1099/vir.0.063917-0. Epub 2014 Mar 17.

PMID:
24639400
[PubMed - indexed for MEDLINE]
13.

'Unconventional' coordination chemistry by metal chelating fragments in a metalloprotein active site.

Martin DP, Blachly PG, Marts AR, Woodruff TM, de Oliveira CA, McCammon JA, Tierney DL, Cohen SM.

J Am Chem Soc. 2014 Apr 9;136(14):5400-6. doi: 10.1021/ja500616m. Epub 2014 Mar 27.

PMID:
24635441
[PubMed - in process]
14.

Comparison of survival outcomes among cancer patients treated in and out of clinical trials.

Unger JM, Barlow WE, Martin DP, Ramsey SD, Leblanc M, Etzioni R, Hershman DL.

J Natl Cancer Inst. 2014 Mar;106(3):dju002. doi: 10.1093/jnci/dju002. Epub 2014 Mar 13.

PMID:
24627276
[PubMed - indexed for MEDLINE]
15.

Role of proteolytic activation of protein kinase Cδ in the pathogenesis of prion disease.

Harischandra DS, Kondru N, Martin DP, Kanthasamy A, Jin H, Anantharam V, Kanthasamy AG.

Prion. 2014 Jan-Feb;8(1):143-53.

PMID:
24576946
[PubMed - in process]
16.

Genome diversity and evidence of recombination and reassortment in nanoviruses from Europe.

Grigoras I, Ginzo AI, Martin DP, Varsani A, Romero J, Mammadov ACh, Huseynova IM, Aliyev JA, Kheyr-Pour A, Huss H, Ziebell H, Timchenko T, Vetten HJ, Gronenborn B.

J Gen Virol. 2014 May;95(Pt 5):1178-91. doi: 10.1099/vir.0.063115-0. Epub 2014 Feb 10.

PMID:
24515973
[PubMed - indexed for MEDLINE]
17.

Towards inferring the global movement of beak and feather disease virus.

Harkins GW, Martin DP, Christoffels A, Varsani A.

Virology. 2014 Feb;450-451:24-33. doi: 10.1016/j.virol.2013.11.033. Epub 2013 Dec 20.

PMID:
24503064
[PubMed - indexed for MEDLINE]
18.

Identification of STAT5A and STAT5B target genes in human T cells.

Kanai T, Seki S, Jenks JA, Kohli A, Kawli T, Martin DP, Snyder M, Bacchetta R, Nadeau KC.

PLoS One. 2014 Jan 30;9(1):e86790. doi: 10.1371/journal.pone.0086790. eCollection 2014.

PMID:
24497979
[PubMed - in process]
Free PMC Article
19.

Revisiting the classification of curtoviruses based on genome-wide pairwise identity.

Varsani A, Martin DP, Navas-Castillo J, Moriones E, Hernández-Zepeda C, Idris A, Murilo Zerbini F, Brown JK.

Arch Virol. 2014 Jul;159(7):1873-82. doi: 10.1007/s00705-014-1982-x. Epub 2014 Jan 25.

PMID:
24463952
[PubMed - indexed for MEDLINE]
20.

Phylogenetic reconstruction methods: an overview.

De Bruyn A, Martin DP, Lefeuvre P.

Methods Mol Biol. 2014;1115:257-77. doi: 10.1007/978-1-62703-767-9_13. Review.

PMID:
24415479
[PubMed - indexed for MEDLINE]

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