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Results: 1 to 20 of 76

1.

Genome-Wide Analysis of Repeat Diversity across the Family Musaceae.

Novák P, Hřibová E, Neumann P, Koblížková A, Doležel J, Macas J.

PLoS One. 2014 Jun 16;9(6):e98918. doi: 10.1371/journal.pone.0098918. eCollection 2014.

PMID:
24932725
[PubMed - in process]
Free PMC Article
2.

Extracellular vesicle-mediated transfer of genetic information between the hematopoietic system and the brain in response to inflammation.

Ridder K, Keller S, Dams M, Rupp AK, Schlaudraff J, Turco DD, Starmann J, Macas J, Karpova D, Devraj K, Depboylu C, Landfried B, Arnold B, Plate KH, Höglinger G, Sültmann H, Altevogt P, Momma S.

PLoS Biol. 2014 Jun 3;12(6):e1001874. doi: 10.1371/journal.pbio.1001874. eCollection 2014 Jun.

PMID:
24893313
[PubMed - in process]
Free PMC Article
3.

Boom-Bust Turnovers of Megabase-Sized Centromeric DNA in Solanum Species: Rapid Evolution of DNA Sequences Associated with Centromeres.

Zhang H, Koblížková A, Wang K, Gong Z, Oliveira L, Torres GA, Wu Y, Zhang W, Novák P, Buell CR, Macas J, Jiang J.

Plant Cell. 2014 Apr 11;26(4):1436-1447. [Epub ahead of print]

PMID:
24728646
[PubMed - as supplied by publisher]
4.

Generation of neuronal progenitor cells in response to tumors in the human brain.

Macas J, Ku MC, Nern C, Xu Y, Bühler H, Remke M, Synowitz M, Franz K, Seifert V, Plate KH, Kettenmann H, Glass R, Momma S.

Stem Cells. 2014 Jan;32(1):244-57. doi: 10.1002/stem.1581.

PMID:
24170295
[PubMed - in process]
5.

Flow sorting and sequencing meadow fescue chromosome 4F.

Kopecký D, Martis M, Číhalíková J, Hřibová E, Vrána J, Bartoš J, Kopecká J, Cattonaro F, Stočes Š, Novák P, Neumann P, Macas J, Šimková H, Studer B, Asp T, Baird JH, Navrátil P, Karafiátová M, Kubaláková M, Šafář J, Mayer K, Doležel J.

Plant Physiol. 2013 Nov;163(3):1323-37. doi: 10.1104/pp.113.224105. Epub 2013 Oct 4.

PMID:
24096412
[PubMed - indexed for MEDLINE]
6.

High-copy sequences reveal distinct evolution of the rye B chromosome.

Klemme S, Banaei-Moghaddam AM, Macas J, Wicker T, Novák P, Houben A.

New Phytol. 2013 Jul;199(2):550-8. doi: 10.1111/nph.12289. Epub 2013 Apr 24.

PMID:
23614816
[PubMed - indexed for MEDLINE]
7.

Contrasting patterns of transposable element and satellite distribution on sex chromosomes (XY1Y2) in the dioecious plant Rumex acetosa.

Steflova P, Tokan V, Vogel I, Lexa M, Macas J, Novak P, Hobza R, Vyskot B, Kejnovsky E.

Genome Biol Evol. 2013;5(4):769-82. doi: 10.1093/gbe/evt049.

PMID:
23542206
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

Diploidization and genome size change in allopolyploids is associated with differential dynamics of low- and high-copy sequences.

Renny-Byfield S, Kovarik A, Kelly LJ, Macas J, Novak P, Chase MW, Nichols RA, Pancholi MR, Grandbastien MA, Leitch AR.

Plant J. 2013 Jun;74(5):829-39. doi: 10.1111/tpj.12168. Epub 2013 Apr 5.

PMID:
23517128
[PubMed - indexed for MEDLINE]
9.

RepeatExplorer: a Galaxy-based web server for genome-wide characterization of eukaryotic repetitive elements from next-generation sequence reads.

Novák P, Neumann P, Pech J, Steinhaisl J, Macas J.

Bioinformatics. 2013 Mar 15;29(6):792-3. doi: 10.1093/bioinformatics/btt054. Epub 2013 Feb 1.

PMID:
23376349
[PubMed - indexed for MEDLINE]
Free Article
10.

Next generation sequencing analysis reveals a relationship between rDNA unit diversity and locus number in Nicotiana diploids.

Matyášek R, Renny-Byfield S, Fulneček J, Macas J, Grandbastien MA, Nichols R, Leitch A, Kovařík A.

BMC Genomics. 2012 Dec 23;13:722. doi: 10.1186/1471-2164-13-722.

PMID:
23259460
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

Nondisjunction in favor of a chromosome: the mechanism of rye B chromosome drive during pollen mitosis.

Banaei-Moghaddam AM, Schubert V, Kumke K, Weiβ O, Klemme S, Nagaki K, Macas J, González-Sánchez M, Heredia V, Gómez-Revilla D, González-García M, Vega JM, Puertas MJ, Houben A.

Plant Cell. 2012 Oct;24(10):4124-34. doi: 10.1105/tpc.112.105270. Epub 2012 Oct 26.

PMID:
23104833
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

The holocentric species Luzula elegans shows interplay between centromere and large-scale genome organization.

Heckmann S, Macas J, Kumke K, Fuchs J, Schubert V, Ma L, Novák P, Neumann P, Taudien S, Platzer M, Houben A.

Plant J. 2013 Feb;73(4):555-65. doi: 10.1111/tpj.12054. Epub 2012 Dec 12.

PMID:
23078243
[PubMed - indexed for MEDLINE]
13.

Repeatless and repeat-based centromeres in potato: implications for centromere evolution.

Gong Z, Wu Y, Koblízková A, Torres GA, Wang K, Iovene M, Neumann P, Zhang W, Novák P, Buell CR, Macas J, Jiang J.

Plant Cell. 2012 Sep;24(9):3559-74. doi: 10.1105/tpc.112.100511. Epub 2012 Sep 11.

PMID:
22968715
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

Endothelial Wnt/β-catenin signaling inhibits glioma angiogenesis and normalizes tumor blood vessels by inducing PDGF-B expression.

Reis M, Czupalla CJ, Ziegler N, Devraj K, Zinke J, Seidel S, Heck R, Thom S, Macas J, Bockamp E, Fruttiger M, Taketo MM, Dimmeler S, Plate KH, Liebner S.

J Exp Med. 2012 Aug 27;209(9):1611-27. doi: 10.1084/jem.20111580. Epub 2012 Aug 20.

PMID:
22908324
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

Selfish supernumerary chromosome reveals its origin as a mosaic of host genome and organellar sequences.

Martis MM, Klemme S, Banaei-Moghaddam AM, Blattner FR, Macas J, Schmutzer T, Scholz U, Gundlach H, Wicker T, Šimková H, Novák P, Neumann P, Kubaláková M, Bauer E, Haseneyer G, Fuchs J, Doležel J, Stein N, Mayer KF, Houben A.

Proc Natl Acad Sci U S A. 2012 Aug 14;109(33):13343-6. doi: 10.1073/pnas.1204237109. Epub 2012 Jul 30.

PMID:
22847450
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

Stretching the rules: monocentric chromosomes with multiple centromere domains.

Neumann P, Navrátilová A, Schroeder-Reiter E, Koblížková A, Steinbauerová V, Chocholová E, Novák P, Wanner G, Macas J.

PLoS Genet. 2012;8(6):e1002777. doi: 10.1371/journal.pgen.1002777. Epub 2012 Jun 21.

PMID:
22737088
[PubMed - indexed for MEDLINE]
Free PMC Article
17.

Next-generation sequencing reveals the impact of repetitive DNA across phylogenetically closely related genomes of Orobanchaceae.

Piednoël M, Aberer AJ, Schneeweiss GM, Macas J, Novak P, Gundlach H, Temsch EM, Renner SS.

Mol Biol Evol. 2012 Nov;29(11):3601-11. doi: 10.1093/molbev/mss168. Epub 2012 Jun 21.

PMID:
22723303
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

Independent, rapid and targeted loss of highly repetitive DNA in natural and synthetic allopolyploids of Nicotiana tabacum.

Renny-Byfield S, Kovařík A, Chester M, Nichols RA, Macas J, Novák P, Leitch AR.

PLoS One. 2012;7(5):e36963. doi: 10.1371/journal.pone.0036963. Epub 2012 May 14.

PMID:
22606317
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

A widespread occurrence of extra open reading frames in plant Ty3/gypsy retrotransposons.

Steinbauerová V, Neumann P, Novák P, Macas J.

Genetica. 2011 Dec;139(11-12):1543-55. doi: 10.1007/s10709-012-9654-9. Epub 2012 Apr 29.

PMID:
22544262
[PubMed - indexed for MEDLINE]
20.

Survey sequencing reveals elevated DNA transposon activity, novel elements, and variation in repetitive landscapes among vesper bats.

Pagán HJ, Macas J, Novák P, McCulloch ES, Stevens RD, Ray DA.

Genome Biol Evol. 2012;4(4):575-85. doi: 10.1093/gbe/evs038. Epub 2012 Apr 4.

PMID:
22491057
[PubMed - indexed for MEDLINE]
Free PMC Article

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