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Items: 1 to 20 of 58

1.

Draft Genome Sequence of Aeromonas hydrophila TN97-08.

Tekedar HC, Kumru S, Karsi A, Waldbieser GC, Sonstegard T, Schroeder SG, Liles MR, Griffin MJ, Lawrence ML.

Genome Announc. 2016 May 26;4(3). pii: e00436-16. doi: 10.1128/genomeA.00436-16.

2.

Complete genome of Staphylococcus aureus Tager 104 provides evidence of its relation to modern systemic hospital-acquired strains.

Davis RW 4th, Brannen AD, Hossain MJ, Monsma S, Bock PE, Nahrendorf M, Mead D, Lodes M, Liles MR, Panizzi P.

BMC Genomics. 2016 Mar 3;17(1):179. doi: 10.1186/s12864-016-2433-8.

3.

Changes in rhizosphere bacterial gene expression following glyphosate treatment.

Newman MM, Lorenz N, Hoilett N, Lee NR, Dick RP, Liles MR, Ramsier C, Kloepper JW.

Sci Total Environ. 2016 May 15;553:32-41. doi: 10.1016/j.scitotenv.2016.02.078. Epub 2016 Feb 21.

4.

Complete Genome Sequence of Streptomyces sp. Strain CCM_MD2014, Isolated from Topsoil in Woods Hole, Massachusetts.

Mariita RM, Bhatnagar S, Hanselmann K, Hossain MJ, Korlach J, Boitano M, Roberts RJ, Liles MR, Moss AG, Leadbetter JR, Newman DK, Dawson SC.

Genome Announc. 2015 Dec 31;3(6). pii: e01506-15. doi: 10.1128/genomeA.01506-15.

5.

Complete Genome Sequence of Curtobacterium sp. Strain MR_MD2014, Isolated from Topsoil in Woods Hole, Massachusetts.

Mariita RM, Bhatnagar S, Hanselmann K, Hossain MJ, Korlach J, Boitano M, Roberts RJ, Liles MR, Moss AG, Leadbetter JR, Newman DK, Dawson SC.

Genome Announc. 2015 Dec 31;3(6). pii: e01504-15. doi: 10.1128/genomeA.01504-15.

6.

Glyphosate effects on soil rhizosphere-associated bacterial communities.

Newman MM, Hoilett N, Lorenz N, Dick RP, Liles MR, Ramsier C, Kloepper JW.

Sci Total Environ. 2016 Feb 1;543(Pt A):155-60. doi: 10.1016/j.scitotenv.2015.11.008. Epub 2015 Nov 12.

7.

Effect of Clostridium perfringens infection and antibiotic administration on microbiota in the small intestine of broiler chickens.

Fasina YO, Newman MM, Stough JM, Liles MR.

Poult Sci. 2016 Feb;95(2):247-60. doi: 10.3382/ps/pev329. Epub 2015 Nov 13.

PMID:
26567176
8.

Deciphering the conserved genetic loci implicated in plant disease control through comparative genomics of Bacillus amyloliquefaciens subsp. plantarum.

Hossain MJ, Ran C, Liu K, Ryu CM, Rasmussen-Ivey CR, Williams MA, Hassan MK, Choi SK, Jeong H, Newman M, Kloepper JW, Liles MR.

Front Plant Sci. 2015 Aug 17;6:631. doi: 10.3389/fpls.2015.00631. eCollection 2015.

9.

Litter Breakdown and Microbial Succession on Two Submerged Leaf Species in a Small Forested Stream.

Newman MM, Liles MR, Feminella JW.

PLoS One. 2015 Jun 22;10(6):e0130801. doi: 10.1371/journal.pone.0130801. eCollection 2015.

10.

Draft Genome Sequence of Bacillus amyloliquefaciens AP183 with Antibacterial Activity against Methicillin-Resistant Staphylococcus aureus.

Nasrin S, Hossain MJ, Liles MR.

Genome Announc. 2015 Apr 16;3(2). pii: e00162-15. doi: 10.1128/genomeA.00162-15.

11.

Aeromonas aquatica sp. nov., Aeromonas finlandiensis sp. nov. and Aeromonas lacus sp. nov. isolated from Finnish waters associated with cyanobacterial blooms.

Beaz-Hidalgo R, Latif-Eugenín F, Hossain MJ, Berg K, Niemi RM, Rapala J, Lyra C, Liles MR, Figueras MJ.

Syst Appl Microbiol. 2015 May;38(3):161-8. doi: 10.1016/j.syapm.2015.02.005. Epub 2015 Mar 20.

PMID:
25852023
12.

Bacillusin A, an Antibacterial Macrodiolide from Bacillus amyloliquefaciens AP183.

Ravu RR, Jacob MR, Chen X, Wang M, Nasrin S, Kloepper JW, Liles MR, Mead DA, Khan IA, Li XC.

J Nat Prod. 2015 Apr 24;78(4):924-8. doi: 10.1021/np500911k. Epub 2015 Mar 10.

PMID:
25756620
13.

Strategies to avoid wrongly labelled genomes using as example the detected wrong taxonomic affiliation for aeromonas genomes in the GenBank database.

Beaz-Hidalgo R, Hossain MJ, Liles MR, Figueras MJ.

PLoS One. 2015 Jan 21;10(1):e0115813. doi: 10.1371/journal.pone.0115813. eCollection 2015.

14.

Taxonomic affiliation of new genomes should be verified using average nucleotide identity and multilocus phylogenetic analysis.

Figueras MJ, Beaz-Hidalgo R, Hossain MJ, Liles MR.

Genome Announc. 2014 Dec 4;2(6). pii: e00927-14. doi: 10.1128/genomeA.00927-14.

15.

Draft genome sequences of two novel Aeromonas species recovered in association with cyanobacterial blooms.

Hossain MJ, Beaz-Hidalgo R, Figueras MJ, Liles MR.

Genome Announc. 2014 Nov 20;2(6). pii: e01181-14. doi: 10.1128/genomeA.01181-14.

16.

Three novel virophage genomes discovered from Yellowstone Lake metagenomes.

Zhou J, Sun D, Childers A, McDermott TR, Wang Y, Liles MR.

J Virol. 2015 Jan 15;89(2):1278-85. doi: 10.1128/JVI.03039-14. Epub 2014 Nov 12.

17.

A novel thermostable polymerase for RNA and DNA loop-mediated isothermal amplification (LAMP).

Chander Y, Koelbl J, Puckett J, Moser MJ, Klingele AJ, Liles MR, Carrias A, Mead DA, Schoenfeld TW.

Front Microbiol. 2014 Aug 1;5:395. doi: 10.3389/fmicb.2014.00395. eCollection 2014.

18.

An Asian origin of virulent Aeromonas hydrophila responsible for disease epidemics in United States-farmed catfish.

Hossain MJ, Sun D, McGarey DJ, Wrenn S, Alexander LM, Martino ME, Xing Y, Terhune JS, Liles MR.

MBio. 2014 Jun 3;5(3):e00848-14. doi: 10.1128/mBio.00848-14.

19.

Implication of lateral genetic transfer in the emergence of Aeromonas hydrophila isolates of epidemic outbreaks in channel catfish.

Hossain MJ, Waldbieser GC, Sun D, Capps NK, Hemstreet WB, Carlisle K, Griffin MJ, Khoo L, Goodwin AE, Sonstegard TS, Schroeder S, Hayden K, Newton JC, Terhune JS, Liles MR.

PLoS One. 2013 Nov 20;8(11):e80943. doi: 10.1371/journal.pone.0080943. eCollection 2013.

20.

Microbial community analysis of Deepwater Horizon oil-spill impacted sites along the Gulf coast using functional and phylogenetic markers.

Looper JK, Cotto A, Kim BY, Lee MK, Liles MR, Ní Chadhain SM, Son A.

Environ Sci Process Impacts. 2013 Oct;15(11):2068-79. doi: 10.1039/c3em00200d.

PMID:
24061682
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