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Results: 1 to 20 of 27

1.

Genome, Transcriptome, and Functional Analyses of Penicillium expansum Provide New Insights Into Secondary Metabolism and Pathogenicity.

Ballester AR, Marcet-Houben M, Levin E, Sela N, Selma-Lázaro C, Carmona L, Wisniewski M, Droby S, González-Candelas L, Gabaldón T.

Mol Plant Microbe Interact. 2015 Mar;28(3):232-48. doi: 10.1094/MPMI-09-14-0261-FI.

2.

Gene expansion shapes genome architecture in the human pathogen Lichtheimia corymbifera: an evolutionary genomics analysis in the ancient terrestrial mucorales (Mucoromycotina).

Schwartze VU, Winter S, Shelest E, Marcet-Houben M, Horn F, Wehner S, Linde J, Valiante V, Sammeth M, Riege K, Nowrousian M, Kaerger K, Jacobsen ID, Marz M, Brakhage AA, Gabaldón T, Böcker S, Voigt K.

PLoS Genet. 2014 Aug 14;10(8):e1004496. doi: 10.1371/journal.pgen.1004496. eCollection 2014 Aug.

3.

Systematic phenotyping of a large-scale Candida glabrata deletion collection reveals novel antifungal tolerance genes.

Schwarzmüller T, Ma B, Hiller E, Istel F, Tscherner M, Brunke S, Ames L, Firon A, Green B, Cabral V, Marcet-Houben M, Jacobsen ID, Quintin J, Seider K, Frohner I, Glaser W, Jungwirth H, Bachellier-Bassi S, Chauvel M, Zeidler U, Ferrandon D, Gabaldón T, Hube B, d'Enfert C, Rupp S, Cormack B, Haynes K, Kuchler K.

PLoS Pathog. 2014 Jun 19;10(6):e1004211. doi: 10.1371/journal.ppat.1004211. eCollection 2014 Jun.

4.

The complete genome of Blastobotrys (Arxula) adeninivorans LS3 - a yeast of biotechnological interest.

Kunze G, Gaillardin C, Czernicka M, Durrens P, Martin T, Böer E, Gabaldón T, Cruz JA, Talla E, Marck C, Goffeau A, Barbe V, Baret P, Baronian K, Beier S, Bleykasten C, Bode R, Casaregola S, Despons L, Fairhead C, Giersberg M, Gierski PP, Hähnel U, Hartmann A, Jankowska D, Jubin C, Jung P, Lafontaine I, Leh-Louis V, Lemaire M, Marcet-Houben M, Mascher M, Morel G, Richard GF, Riechen J, Sacerdot C, Sarkar A, Savel G, Schacherer J, Sherman DJ, Stein N, Straub ML, Thierry A, Trautwein-Schult A, Vacherie B, Westhof E, Worch S, Dujon B, Souciet JL, Wincker P, Scholz U, Neuvéglise C.

Biotechnol Biofuels. 2014 Apr 24;7:66. doi: 10.1186/1754-6834-7-66. eCollection 2014.

5.

The complete mitochondrial DNA of the silky shark (Carcharhinus falciformis).

Galván-Tirado C, Hinojosa-Alvarez S, Diaz-Jaimes P, Marcet-Houben M, García-De-León FJ.

Mitochondrial DNA. 2014 Jan 22. [Epub ahead of print]

PMID:
24450712
6.

The complete mitogenome of the common dolphinfish (Coryphaena hippurus).

Diaz-Jaimes P, Bayona-Vasquez N, Hinojosa-Alvarez S, Uribe-Alcocer M, Marcet-Houben M.

Mitochondrial DNA. 2014 Jan 10. [Epub ahead of print]

PMID:
24409908
7.

The complete mitochondrial genome of the Giant Manta ray, Manta birostris.

Hinojosa-Alvarez S, Díaz-Jaimes P, Marcet-Houben M, Gabaldón T.

Mitochondrial DNA. 2014 Jan 10. [Epub ahead of print]

PMID:
24409907
8.

Complete DNA sequence of Kuraishia capsulata illustrates novel genomic features among budding yeasts (Saccharomycotina).

Morales L, Noel B, Porcel B, Marcet-Houben M, Hullo MF, Sacerdot C, Tekaia F, Leh-Louis V, Despons L, Khanna V, Aury JM, Barbe V, Couloux A, Labadie K, Pelletier E, Souciet JL, Boekhout T, Gabaldon T, Wincker P, Dujon B.

Genome Biol Evol. 2013;5(12):2524-39. doi: 10.1093/gbe/evt201.

9.

A study of the DNA damage checkpoint in Candida albicans: uncoupling of the functions of Rad53 in DNA repair, cell cycle regulation and genotoxic stress-induced polarized growth.

Loll-Krippleber R, d'Enfert C, Feri A, Diogo D, Perin A, Marcet-Houben M, Bougnoux ME, Legrand M.

Mol Microbiol. 2014 Feb;91(3):452-71. doi: 10.1111/mmi.12471. Epub 2013 Dec 25.

PMID:
24286230
10.

PhylomeDB v4: zooming into the plurality of evolutionary histories of a genome.

Huerta-Cepas J, Capella-Gutiérrez S, Pryszcz LP, Marcet-Houben M, Gabaldón T.

Nucleic Acids Res. 2014 Jan;42(Database issue):D897-902. doi: 10.1093/nar/gkt1177. Epub 2013 Nov 25.

11.

The genome and development-dependent transcriptomes of Pyronema confluens: a window into fungal evolution.

Traeger S, Altegoer F, Freitag M, Gabaldon T, Kempken F, Kumar A, Marcet-Houben M, Pöggeler S, Stajich JE, Nowrousian M.

PLoS Genet. 2013;9(9):e1003820. doi: 10.1371/journal.pgen.1003820. Epub 2013 Sep 19.

12.

Comparative genomics of emerging pathogens in the Candida glabrata clade.

Gabaldón T, Martin T, Marcet-Houben M, Durrens P, Bolotin-Fukuhara M, Lespinet O, Arnaise S, Boisnard S, Aguileta G, Atanasova R, Bouchier C, Couloux A, Creno S, Almeida Cruz J, Devillers H, Enache-Angoulvant A, Guitard J, Jaouen L, Ma L, Marck C, Neuvéglise C, Pelletier E, Pinard A, Poulain J, Recoquillay J, Westhof E, Wincker P, Dujon B, Hennequin C, Fairhead C.

BMC Genomics. 2013 Sep 14;14:623. doi: 10.1186/1471-2164-14-623.

13.

FUNGALOXPHOS: an integrated database for oxidative phosphorylation in fungi.

Lavín JL, Marcet-Houben M, Gutiérrez-Vázquez RL, Ramírez L, Pisabarro AG, Gabaldón T, Oguiza JA.

Mitochondrion. 2013 Jul;13(4):357-9. doi: 10.1016/j.mito.2013.04.009. Epub 2013 Apr 28.

PMID:
23628689
14.

Genome sequence of the necrotrophic fungus Penicillium digitatum, the main postharvest pathogen of citrus.

Marcet-Houben M, Ballester AR, de la Fuente B, Harries E, Marcos JF, González-Candelas L, Gabaldón T.

BMC Genomics. 2012 Nov 21;13:646. doi: 10.1186/1471-2164-13-646.

15.

The Schistosoma mansoni phylome: using evolutionary genomics to gain insight into a parasite's biology.

Silva LL, Marcet-Houben M, Nahum LA, Zerlotini A, Gabaldón T, Oliveira G.

BMC Genomics. 2012 Nov 13;13:617. doi: 10.1186/1471-2164-13-617.

16.

The genome of wine yeast Dekkera bruxellensis provides a tool to explore its food-related properties.

Piškur J, Ling Z, Marcet-Houben M, Ishchuk OP, Aerts A, LaButti K, Copeland A, Lindquist E, Barry K, Compagno C, Bisson L, Grigoriev IV, Gabaldón T, Phister T.

Int J Food Microbiol. 2012 Jul 2;157(2):202-9. doi: 10.1016/j.ijfoodmicro.2012.05.008. Epub 2012 May 14.

PMID:
22663979
17.

Phylogenomics supports microsporidia as the earliest diverging clade of sequenced fungi.

Capella-Gutiérrez S, Marcet-Houben M, Gabaldón T.

BMC Biol. 2012 May 31;10:47. doi: 10.1186/1741-7007-10-47.

18.

Evolutionary histories of expanded peptidase families in Schistosoma mansoni.

Silva LL, Marcet-Houben M, Zerlotini A, Gabaldón T, Oliveira G, Nahum LA.

Mem Inst Oswaldo Cruz. 2011 Nov;106(7):864-77.

19.

TreeKO: a duplication-aware algorithm for the comparison of phylogenetic trees.

Marcet-Houben M, Gabaldón T.

Nucleic Acids Res. 2011 May;39(10):e66. doi: 10.1093/nar/gkr087. Epub 2011 Feb 18.

20.

Regulation of Candida glabrata oxidative stress resistance is adapted to host environment.

Roetzer A, Klopf E, Gratz N, Marcet-Houben M, Hiller E, Rupp S, Gabaldón T, Kovarik P, Schüller C.

FEBS Lett. 2011 Jan 21;585(2):319-27. doi: 10.1016/j.febslet.2010.12.006. Epub 2010 Dec 13.

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