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Items: 1 to 20 of 177

1.

Corrigendum: Genome-wide adaptive complexes to underground stresses in blind mole rats Spalax.

Fang X, Nevo E, Han L, Levanon EY, Zhao J, Avivi A, Larkin D, Jiang X, Feranchuk S, Zhu Y, Fishman A, Feng Y, Sher N, Xiong Z, Hankeln T, Huang Z, Gorbunova V, Zhang L, Zhao W, Wildman DE, Xiong Y, Gudkov A, Zheng Q, Rechavi G, Liu S, Bazak L, Chen J, Knisbacher BA, Lu Y, Shams I, Gajda K, Farré M, Kim J, Lewin HA, Ma J, Band M, Bicker A, Kranz A, Mattheus T, Schmidt H, Seluanov A, Azpurua J, McGowen MR, Ben Jacob E, Li K, Peng S, Zhu X, Liao X, Li S, Krogh A, Zhou X, Brodsky L, Wang J.

Nat Commun. 2015 Aug 12;6:8051. doi: 10.1038/ncomms9051. No abstract available.

PMID:
26264976
2.

Genome-wide adaptive complexes to underground stresses in blind mole rats Spalax.

Fang X, Nevo E, Han L, Levanon EY, Zhao J, Avivi A, Larkin D, Jiang X, Feranchuk S, Zhu Y, Fishman A, Feng Y, Sher N, Xiong Z, Hankeln T, Huang Z, Gorbunova V, Zhang L, Zhao W, Wildman DE, Xiong Y, Gudkov A, Zheng Q, Rechavi G, Liu S, Bazak L, Chen J, Knisbacher BA, Lu Y, Shams I, Gajda K, Farré M, Kim J, Lewin HA, Ma J, Band M, Bicker A, Kranz A, Mattheus T, Schmidt H, Seluanov A, Azpurua J, McGowen MR, Ben Jacob E, Li K, Peng S, Zhu X, Liao X, Li S, Krogh A, Zhou X, Brodsky L, Wang J.

Nat Commun. 2014 Jun 3;5:3966. doi: 10.1038/ncomms4966. Erratum in: Nat Commun. 2015;6:8051.

PMID:
24892994
3.

Memories of Carl from an improbable friend.

Lewin HA.

RNA Biol. 2014;11(3):273-8. doi: 10.4161/rna.28866. Epub 2014 Apr 14. Review. No abstract available. Erratum in: RNA Biol. 2014;11(6):788.

4.

Postpartal subclinical endometritis alters transcriptome profiles in liver and adipose tissue of dairy cows.

Akbar H, Cardoso FC, Meier S, Burke C, McDougall S, Mitchell M, Walker C, Rodriguez-Zas SL, Everts RE, Lewin HA, Roche JR, Loor JJ.

Bioinform Biol Insights. 2014 Feb 19;8:45-63. doi: 10.4137/BBI.S13735. eCollection 2014.

5.

Systems biology analysis of Brucella infected Peyer's patch reveals rapid invasion with modest transient perturbations of the host transcriptome.

Rossetti CA, Drake KL, Siddavatam P, Lawhon SD, Nunes JE, Gull T, Khare S, Everts RE, Lewin HA, Adams LG.

PLoS One. 2013 Dec 9;8(12):e81719. doi: 10.1371/journal.pone.0081719. eCollection 2013.

6.

Changes in WNT signaling-related gene expression associated with development and cloning in bovine extra-embryonic and endometrial tissues during the peri-implantation period.

Biase FH, Rabel C, Guillomot M, Sandra O, Andropolis K, Olmstead C, Oliveira R, Wallace R, Le Bourhis D, Richard C, Campion E, Chaulot-Talmon A, Giraud-Delville C, Taghouti G, Jammes H, Hue I, Renard JP, Lewin HA.

Mol Reprod Dev. 2013 Dec;80(12):977-87. doi: 10.1002/mrd.22257. Epub 2013 Oct 17.

PMID:
24038527
7.

Bioinformatics analysis of transcriptome dynamics during growth in angus cattle longissimus muscle.

Moisá SJ, Shike DW, Graugnard DE, Rodriguez-Zas SL, Everts RE, Lewin HA, Faulkner DB, Berger LL, Loor JJ.

Bioinform Biol Insights. 2013 Aug 4;7:253-70. doi: 10.4137/BBI.S12328. eCollection 2013.

8.

Inferring demography from runs of homozygosity in whole-genome sequence, with correction for sequence errors.

MacLeod IM, Larkin DM, Lewin HA, Hayes BJ, Goddard ME.

Mol Biol Evol. 2013 Sep;30(9):2209-23. doi: 10.1093/molbev/mst125. Epub 2013 Jul 10.

9.

Draft genome sequence of the Tibetan antelope.

Ge RL, Cai Q, Shen YY, San A, Ma L, Zhang Y, Yi X, Chen Y, Yang L, Huang Y, He R, Hui Y, Hao M, Li Y, Wang B, Ou X, Xu J, Zhang Y, Wu K, Geng C, Zhou W, Zhou T, Irwin DM, Yang Y, Ying L, Bao H, Kim J, Larkin DM, Ma J, Lewin HA, Xing J, Platt RN 2nd, Ray DA, Auvil L, Capitanu B, Zhang X, Zhang G, Murphy RW, Wang J, Zhang YP, Wang J.

Nat Commun. 2013;4:1858. doi: 10.1038/ncomms2860.

10.

Feed restriction, but not l-carnitine infusion, alters the liver transcriptome by inhibiting sterol synthesis and mitochondrial oxidative phosphorylation and increasing gluconeogenesis in mid-lactation dairy cows.

Akbar H, Bionaz M, Carlson DB, Rodriguez-Zas SL, Everts RE, Lewin HA, Drackley JK, Loor JJ.

J Dairy Sci. 2013 Apr;96(4):2201-13. doi: 10.3168/jds.2012-6036. Epub 2013 Feb 22.

PMID:
23462174
11.

Reference-assisted chromosome assembly.

Kim J, Larkin DM, Cai Q, Asan, Zhang Y, Ge RL, Auvil L, Capitanu B, Zhang G, Lewin HA, Ma J.

Proc Natl Acad Sci U S A. 2013 Jan 29;110(5):1785-90. doi: 10.1073/pnas.1220349110. Epub 2013 Jan 10.

12.

The future of livestock breeding: genomic selection for efficiency, reduced emissions intensity, and adaptation.

Hayes BJ, Lewin HA, Goddard ME.

Trends Genet. 2013 Apr;29(4):206-14. doi: 10.1016/j.tig.2012.11.009. Epub 2012 Dec 19. Review.

PMID:
23261029
13.

Analyses of pig genomes provide insight into porcine demography and evolution.

Groenen MA, Archibald AL, Uenishi H, Tuggle CK, Takeuchi Y, Rothschild MF, Rogel-Gaillard C, Park C, Milan D, Megens HJ, Li S, Larkin DM, Kim H, Frantz LA, Caccamo M, Ahn H, Aken BL, Anselmo A, Anthon C, Auvil L, Badaoui B, Beattie CW, Bendixen C, Berman D, Blecha F, Blomberg J, Bolund L, Bosse M, Botti S, Bujie Z, Bystrom M, Capitanu B, Carvalho-Silva D, Chardon P, Chen C, Cheng R, Choi SH, Chow W, Clark RC, Clee C, Crooijmans RP, Dawson HD, Dehais P, De Sapio F, Dibbits B, Drou N, Du ZQ, Eversole K, Fadista J, Fairley S, Faraut T, Faulkner GJ, Fowler KE, Fredholm M, Fritz E, Gilbert JG, Giuffra E, Gorodkin J, Griffin DK, Harrow JL, Hayward A, Howe K, Hu ZL, Humphray SJ, Hunt T, Hornshøj H, Jeon JT, Jern P, Jones M, Jurka J, Kanamori H, Kapetanovic R, Kim J, Kim JH, Kim KW, Kim TH, Larson G, Lee K, Lee KT, Leggett R, Lewin HA, Li Y, Liu W, Loveland JE, Lu Y, Lunney JK, Ma J, Madsen O, Mann K, Matthews L, McLaren S, Morozumi T, Murtaugh MP, Narayan J, Nguyen DT, Ni P, Oh SJ, Onteru S, Panitz F, Park EW, Park HS, Pascal G, Paudel Y, Perez-Enciso M, Ramirez-Gonzalez R, Reecy JM, Rodriguez-Zas S, Rohrer GA, Rund L, Sang Y, Schachtschneider K, Schraiber JG, Schwartz J, Scobie L, Scott C, Searle S, Servin B, Southey BR, Sperber G, Stadler P, Sweedler JV, Tafer H, Thomsen B, Wali R, Wang J, Wang J, White S, Xu X, Yerle M, Zhang G, Zhang J, Zhang J, Zhao S, Rogers J, Churcher C, Schook LB.

Nature. 2012 Nov 15;491(7424):393-8. doi: 10.1038/nature11622.

14.

Systems biology analysis of gene expression during in vivo Mycobacterium avium paratuberculosis enteric colonization reveals role for immune tolerance.

Khare S, Lawhon SD, Drake KL, Nunes JE, Figueiredo JF, Rossetti CA, Gull T, Everts RE, Lewin HA, Galindo CL, Garner HR, Adams LG.

PLoS One. 2012;7(8):e42127. doi: 10.1371/journal.pone.0042127. Epub 2012 Aug 17.

15.

The yak genome and adaptation to life at high altitude.

Qiu Q, Zhang G, Ma T, Qian W, Wang J, Ye Z, Cao C, Hu Q, Kim J, Larkin DM, Auvil L, Capitanu B, Ma J, Lewin HA, Qian X, Lang Y, Zhou R, Wang L, Wang K, Xia J, Liao S, Pan S, Lu X, Hou H, Wang Y, Zang X, Yin Y, Ma H, Zhang J, Wang Z, Zhang Y, Zhang D, Yonezawa T, Hasegawa M, Zhong Y, Liu W, Zhang Y, Huang Z, Zhang S, Long R, Yang H, Wang J, Lenstra JA, Cooper DN, Wu Y, Wang J, Shi P, Wang J, Liu J.

Nat Genet. 2012 Jul 1;44(8):946-9. doi: 10.1038/ng.2343.

PMID:
22751099
16.

Uncoupled embryonic and extra-embryonic tissues compromise blastocyst development after somatic cell nuclear transfer.

Degrelle SA, Jaffrezic F, Campion E, Lê Cao KA, Le Bourhis D, Richard C, Rodde N, Fleurot R, Everts RE, Lecardonnel J, Heyman Y, Vignon X, Yang X, Tian XC, Lewin HA, Renard JP, Hue I.

PLoS One. 2012;7(6):e38309. doi: 10.1371/journal.pone.0038309. Epub 2012 Jun 6.

17.

Comparative epigenomic annotation of regulatory DNA.

Xiao S, Xie D, Cao X, Yu P, Xing X, Chen CC, Musselman M, Xie M, West FD, Lewin HA, Wang T, Zhong S.

Cell. 2012 Jun 8;149(6):1381-92. doi: 10.1016/j.cell.2012.04.029.

18.

Level of nutrient intake affects mammary gland gene expression profiles in preweaned Holstein heifers.

Piantoni P, Daniels KM, Everts RE, Rodriguez-Zas SL, Lewin HA, Hurley WL, Akers RM, Loor JJ.

J Dairy Sci. 2012 May;95(5):2550-61. doi: 10.3168/jds.2011-4539.

PMID:
22541482
19.

Whole-genome resequencing of two elite sires for the detection of haplotypes under selection in dairy cattle.

Larkin DM, Daetwyler HD, Hernandez AG, Wright CL, Hetrick LA, Boucek L, Bachman SL, Band MR, Akraiko TV, Cohen-Zinder M, Thimmapuram J, Macleod IM, Harkins TT, McCague JE, Goddard ME, Hayes BJ, Lewin HA.

Proc Natl Acad Sci U S A. 2012 May 15;109(20):7693-8. doi: 10.1073/pnas.1114546109. Epub 2012 Apr 23.

20.

Old and new stories: revelations from functional analysis of the bovine mammary transcriptome during the lactation cycle.

Bionaz M, Periasamy K, Rodriguez-Zas SL, Everts RE, Lewin HA, Hurley WL, Loor JJ.

PLoS One. 2012;7(3):e33268. doi: 10.1371/journal.pone.0033268. Epub 2012 Mar 12.

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