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Items: 1 to 20 of 88

1.

In Depth Characterization of Repetitive DNA in 23 Plant Genomes Reveals Sources of Genome Size Variation in the Legume Tribe Fabeae.

Macas J, Novák P, Pellicer J, Čížková J, Koblížková A, Neumann P, Fuková I, Doležel J, Kelly LJ, Leitch IJ.

PLoS One. 2015 Nov 25;10(11):e0143424. doi: 10.1371/journal.pone.0143424. eCollection 2015.

2.

Haplotype Detection from Next-Generation Sequencing in High-Ploidy-Level Species: 45S rDNA Gene Copies in the Hexaploid Spartina maritima.

Boutte J, Aliaga B, Lima O, Ferreira de Carvalho J, Ainouche A, Macas J, Rousseau-Gueutin M, Coriton O, Ainouche M, Salmon A.

G3 (Bethesda). 2015 Nov 3;6(1):29-40. doi: 10.1534/g3.115.023242.

3.

Holocentromeres in Rhynchospora are associated with genome-wide centromere-specific repeat arrays interspersed among euchromatin.

Marques A, Ribeiro T, Neumann P, Macas J, Novák P, Schubert V, Pellino M, Fuchs J, Ma W, Kuhlmann M, Brandt R, Vanzela AL, Beseda T, Šimková H, Pedrosa-Harand A, Houben A.

Proc Natl Acad Sci U S A. 2015 Nov 3;112(44):13633-8. doi: 10.1073/pnas.1512255112. Epub 2015 Oct 21. Erratum in: Proc Natl Acad Sci U S A. 2015 Dec 1;112(48):E6720.

4.

Centromere and telomere sequence alterations reflect the rapid genome evolution within the carnivorous plant genus Genlisea.

Tran TD, Cao HX, Jovtchev G, Neumann P, Novák P, Fojtová M, Vu GT, Macas J, Fajkus J, Schubert I, Fuchs J.

Plant J. 2015 Dec;84(6):1087-99. doi: 10.1111/tpj.13058. Epub 2015 Nov 30.

PMID:
26485466
5.

Chromatin organization and cytological features of carnivorous Genlisea species with large genome size differences.

Tran TD, Cao HX, Jovtchev G, Novák P, Vu GT, Macas J, Schubert I, Fuchs J.

Front Plant Sci. 2015 Aug 20;6:613. doi: 10.3389/fpls.2015.00613. eCollection 2015.

6.

A Set of Cytogenetic Markers Allows the Precise Identification of All A-Genome Chromosomes in Diploid and Polyploid Wheat.

Badaeva ED, Amosova AV, Goncharov NP, Macas J, Ruban AS, Grechishnikova IV, Zoshchuk SA, Houben A.

Cytogenet Genome Res. 2015;146(1):71-9. doi: 10.1159/000433458. Epub 2015 Jul 4.

7.

Extracellular vesicle-mediated transfer of functional RNA in the tumor microenvironment.

Ridder K, Sevko A, Heide J, Dams M, Rupp AK, Macas J, Starmann J, Tjwa M, Plate KH, Sültmann H, Altevogt P, Umansky V, Momma S.

Oncoimmunology. 2015 Mar 19;4(6):e1008371. eCollection 2015 Jun.

8.

Analysis of the giant genomes of Fritillaria (Liliaceae) indicates that a lack of DNA removal characterizes extreme expansions in genome size.

Kelly LJ, Renny-Byfield S, Pellicer J, Macas J, Novák P, Neumann P, Lysak MA, Day PD, Berger M, Fay MF, Nichols RA, Leitch AR, Leitch IJ.

New Phytol. 2015 Oct;208(2):596-607. doi: 10.1111/nph.13471. Epub 2015 Jun 8.

PMID:
26061193
9.

Centromeres Off the Hook: Massive Changes in Centromere Size and Structure Following Duplication of CenH3 Gene in Fabeae Species.

Neumann P, Pavlíková Z, Koblížková A, Fuková I, Jedličková V, Novák P, Macas J.

Mol Biol Evol. 2015 Jul;32(7):1862-79. doi: 10.1093/molbev/msv070. Epub 2015 Mar 13.

10.

Genes on B chromosomes: old questions revisited with new tools.

Banaei-Moghaddam AM, Martis MM, Macas J, Gundlach H, Himmelbach A, Altschmied L, Mayer KF, Houben A.

Biochim Biophys Acta. 2015 Jan;1849(1):64-70. doi: 10.1016/j.bbagrm.2014.11.007. Epub 2014 Dec 3. Review.

PMID:
25481283
11.

Genomic repeat abundances contain phylogenetic signal.

Dodsworth S, Chase MW, Kelly LJ, Leitch IJ, Macas J, Novák P, Piednoël M, Weiss-Schneeweiss H, Leitch AR.

Syst Biol. 2015 Jan;64(1):112-26. doi: 10.1093/sysbio/syu080. Epub 2014 Sep 25.

12.

Differential amplification of satellite PaB6 in chromosomally hypervariable Prospero autumnale complex (Hyacinthaceae).

Emadzade K, Jang TS, Macas J, Kovařík A, Novák P, Parker J, Weiss-Schneeweiss H.

Ann Bot. 2014 Dec;114(8):1597-608. doi: 10.1093/aob/mcu178. Epub 2014 Aug 28.

13.

Genome-wide analysis of repeat diversity across the family Musaceae.

Novák P, Hřibová E, Neumann P, Koblížková A, Doležel J, Macas J.

PLoS One. 2014 Jun 16;9(6):e98918. doi: 10.1371/journal.pone.0098918. eCollection 2014.

14.

Extracellular vesicle-mediated transfer of genetic information between the hematopoietic system and the brain in response to inflammation.

Ridder K, Keller S, Dams M, Rupp AK, Schlaudraff J, Del Turco D, Starmann J, Macas J, Karpova D, Devraj K, Depboylu C, Landfried B, Arnold B, Plate KH, Höglinger G, Sültmann H, Altevogt P, Momma S.

PLoS Biol. 2014 Jun 3;12(6):e1001874. doi: 10.1371/journal.pbio.1001874. eCollection 2014 Jun.

15.

Boom-Bust Turnovers of Megabase-Sized Centromeric DNA in Solanum Species: Rapid Evolution of DNA Sequences Associated with Centromeres.

Zhang H, Koblížková A, Wang K, Gong Z, Oliveira L, Torres GA, Wu Y, Zhang W, Novák P, Buell CR, Macas J, Jiang J.

Plant Cell. 2014 Apr 11;26(4):1436-1447. [Epub ahead of print]

16.

Generation of neuronal progenitor cells in response to tumors in the human brain.

Macas J, Ku MC, Nern C, Xu Y, Bühler H, Remke M, Synowitz M, Franz K, Seifert V, Plate KH, Kettenmann H, Glass R, Momma S.

Stem Cells. 2014 Jan;32(1):244-57. doi: 10.1002/stem.1581.

17.

Flow sorting and sequencing meadow fescue chromosome 4F.

Kopecký D, Martis M, Číhalíková J, Hřibová E, Vrána J, Bartoš J, Kopecká J, Cattonaro F, Stočes Š, Novák P, Neumann P, Macas J, Šimková H, Studer B, Asp T, Baird JH, Navrátil P, Karafiátová M, Kubaláková M, Šafář J, Mayer K, Doležel J.

Plant Physiol. 2013 Nov;163(3):1323-37. doi: 10.1104/pp.113.224105. Epub 2013 Oct 4.

18.

High-copy sequences reveal distinct evolution of the rye B chromosome.

Klemme S, Banaei-Moghaddam AM, Macas J, Wicker T, Novák P, Houben A.

New Phytol. 2013 Jul;199(2):550-8. doi: 10.1111/nph.12289. Epub 2013 Apr 24.

PMID:
23614816
19.

Contrasting patterns of transposable element and satellite distribution on sex chromosomes (XY1Y2) in the dioecious plant Rumex acetosa.

Steflova P, Tokan V, Vogel I, Lexa M, Macas J, Novak P, Hobza R, Vyskot B, Kejnovsky E.

Genome Biol Evol. 2013;5(4):769-82. doi: 10.1093/gbe/evt049.

20.

Diploidization and genome size change in allopolyploids is associated with differential dynamics of low- and high-copy sequences.

Renny-Byfield S, Kovarik A, Kelly LJ, Macas J, Novak P, Chase MW, Nichols RA, Pancholi MR, Grandbastien MA, Leitch AR.

Plant J. 2013 Jun;74(5):829-39. doi: 10.1111/tpj.12168. Epub 2013 Apr 5.

PMID:
23517128
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