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Litter Breakdown and Microbial Succession on Two Submerged Leaf Species in a Small Forested Stream.

Newman MM, Liles MR, Feminella JW.

PLoS One. 2015 Jun 22;10(6):e0130801. doi: 10.1371/journal.pone.0130801. eCollection 2015.


Draft Genome Sequence of Bacillus amyloliquefaciens AP183 with Antibacterial Activity against Methicillin-Resistant Staphylococcus aureus.

Nasrin S, Hossain MJ, Liles MR.

Genome Announc. 2015 Apr 16;3(2). pii: e00162-15. doi: 10.1128/genomeA.00162-15.


Aeromonas aquatica sp. nov., Aeromonas finlandiensis sp. nov. and Aeromonas lacus sp. nov. isolated from Finnish waters associated with cyanobacterial blooms.

Beaz-Hidalgo R, Latif-Eugenín F, Hossain MJ, Berg K, Niemi RM, Rapala J, Lyra C, Liles MR, Figueras MJ.

Syst Appl Microbiol. 2015 May;38(3):161-8. doi: 10.1016/j.syapm.2015.02.005. Epub 2015 Mar 20.


Bacillusin A, an Antibacterial Macrodiolide from Bacillus amyloliquefaciens AP183.

Ravu RR, Jacob MR, Chen X, Wang M, Nasrin S, Kloepper JW, Liles MR, Mead DA, Khan IA, Li XC.

J Nat Prod. 2015 Apr 24;78(4):924-8. doi: 10.1021/np500911k. Epub 2015 Mar 10.


Strategies to avoid wrongly labelled genomes using as example the detected wrong taxonomic affiliation for aeromonas genomes in the GenBank database.

Beaz-Hidalgo R, Hossain MJ, Liles MR, Figueras MJ.

PLoS One. 2015 Jan 21;10(1):e0115813. doi: 10.1371/journal.pone.0115813. eCollection 2015.


Taxonomic affiliation of new genomes should be verified using average nucleotide identity and multilocus phylogenetic analysis.

Figueras MJ, Beaz-Hidalgo R, Hossain MJ, Liles MR.

Genome Announc. 2014 Dec 4;2(6). pii: e00927-14. doi: 10.1128/genomeA.00927-14.


Draft genome sequences of two novel Aeromonas species recovered in association with cyanobacterial blooms.

Hossain MJ, Beaz-Hidalgo R, Figueras MJ, Liles MR.

Genome Announc. 2014 Nov 20;2(6). pii: e01181-14. doi: 10.1128/genomeA.01181-14.


Three novel virophage genomes discovered from Yellowstone Lake metagenomes.

Zhou J, Sun D, Childers A, McDermott TR, Wang Y, Liles MR.

J Virol. 2015 Jan 15;89(2):1278-85. doi: 10.1128/JVI.03039-14. Epub 2014 Nov 12.


A novel thermostable polymerase for RNA and DNA loop-mediated isothermal amplification (LAMP).

Chander Y, Koelbl J, Puckett J, Moser MJ, Klingele AJ, Liles MR, Carrias A, Mead DA, Schoenfeld TW.

Front Microbiol. 2014 Aug 1;5:395. doi: 10.3389/fmicb.2014.00395. eCollection 2014.


An Asian origin of virulent Aeromonas hydrophila responsible for disease epidemics in United States-farmed catfish.

Hossain MJ, Sun D, McGarey DJ, Wrenn S, Alexander LM, Martino ME, Xing Y, Terhune JS, Liles MR.

MBio. 2014 Jun 3;5(3):e00848-14. doi: 10.1128/mBio.00848-14.


Implication of lateral genetic transfer in the emergence of Aeromonas hydrophila isolates of epidemic outbreaks in channel catfish.

Hossain MJ, Waldbieser GC, Sun D, Capps NK, Hemstreet WB, Carlisle K, Griffin MJ, Khoo L, Goodwin AE, Sonstegard TS, Schroeder S, Hayden K, Newton JC, Terhune JS, Liles MR.

PLoS One. 2013 Nov 20;8(11):e80943. doi: 10.1371/journal.pone.0080943. eCollection 2013.


Microbial community analysis of Deepwater Horizon oil-spill impacted sites along the Gulf coast using functional and phylogenetic markers.

Looper JK, Cotto A, Kim BY, Lee MK, Liles MR, Ní Chadhain SM, Son A.

Environ Sci Process Impacts. 2013 Oct;15(11):2068-79. doi: 10.1039/c3em00200d.


Complete Genome Sequence of a Channel Catfish Epidemic Isolate, Aeromonas hydrophila Strain ML09-119.

Tekedar HC, Waldbieser GC, Karsi A, Liles MR, Griffin MJ, Vamenta S, Sonstegard T, Hossain M, Schroeder SG, Khoo L, Lawrence ML.

Genome Announc. 2013 Sep 19;1(5). pii: e00755-13. doi: 10.1128/genomeA.00755-13.


Complete Genome Sequence of Staphylococcus aureus Tager 104, a Sequence Type 49 Ancestor.

Davis R, Hossain MJ, Liles MR, Panizzi P.

Genome Announc. 2013 Sep 12;1(5). pii: e00706-13. doi: 10.1128/genomeA.00706-13.


Secreted pyomelanin of Legionella pneumophila promotes bacterial iron uptake and growth under iron-limiting conditions.

Zheng H, Chatfield CH, Liles MR, Cianciotto NP.

Infect Immun. 2013 Nov;81(11):4182-91. doi: 10.1128/IAI.00858-13. Epub 2013 Aug 26.


Meeting report: 1st international functional metagenomics workshop may 7-8, 2012, st. Jacobs, ontario, Canada.

Engel K, Ashby D, Brady SF, Cowan DA, Doemer J, Edwards EA, Fiebig K, Martens EC, McCormac D, Mead DA, Miyazaki K, Moreno-Hagelsieb G, O'Gara F, Reid A, Rose DR, Simonet P, Sjöling S, Smalla K, Streit WR, Tedman-Jones J, Valla S, Wellington EM, Wu CC, Liles MR, Neufeld JD, Sessitsch A, Charles TC.

Stand Genomic Sci. 2013 Apr 15;8(1):106-11. doi: 10.4056/sigs.3406845. eCollection 2013 Apr 15.


Rapid quantitative detection of Aeromonas hydrophila strains associated with disease outbreaks in catfish aquaculture.

Griffin MJ, Goodwin AE, Merry GE, Liles MR, Williams MA, Ware C, Waldbieser GC.

J Vet Diagn Invest. 2013 Jul;25(4):473-81. doi: 10.1177/1040638713494210.


Identification of Bacillus strains for biological control of catfish pathogens.

Ran C, Carrias A, Williams MA, Capps N, Dan BC, Newton JC, Kloepper JW, Ooi EL, Browdy CL, Terhune JS, Liles MR.

PLoS One. 2012;7(9):e45793. doi: 10.1371/journal.pone.0045793. Epub 2012 Sep 21.


Macroalgal extracts induce bacterial assemblage shifts and sublethal tissue stress in Caribbean corals.

Morrow KM, Ritson-Williams R, Ross C, Liles MR, Paul VJ.

PLoS One. 2012;7(9):e44859. doi: 10.1371/journal.pone.0044859. Epub 2012 Sep 13.


Bacterial associates of two Caribbean coral species reveal species-specific distribution and geographic variability.

Morrow KM, Moss AG, Chadwick NE, Liles MR.

Appl Environ Microbiol. 2012 Sep;78(18):6438-49. doi: 10.1128/AEM.01162-12. Epub 2012 Jul 6.

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