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Identifying the effect of patient sharing on between-hospital genetic differentiation of methicillin-resistant Staphylococcus aureus.

Chang HH, Dordel J, Donker T, Worby CJ, Feil EJ, Hanage WP, Bentley SD, Huang SS, Lipsitch M.

Genome Med. 2016 Feb 13;8(1):18. doi: 10.1186/s13073-016-0274-3.


Infective endocarditis and cancer in the elderly.

García-Albéniz X, Hsu J, Lipsitch M, Logan RW, Hernández-Díaz S, Hernán MA.

Eur J Epidemiol. 2016 Jan;31(1):41-9. doi: 10.1007/s10654-015-0111-9. Epub 2015 Dec 18.


Impact of Host Heterogeneity on the Efficacy of Interventions to Reduce Staphylococcus aureus Carriage.

Chang Q, Lipsitch M, Hanage WP.

Infect Control Hosp Epidemiol. 2016 Feb;37(2):197-204. doi: 10.1017/ice.2015.269. Epub 2015 Nov 24.


Population genomic datasets describing the post-vaccine evolutionary epidemiology of Streptococcus pneumoniae.

Croucher NJ, Finkelstein JA, Pelton SI, Parkhill J, Bentley SD, Lipsitch M, Hanage WP.

Sci Data. 2015 Oct 27;2:150058. doi: 10.1038/sdata.2015.58. eCollection 2015.


Improving Control of Antibiotic-Resistant Gonorrhea by Integrating Research Agendas Across Disciplines: Key Questions Arising From Mathematical Modeling.

Grad YH, Goldstein E, Lipsitch M, White PJ.

J Infect Dis. 2016 Mar 15;213(6):883-90. doi: 10.1093/infdis/jiv517. Epub 2015 Oct 30. Review.


Infectious Diseases Society of America and Gain-of-Function Experiments With Pathogens Having Pandemic Potential.

Frank GM, Adalja A, Barbour A, Casadevall A, Dormitzer PR, Duchin J, Hayden FG, Hirsch MS, Hynes NA, Lipsitch M, Pavia AT, Relman DA.

J Infect Dis. 2016 May 1;213(9):1359-61. doi: 10.1093/infdis/jiv474. Epub 2015 Sep 27. No abstract available.


Effect of Serotype on Pneumococcal Competition in a Mouse Colonization Model.

Trzciński K, Li Y, Weinberger DM, Thompson CM, Cordy D, Bessolo A, Malley R, Lipsitch M.

MBio. 2015 Sep 15;6(5):e00902-15. doi: 10.1128/mBio.00902-15.


Calls for caution in genome engineering should be a model for similar dialogue on pandemic pathogen research.

Lipsitch M, Esvelt K, Inglesby T.

Ann Intern Med. 2015 Nov 17;163(10):790-1. doi: 10.7326/M15-1048. Epub 2015 Sep 8. No abstract available.


The ethics of biosafety considerations in gain-of-function research resulting in the creation of potential pandemic pathogens.

Evans NG, Lipsitch M, Levinson M.

J Med Ethics. 2015 Nov;41(11):901-8. doi: 10.1136/medethics-2014-102619. Epub 2015 Aug 28.


Examining the role of different age groups, and of vaccination during the 2012 Minnesota pertussis outbreak.

Worby CJ, Kenyon C, Lynfield R, Lipsitch M, Goldstein E.

Sci Rep. 2015 Aug 17;5:13182. doi: 10.1038/srep13182.


Potential Biases in Estimating Absolute and Relative Case-Fatality Risks during Outbreaks.

Lipsitch M, Donnelly CA, Fraser C, Blake IM, Cori A, Dorigatti I, Ferguson NM, Garske T, Mills HL, Riley S, Van Kerkhove MD, Hernán MA.

PLoS Negl Trop Dis. 2015 Jul 16;9(7):e0003846. doi: 10.1371/journal.pntd.0003846. eCollection 2015. Review.


On the relative role of different age groups in influenza epidemics.

Worby CJ, Chaves SS, Wallinga J, Lipsitch M, Finelli L, Goldstein E.

Epidemics. 2015 Dec;13:10-16.


Estimating the hospitalization burden associated with influenza and respiratory syncytial virus in New York City, 2003-2011.

Goldstein E, Greene SK, Olson DR, Hanage WP, Lipsitch M.

Influenza Other Respir Viruses. 2015 Sep;9(5):225-33. doi: 10.1111/irv.12325.


Identification of pneumococcal colonization determinants in the stringent response pathway facilitated by genomic diversity.

Li Y, Croucher NJ, Thompson CM, Trzciński K, Hanage WP, Lipsitch M.

BMC Genomics. 2015 May 9;16:369. doi: 10.1186/s12864-015-1573-6.


Carriage burden, multiple colonization and antibiotic pressure promote emergence of resistant vaccine escape pneumococci.

Mitchell PK, Lipsitch M, Hanage WP.

Philos Trans R Soc Lond B Biol Sci. 2015 Jun 5;370(1670):20140342. doi: 10.1098/rstb.2014.0342.


How could preventive therapy affect the prevalence of drug resistance? Causes and consequences.

Kunkel A, Colijn C, Lipsitch M, Cohen T.

Philos Trans R Soc Lond B Biol Sci. 2015 Jun 5;370(1670):20140306. doi: 10.1098/rstb.2014.0306.


Stability of the pneumococcal population structure in Massachusetts as PCV13 was introduced.

Chang Q, Stevenson AE, Croucher NJ, Lee GM, Pelton SI, Lipsitch M, Finkelstein JA, Hanage WP.

BMC Infect Dis. 2015 Feb 18;15:68. doi: 10.1186/s12879-015-0797-z.


Antibiotics in agriculture and the risk to human health: how worried should we be?

Chang Q, Wang W, Regev-Yochay G, Lipsitch M, Hanage WP.

Evol Appl. 2015 Mar;8(3):240-7. doi: 10.1111/eva.12185. Epub 2014 Aug 2. Review.


Vaccine testing. Ebola and beyond.

Lipsitch M, Eyal N, Halloran ME, Hernán MA, Longini IM, Perencevich EN, Grais RF.

Science. 2015 Apr 3;348(6230):46-8. doi: 10.1126/science.aaa3178. No abstract available.


Selective and genetic constraints on pneumococcal serotype switching.

Croucher NJ, Kagedan L, Thompson CM, Parkhill J, Bentley SD, Finkelstein JA, Lipsitch M, Hanage WP.

PLoS Genet. 2015 Mar 31;11(3):e1005095. doi: 10.1371/journal.pgen.1005095. eCollection 2015 Mar.

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