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Results: 17

1.

RNA degradation paths in a 12-subunit nuclear exosome complex.

Makino DL, Schuch B, Stegmann E, Baumgärtner M, Basquin C, Conti E.

Nature. 2015 Aug 6;524(7563):54-8. doi: 10.1038/nature14865. Epub 2015 Jul 29.

PMID:
26222026
2.

The exosome-binding factors Rrp6 and Rrp47 form a composite surface for recruiting the Mtr4 helicase.

Schuch B, Feigenbutz M, Makino DL, Falk S, Basquin C, Mitchell P, Conti E.

EMBO J. 2014 Dec 1;33(23):2829-46. doi: 10.15252/embj.201488757. Epub 2014 Oct 15.

PMID:
25319414
3.

Structure determination of an 11-subunit exosome in complex with RNA by molecular replacement.

Makino DL, Conti E.

Acta Crystallogr D Biol Crystallogr. 2013 Nov;69(Pt 11):2226-35. doi: 10.1107/S0907444913011438. Epub 2013 Oct 12.

4.

The RNA exosome and proteasome: common principles of degradation control.

Makino DL, Halbach F, Conti E.

Nat Rev Mol Cell Biol. 2013 Oct;14(10):654-60. doi: 10.1038/nrm3657. Epub 2013 Aug 29. Review.

PMID:
23989960
5.

Crystal structure of an RNA-bound 11-subunit eukaryotic exosome complex.

Makino DL, Baumgärtner M, Conti E.

Nature. 2013 Mar 7;495(7439):70-5. doi: 10.1038/nature11870. Epub 2013 Feb 3.

PMID:
23376952
6.

The crystallographic structure of Panicum Mosaic Virus (PMV).

Makino DL, Larson SB, McPherson A.

J Struct Biol. 2013 Jan;181(1):37-52. doi: 10.1016/j.jsb.2012.10.012. Epub 2012 Nov 1.

7.

Genome-wide measurement of RNA folding energies.

Wan Y, Qu K, Ouyang Z, Kertesz M, Li J, Tibshirani R, Makino DL, Nutter RC, Segal E, Chang HY.

Mol Cell. 2012 Oct 26;48(2):169-81. doi: 10.1016/j.molcel.2012.08.008. Epub 2012 Sep 13.

8.

Clamp loader ATPases and the evolution of DNA replication machinery.

Kelch BA, Makino DL, O'Donnell M, Kuriyan J.

BMC Biol. 2012 Apr 20;10:34. doi: 10.1186/1741-7007-10-34.

9.

How a DNA polymerase clamp loader opens a sliding clamp.

Kelch BA, Makino DL, O'Donnell M, Kuriyan J.

Science. 2011 Dec 23;334(6063):1675-80. doi: 10.1126/science.1211884.

10.

Role of the histone domain in the autoinhibition and activation of the Ras activator Son of Sevenless.

Gureasko J, Kuchment O, Makino DL, Sondermann H, Bar-Sagi D, Kuriyan J.

Proc Natl Acad Sci U S A. 2010 Feb 23;107(8):3430-5. doi: 10.1073/pnas.0913915107. Epub 2010 Feb 4.

11.

The mechanism of ATP-dependent primer-template recognition by a clamp loader complex.

Simonetta KR, Kazmirski SL, Goedken ER, Cantor AJ, Kelch BA, McNally R, Seyedin SN, Makino DL, O'Donnell M, Kuriyan J.

Cell. 2009 May 15;137(4):659-71. doi: 10.1016/j.cell.2009.03.044.

12.

Bence Jones KWR protein structures determined by X-ray crystallography.

Makino DL, Henschen-Edman AH, Larson SB, McPherson A.

Acta Crystallogr D Biol Crystallogr. 2007 Jul;63(Pt 7):780-92. Epub 2007 Jun 15.

PMID:
17582169
13.

Investigation of RNA structure in satellite panicum mosaic virus.

Makino DL, Day J, Larson SB, McPherson A.

Virology. 2006 Aug 1;351(2):420-31. Epub 2006 May 4.

14.

Four crystal forms of a Bence-Jones protein.

Makino DL, Henschen-Edman AH, McPherson A.

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2005 Jan 1;61(Pt 1):79-82. Epub 2004 Dec 2.

15.

The incorporation of large impurities into virus crystals.

Kuznetsov YG, Makino DL, Malkin AJ, McPherson A.

Acta Crystallogr D Biol Crystallogr. 2005 Jun;61(Pt 6):720-3. Epub 2005 May 26.

PMID:
15930628
16.

Preliminary analysis of crystals of panicum mosaic virus (PMV) by X-ray diffraction and atomic force microscopy.

Makino DL, Larson SB, McPherson A.

Acta Crystallogr D Biol Crystallogr. 2005 Feb;61(Pt 2):173-9. Epub 2005 Jan 19.

PMID:
15681868
17.

Structural and functional analyses of DM43, a snake venom metalloproteinase inhibitor from Didelphis marsupialis serum.

Neves-Ferreira AG, Perales J, Fox JW, Shannon JD, Makino DL, Garratt RC, Domont GB.

J Biol Chem. 2002 Apr 12;277(15):13129-37. Epub 2002 Jan 28.

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