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Results: 1 to 20 of 210

1.

BiQ Analyzer HiMod: an interactive software tool for high-throughput locus-specific analysis of 5-methylcytosine and its oxidized derivatives.

Becker D, Lutsik P, Ebert P, Bock C, Lengauer T, Walter J.

Nucleic Acids Res. 2014 Jul;42(Web Server issue):W501-7. doi: 10.1093/nar/gku457. Epub 2014 May 29.

PMID:
24875479
[PubMed - in process]
Free Article
2.

Personalized HIV therapy to control drug resistance.

Lengauer T, Pfeifer N, Kaiser R.

Drug Discov Today Technol. 2014 Mar;11:57-64. doi: 10.1016/j.ddtec.2014.02.004.

PMID:
24847654
[PubMed - in process]
Free Article
3.

Inferring short-range linkage information from sequencing chromatograms.

Beggel B, Neumann-Fraune M, Kaiser R, Verheyen J, Lengauer T.

PLoS One. 2013 Dec 20;8(12):e81687. doi: 10.1371/journal.pone.0081687. eCollection 2013.

PMID:
24376502
[PubMed - in process]
Free PMC Article
4.

Efficient computation of root mean square deviations under rigid transformations.

Hildebrandt AK, Dietzen M, Lengauer T, Lenhof HP, Althaus E, Hildebrandt A.

J Comput Chem. 2013 Dec 19. doi: 10.1002/jcc.23513. [Epub ahead of print]

PMID:
24356990
[PubMed - as supplied by publisher]
5.

Full genome ultra-deep pyrosequencing associates G-to-A hypermutation of the hepatitis B virus genome with the natural progression of hepatitis B.

Beggel B, Münk C, Däumer M, Hauck K, Häussinger D, Lengauer T, Erhardt A.

J Viral Hepat. 2013 Dec;20(12):882-9. doi: 10.1111/jvh.12110. Epub 2013 Jun 7.

PMID:
24304458
[PubMed - indexed for MEDLINE]
6.

Ambulatory care for HIV-infected patients: differences in outcomes between hospital-based units and private practices: analysis of the RESINA cohort.

Oette M, Reuter S, Kaiser R, Jensen B, Lengauer T, Fätkenheuer G, Knechten H, Hower M, Sagir A, Pfister H, Häussinger D; RESINA study group.

Eur J Med Res. 2013 Nov 21;18:48. doi: 10.1186/2047-783X-18-48.

PMID:
24262206
[PubMed - indexed for MEDLINE]
Free Article
7.

Modelling binding between CCR5 and CXCR4 receptors and their ligands suggests the surface electrostatic potential of the co-receptor to be a key player in the HIV-1 tropism.

Kalinina OV, Pfeifer N, Lengauer T.

Retrovirology. 2013 Nov 11;10:130. doi: 10.1186/1742-4690-10-130.

PMID:
24215935
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

[Importance of bioinformatics in personalised medicine].

Lengauer T.

Bundesgesundheitsblatt Gesundheitsforschung Gesundheitsschutz. 2013 Nov;56(11):1489-94. doi: 10.1007/s00103-013-1819-x. German.

PMID:
24170077
[PubMed - indexed for MEDLINE]
9.

Sensitive detection of viral transcripts in human tumor transcriptomes.

Schelhorn SE, Fischer M, Tolosi L, Altmüller J, Nürnberg P, Pfister H, Lengauer T, Berthold F.

PLoS Comput Biol. 2013;9(10):e1003228. doi: 10.1371/journal.pcbi.1003228. Epub 2013 Oct 3.

PMID:
24098097
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

DNA methylation patterns facilitate the identification of microRNA transcription start sites: a brain-specific study.

Bhadra T, Bhattacharyya M, Feuerbach L, Lengauer T, Bandyopadhyay S.

PLoS One. 2013 Jun 24;8(6):e66722. doi: 10.1371/journal.pone.0066722. Print 2013.

PMID:
23826117
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

A method for finding consensus breakpoints in the cancer genome from copy number data.

Toloşi L, Theißen J, Halachev K, Hero B, Berthold F, Lengauer T.

Bioinformatics. 2013 Jul 15;29(14):1793-800. doi: 10.1093/bioinformatics/btt300. Epub 2013 May 28.

PMID:
23716195
[PubMed - indexed for MEDLINE]
12.

Analysis of physicochemical and structural properties determining HIV-1 coreceptor usage.

Bozek K, Lengauer T, Sierra S, Kaiser R, Domingues FS.

PLoS Comput Biol. 2013;9(3):e1002977. doi: 10.1371/journal.pcbi.1002977. Epub 2013 Mar 21.

PMID:
23555214
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

Deep sequencing reveals mutagenic effects of ribavirin during monotherapy of hepatitis C virus genotype 1-infected patients.

Dietz J, Schelhorn SE, Fitting D, Mihm U, Susser S, Welker MW, Füller C, Däumer M, Teuber G, Wedemeyer H, Berg T, Lengauer T, Zeuzem S, Herrmann E, Sarrazin C.

J Virol. 2013 Jun;87(11):6172-81. doi: 10.1128/JVI.02778-12. Epub 2013 Mar 27.

PMID:
23536652
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

Comparative genome-wide DNA methylation analysis of colorectal tumor and matched normal tissues.

Simmer F, Brinkman AB, Assenov Y, Matarese F, Kaan A, Sabatino L, Villanueva A, Huertas D, Esteller M, Lengauer T, Bock C, Colantuoni V, Altucci L, Stunnenberg HG.

Epigenetics. 2012 Dec 1;7(12):1355-67. doi: 10.4161/epi.22562. Epub 2012 Oct 18.

PMID:
23079744
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

EpiExplorer: live exploration and global analysis of large epigenomic datasets.

Halachev K, Bast H, Albrecht F, Lengauer T, Bock C.

Genome Biol. 2012 Oct 3;13(10):R96. [Epub ahead of print]

PMID:
23034089
[PubMed - as supplied by publisher]
Free PMC Article
16.

Improving HIV coreceptor usage prediction in the clinic using hints from next-generation sequencing data.

Pfeifer N, Lengauer T.

Bioinformatics. 2012 Sep 15;28(18):i589-i595. doi: 10.1093/bioinformatics/bts373.

PMID:
22962486
[PubMed - indexed for MEDLINE]
Free PMC Article
17.

An expanded model of HIV cell entry phenotype based on multi-parameter single-cell data.

Bozek K, Eckhardt M, Sierra S, Anders M, Kaiser R, Kräusslich HG, Müller B, Lengauer T.

Retrovirology. 2012 Jul 25;9:60. doi: 10.1186/1742-4690-9-60.

PMID:
22830600
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

Paving the future: finding suitable ISMB venues.

Rost B, Gaasterland T, Lengauer T, Linial M, Markel S, Morrison McKay BJ, Schneider R, Horton P, Kelso J.

Bioinformatics. 2012 Oct 1;28(19):2556-9. Epub 2012 Jul 13.

PMID:
22796959
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

Genotyping hepatitis B virus dual infections using population-based sequence data.

Beggel B, Neumann-Fraune M, Döring M, Lawyer G, Kaiser R, Verheyen J, Lengauer T.

J Gen Virol. 2012 Sep;93(Pt 9):1899-907. doi: 10.1099/vir.0.043042-0. Epub 2012 Jun 13.

PMID:
22694900
[PubMed - indexed for MEDLINE]
Free Article
20.

Managing drug resistance in cancer: lessons from HIV therapy.

Bock C, Lengauer T.

Nat Rev Cancer. 2012 Jun 7;12(7):494-501. doi: 10.1038/nrc3297.

PMID:
22673150
[PubMed - indexed for MEDLINE]

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