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Results: 1 to 20 of 396

1.

Revision of Begomovirus taxonomy based on pairwise sequence comparisons.

Brown JK, Zerbini FM, Navas-Castillo J, Moriones E, Ramos-Sobrinho R, Silva JC, Fiallo-Olivé E, Briddon RW, Hernández-Zepeda C, Idris A, Malathi VG, Martin DP, Rivera-Bustamante R, Ueda S, Varsani A.

Arch Virol. 2015 Jun;160(6):1593-619. doi: 10.1007/s00705-015-2398-y. Epub 2015 Apr 18.

PMID:
25894478
2.

Functionally conserved architecture of hepatitis C virus RNA genomes.

Mauger DM, Golden M, Yamane D, Williford S, Lemon SM, Martin DP, Weeks KM.

Proc Natl Acad Sci U S A. 2015 Mar 24;112(12):3692-7. doi: 10.1073/pnas.1416266112. Epub 2015 Mar 9.

PMID:
25775547
3.

A unified framework for classification of methods for benefit-risk assessment.

Najafzadeh M, Schneeweiss S, Choudhry N, Bykov K, Kahler KH, Martin DP, Gagne JJ.

Value Health. 2015 Mar;18(2):250-9. doi: 10.1016/j.jval.2014.11.001. Epub 2015 Feb 2.

PMID:
25773560
4.

Identification of novel Bromus- and Trifolium-associated circular DNA viruses.

Kraberger S, Farkas K, Bernardo P, Booker C, Argüello-Astorga GR, Mesléard F, Martin DP, Roumagnac P, Varsani A.

Arch Virol. 2015 May;160(5):1303-11. doi: 10.1007/s00705-015-2358-6. Epub 2015 Feb 21.

PMID:
25701210
5.

Gene-wide identification of episodic selection.

Murrell B, Weaver S, Smith MD, Wertheim JO, Murrell S, Aylward A, Eren K, Pollner T, Martin DP, Smith DM, Scheffler K, Kosakovsky Pond SL.

Mol Biol Evol. 2015 May;32(5):1365-71. doi: 10.1093/molbev/msv035. Epub 2015 Feb 19.

PMID:
25701167
6.

Sequence analysis of Indian iris yellow spot virus ambisense genome segments: evidence of interspecies RNA recombination.

Gawande SJ, Gurav VS, Ingle AA, Martin DP, Asokan R, Gopal J.

Arch Virol. 2015 May;160(5):1285-9. doi: 10.1007/s00705-015-2354-x. Epub 2015 Feb 6.

PMID:
25655262
7.

Characterisation of a diverse range of circular replication-associated protein encoding DNA viruses recovered from a sewage treatment oxidation pond.

Kraberger S, Argüello-Astorga GR, Greenfield LG, Galilee C, Law D, Martin DP, Varsani A.

Infect Genet Evol. 2015 Apr;31:73-86. doi: 10.1016/j.meegid.2015.01.001. Epub 2015 Jan 9.

PMID:
25583447
8.

Identification of an Australian-like dicot-infecting mastrevirus in Pakistan.

Kraberger S, Mumtaz H, Claverie S, Martin DP, Briddon RW, Varsani A.

Arch Virol. 2015 Mar;160(3):825-30. doi: 10.1007/s00705-014-2299-5. Epub 2014 Dec 24.

PMID:
25537086
9.

Molecular diversity of Chickpea chlorotic dwarf virus in Sudan: high rates of intra-species recombination - a driving force in the emergence of new strains.

Kraberger S, Kumari SG, Hamed AA, Gronenborn B, Thomas JE, Sharman M, Harkins GW, Muhire BM, Martin DP, Varsani A.

Infect Genet Evol. 2015 Jan;29:203-15. doi: 10.1016/j.meegid.2014.11.024. Epub 2014 Nov 29.

PMID:
25444941
10.

Mapping the distribution of maize streak virus genotypes across the forest and transition zones of Ghana.

Oppong A, Offei SK, Ofori K, Adu-Dapaah H, Lamptey JN, Kurenbach B, Walters M, Shepherd DN, Martin DP, Varsani A.

Arch Virol. 2015 Feb;160(2):483-92. doi: 10.1007/s00705-014-2260-7. Epub 2014 Oct 26.

PMID:
25344899
11.

SDT: a virus classification tool based on pairwise sequence alignment and identity calculation.

Muhire BM, Varsani A, Martin DP.

PLoS One. 2014 Sep 26;9(9):e108277. doi: 10.1371/journal.pone.0108277. eCollection 2014.

12.

Tomato mottle wrinkle virus, a recombinant begomovirus infecting tomato in Argentina.

Vaghi Medina CG, Martin DP, López Lambertini PM.

Arch Virol. 2015 Feb;160(2):581-5. doi: 10.1007/s00705-014-2216-y. Epub 2014 Sep 25.

PMID:
25252814
13.

The influence of secondary structure, selection and recombination on rubella virus nucleotide substitution rate estimates.

Cloete LJ, Tanov EP, Muhire BM, Martin DP, Harkins GW.

Virol J. 2014 Sep 16;11:166. doi: 10.1186/1743-422X-11-166.

14.

Inducible resistance to maize streak virus.

Shepherd DN, Dugdale B, Martin DP, Varsani A, Lakay FM, Bezuidenhout ME, Monjane AL, Thomson JA, Dale J, Rybicki EP.

PLoS One. 2014 Aug 28;9(8):e105932. doi: 10.1371/journal.pone.0105932. eCollection 2014.

15.

Exploring the influence of the protein environment on metal-binding pharmacophores.

Martin DP, Blachly PG, McCammon JA, Cohen SM.

J Med Chem. 2014 Aug 28;57(16):7126-35. doi: 10.1021/jm500984b. Epub 2014 Aug 19.

PMID:
25116076
16.

A preliminary study of volatile agents or total intravenous anesthesia for neurophysiological monitoring during posterior spinal fusion in adolescents with idiopathic scoliosis.

Martin DP, Bhalla T, Thung A, Rice J, Beebe A, Samora W, Klamar J, Tobias JD.

Spine (Phila Pa 1976). 2014 Oct 15;39(22):E1318-24. doi: 10.1097/BRS.0000000000000550.

PMID:
25099322
17.

Appearances can be deceptive: revealing a hidden viral infection with deep sequencing in a plant quarantine context.

Candresse T, Filloux D, Muhire B, Julian C, Galzi S, Fort G, Bernardo P, Daugrois JH, Fernandez E, Martin DP, Varsani A, Roumagnac P.

PLoS One. 2014 Jul 25;9(7):e102945. doi: 10.1371/journal.pone.0102945. eCollection 2014.

18.

Research capacity. Enabling the genomic revolution in Africa.

H3Africa Consortium, Rotimi C, Abayomi A, Abimiku A, Adabayeri VM, Adebamowo C, Adebiyi E, Ademola AD, Adeyemo A, Adu D, Affolabi D, Agongo G, Ajayi S, Akarolo-Anthony S, Akinyemi R, Akpalu A, Alberts M, Alonso Betancourt O, Alzohairy AM, Ameni G, Amodu O, Anabwani G, Andersen K, Arogundade F, Arulogun O, Asogun D, Bakare R, Balde N, Baniecki ML, Beiswanger C, Benkahla A, Bethke L, Boehnke M, Boima V, Brandful J, Brooks AI, Brosius FC, Brown C, Bucheton B, Burke DT, Burnett BG, Carrington-Lawrence S, Carstens N, Chisi J, Christoffels A, Cooper R, Cordell H, Crowther N, Croxton T, de Vries J, Derr L, Donkor P, Doumbia S, Duncanson A, Ekem I, El Sayed A, Engel ME, Enyaru JC, Everett D, Fadlelmola FM, Fakunle E, Fischbeck KH, Fischer A, Folarin O, Gamieldien J, Garry RF, Gaseitsiwe S, Gbadegesin R, Ghansah A, Giovanni M, Goesbeck P, Gomez-Olive FX, Grant DS, Grewal R, Guyer M, Hanchard NA, Happi CT, Hazelhurst S, Hennig BJ, Hertz- C, Fowler, Hide W, Hilderbrandt F, Hugo-Hamman C, Ibrahim ME, James R, Jaufeerally-Fakim Y, Jenkins C, Jentsch U, Jiang PP, Joloba M, Jongeneel V, Joubert F, Kader M, Kahn K, Kaleebu P, Kapiga SH, Kassim SK, Kasvosve I, Kayondo J, Keavney B, Kekitiinwa A, Khan SH, Kimmel P, King MC, Kleta R, Koffi M, Kopp J, Kretzler M, Kumuthini J, Kyobe S, Kyobutungi C, Lackland DT, Lacourciere KA, Landouré G, Lawlor R, Lehner T, Lesosky M, Levitt N, Littler K, Lombard Z, Loring JF, Lyantagaye S, Macleod A, Madden EB, Mahomva CR, Makani J, Mamven M, Marape M, Mardon G, Marshall P, Martin DP, Masiga D, Mason R, Mate-Kole M, Matovu E, Mayige M, Mayosi BM, Mbanya JC, McCurdy SA, McCarthy MI, McIlleron H, Mc'Ligeyo SO, Merle C, Mocumbi AO, Mondo C, Moran JV, Motala A, Moxey-Mims M, Mpoloka WS, Msefula CL, Mthiyane T, Mulder N, Mulugeta Gh, Mumba D, Musuku J, Nagdee M, Nash O, Ndiaye D, Nguyen AQ, Nicol M, Nkomazana O, Norris S, Nsangi B, Nyarko A, Nyirenda M, Obe E, Obiakor R, Oduro A, Ofori-Acquah SF, Ogah O, Ogendo S, Ohene-Frempong K, Ojo A, Olanrewaju T, Oli J, Osafo C, Ouwe Missi Oukem-Boyer O, Ovbiagele B, Owen A, Owolabi MO, Owolabi L, Owusu-Dabo E, Pare G, Parekh R, Patterton HG, Penno MB, Peterson J, Pieper R, Plange-Rhule J, Pollak M, Puzak J, Ramesar RS, Ramsay M, Rasooly R, Reddy S, Sabeti PC, Sagoe K, Salako T, Samassékou O, Sandhu MS, Sankoh O, Sarfo FS, Sarr M, Shaboodien G, Sidibe I, Simo G, Simuunza M, Smeeth L, Sobngwi E, Soodyall H, Sorgho H, Sow Bah O, Srinivasan S, Stein DJ, Susser ES, Swanepoel C, Tangwa G, Tareila A, Tastan Bishop O, Tayo B, Tiffin N, Tinto H, Tobin E, Tollman SM, Traoré M, Treadwell MJ, Troyer J, Tsimako-Johnstone M, Tukei V, Ulasi I, Ulenga N, van Rooyen B, Wachinou AP, Waddy SP, Wade A, Wayengera M, Whitworth J, Wideroff L, Winkler CA, Winnicki S, Wonkam A, Yewondwos M, sen T, Yozwiak N, Zar H.

Science. 2014 Jun 20;344(6190):1346-8. doi: 10.1126/science.1251546. No abstract available.

PMID:
24948725
19.

Patterns of recombination in HIV-1M are influenced by selection disfavouring the survival of recombinants with disrupted genomic RNA and protein structures.

Golden M, Muhire BM, Semegni Y, Martin DP.

PLoS One. 2014 Jun 17;9(6):e100400. doi: 10.1371/journal.pone.0100400. eCollection 2014.

20.

A high degree of African streak virus diversity within Nigerian maize fields includes a new mastrevirus from Axonopus compressus.

Oluwafemi S, Kraberger S, Shepherd DN, Martin DP, Varsani A.

Arch Virol. 2014 Oct;159(10):2765-70. doi: 10.1007/s00705-014-2090-7. Epub 2014 May 6.

PMID:
24796552
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