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Results: 1 to 20 of 35

1.

A high-resolution whole-genome map of the distinctive epigenomic landscape induced by butyrate in bovine cells.

Shin JH, Xu L, Li RW, Gao Y, Bickhart D, Liu GE, Baldwin R, Li CJ.

Anim Genet. 2014 Jul 2. doi: 10.1111/age.12147. [Epub ahead of print]

PMID:
24990294
[PubMed - as supplied by publisher]
2.

A genome-wide survey reveals a deletion polymorphism associated with resistance to gastrointestinal nematodes in Angus cattle.

Xu L, Hou Y, Bickhart DM, Song J, Van Tassell CP, Sonstegard TS, Liu GE.

Funct Integr Genomics. 2014 Jun;14(2):333-9. doi: 10.1007/s10142-014-0371-6. Epub 2014 Apr 10.

PMID:
24718732
[PubMed - in process]
3.

Transcriptional profiling of mammary gland in Holstein cows with extremely different milk protein and fat percentage using RNA sequencing.

Cui X, Hou Y, Yang S, Xie Y, Zhang S, Zhang Y, Zhang Q, Lu X, Liu GE, Sun D.

BMC Genomics. 2014 Mar 24;15:226. doi: 10.1186/1471-2164-15-226.

PMID:
24655368
[PubMed - in process]
Free PMC Article
4.

The challenges and importance of structural variation detection in livestock.

Bickhart DM, Liu GE.

Front Genet. 2014 Feb 18;5:37. doi: 10.3389/fgene.2014.00037. eCollection 2014. Review.

PMID:
24600474
[PubMed]
Free PMC Article
5.

Assessing signatures of selection through variation in linkage disequilibrium between taurine and indicine cattle.

Pérez O'Brien AM, Utsunomiya YT, Mészáros G, Bickhart DM, Liu GE, Van Tassell CP, Sonstegard TS, Da Silva MV, Garcia JF, Sölkner J.

Genet Sel Evol. 2014 Mar 4;46:19. doi: 10.1186/1297-9686-46-19.

PMID:
24592996
[PubMed - in process]
Free PMC Article
6.

Genomic divergence of zebu and taurine cattle identified through high-density SNP genotyping.

Porto-Neto LR, Sonstegard TS, Liu GE, Bickhart DM, Da Silva MV, Machado MA, Utsunomiya YT, Garcia JF, Gondro C, Van Tassell CP.

BMC Genomics. 2013 Dec 13;14:876. doi: 10.1186/1471-2164-14-876.

PMID:
24330634
[PubMed - in process]
Free PMC Article
7.

Butyrate Induced IGF2 Activation Correlated with Distinct Chromatin Signatures Due to Histone Modification.

Shin JH, Li RW, Gao Y, Bickhart DM, Liu GE, Li W, Wu S, Li CJ.

Gene Regul Syst Bio. 2013 Mar 26;7:57-70. doi: 10.4137/GRSB.S11243. Print 2013.

PMID:
23645985
[PubMed]
Free PMC Article
8.

Fine mapping for Weaver syndrome in Brown Swiss cattle and the identification of 41 concordant mutations across NRCAM, PNPLA8 and CTTNBP2.

McClure M, Kim E, Bickhart D, Null D, Cooper T, Cole J, Wiggans G, Ajmone-Marsan P, Colli L, Santus E, Liu GE, Schroeder S, Matukumalli L, Van Tassell C, Sonstegard T.

PLoS One. 2013;8(3):e59251. doi: 10.1371/journal.pone.0059251. Epub 2013 Mar 20.

PMID:
23527149
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

Identification of candidate transcription factor binding sites in the cattle genome.

Bickhart DM, Liu GE.

Genomics Proteomics Bioinformatics. 2013 Jun;11(3):195-8. doi: 10.1016/j.gpb.2012.10.004. Epub 2013 Feb 1.

PMID:
23433959
[PubMed - indexed for MEDLINE]
Free Article
10.

Analysis of copy number variations in Holstein cows identify potential mechanisms contributing to differences in residual feed intake.

Hou Y, Bickhart DM, Chung H, Hutchison JL, Norman HD, Connor EE, Liu GE.

Funct Integr Genomics. 2012 Nov;12(4):717-23. doi: 10.1007/s10142-012-0295-y. Epub 2012 Sep 19.

PMID:
22991089
[PubMed - indexed for MEDLINE]
11.

Fine mapping of copy number variations on two cattle genome assemblies using high density SNP array.

Hou Y, Bickhart DM, Hvinden ML, Li C, Song J, Boichard DA, Fritz S, Eggen A, DeNise S, Wiggans GR, Sonstegard TS, Van Tassell CP, Liu GE.

BMC Genomics. 2012 Aug 6;13:376. doi: 10.1186/1471-2164-13-376.

PMID:
22866901
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

Copy number variation in the cattle genome.

Liu GE, Bickhart DM.

Funct Integr Genomics. 2012 Nov;12(4):609-24. doi: 10.1007/s10142-012-0289-9. Epub 2012 Jul 13. Review.

PMID:
22790923
[PubMed - indexed for MEDLINE]
13.

Copy number variation of individual cattle genomes using next-generation sequencing.

Bickhart DM, Hou Y, Schroeder SG, Alkan C, Cardone MF, Matukumalli LK, Song J, Schnabel RD, Ventura M, Taylor JF, Garcia JF, Van Tassell CP, Sonstegard TS, Eichler EE, Liu GE.

Genome Res. 2012 Apr;22(4):778-90. doi: 10.1101/gr.133967.111. Epub 2012 Feb 2.

PMID:
22300768
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

Refinement of Bos taurus sequence assembly based on BAC-FISH experiments.

Partipilo G, D'Addabbo P, Lacalandra GM, Liu GE, Rocchi M.

BMC Genomics. 2011 Dec 30;12:639. doi: 10.1186/1471-2164-12-639.

PMID:
22208360
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

Genomic regions showing copy number variations associate with resistance or susceptibility to gastrointestinal nematodes in Angus cattle.

Hou Y, Liu GE, Bickhart DM, Matukumalli LK, Li C, Song J, Gasbarre LC, Van Tassell CP, Sonstegard TS.

Funct Integr Genomics. 2012 Mar;12(1):81-92. doi: 10.1007/s10142-011-0252-1. Epub 2011 Sep 18.

PMID:
21928070
[PubMed - indexed for MEDLINE]
16.

Recent applications of DNA sequencing technologies in food, nutrition and agriculture.

Liu GE.

Recent Pat Food Nutr Agric. 2011 Sep;3(3):187-95. Review.

PMID:
21854355
[PubMed - indexed for MEDLINE]
17.

Assessment of genome integrity with array CGH in cattle transgenic cell lines produced by homologous recombination and somatic cell cloning.

Liu GE, Hou Y, Robl JM, Kuroiwa Y, Wang Z.

Genome Integr. 2011 May 23;2(1):6. doi: 10.1186/2041-9414-2-6.

PMID:
21605421
[PubMed]
Free PMC Article
18.

Genomic characteristics of cattle copy number variations.

Hou Y, Liu GE, Bickhart DM, Cardone MF, Wang K, Kim ES, Matukumalli LK, Ventura M, Song J, VanRaden PM, Sonstegard TS, Van Tassell CP.

BMC Genomics. 2011 Feb 23;12:127. doi: 10.1186/1471-2164-12-127.

PMID:
21345189
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

Initial analysis of copy number variations in cattle selected for resistance or susceptibility to intestinal nematodes.

Liu GE, Brown T, Hebert DA, Cardone MF, Hou Y, Choudhary RK, Shaffer J, Amazu C, Connor EE, Ventura M, Gasbarre LC.

Mamm Genome. 2011 Feb;22(1-2):111-21. doi: 10.1007/s00335-010-9308-0. Epub 2010 Dec 3.

PMID:
21125402
[PubMed - indexed for MEDLINE]
20.

Analysis of copy number variations among diverse cattle breeds.

Liu GE, Hou Y, Zhu B, Cardone MF, Jiang L, Cellamare A, Mitra A, Alexander LJ, Coutinho LL, Dell'Aquila ME, Gasbarre LC, Lacalandra G, Li RW, Matukumalli LK, Nonneman D, Regitano LC, Smith TP, Song J, Sonstegard TS, Van Tassell CP, Ventura M, Eichler EE, McDaneld TG, Keele JW.

Genome Res. 2010 May;20(5):693-703. doi: 10.1101/gr.105403.110. Epub 2010 Mar 8.

PMID:
20212021
[PubMed - indexed for MEDLINE]
Free PMC Article

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