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Results: 1 to 20 of 23

1.

bPeaks: a bioinformatics tool to detect transcription factor binding sites from ChIPseq data in yeasts and other organisms with small genomes.

Merhej J, Frigo A, Le Crom S, Camadro JM, Devaux F, Lelandais G.

Yeast. 2014 Jul 9. doi: 10.1002/yea.3031. [Epub ahead of print]

PMID:
25041923
[PubMed - as supplied by publisher]
2.

Global stress response in a prokaryotic model of DJ-1-associated Parkinsonism.

Messaoudi N, Gautier V, Kthiri F, Lelandais G, Mihoub M, Joseleau-Petit D, Caldas T, Bohn C, Tolosa L, Rao G, Tao K, Landoulsi A, Bouloc P, Richarme G.

J Bacteriol. 2013 Mar;195(6):1167-78. doi: 10.1128/JB.02202-12. Epub 2013 Jan 4.

PMID:
23292772
[PubMed - indexed for MEDLINE]
Free PMC Article
3.

RNA sequencing revealed novel actors of the acquisition of drug resistance in Candida albicans.

Dhamgaye S, Bernard M, Lelandais G, Sismeiro O, Lemoine S, Coppée JY, Le Crom S, Prasad R, Devaux F.

BMC Genomics. 2012 Aug 16;13:396.

PMID:
22897889
[PubMed - indexed for MEDLINE]
Free PMC Article
4.

Transcriptomic analyses during the transition from biomass production to lipid accumulation in the oleaginous yeast Yarrowia lipolytica.

Morin N, Cescut J, Beopoulos A, Lelandais G, Le Berre V, Uribelarrea JL, Molina-Jouve C, Nicaud JM.

PLoS One. 2011;6(11):e27966. doi: 10.1371/journal.pone.0027966. Epub 2011 Nov 22.

PMID:
22132183
[PubMed - indexed for MEDLINE]
Free PMC Article
5.

The evolution of gene expression regulatory networks in yeasts.

Lelandais G, Goudot C, Devaux F.

C R Biol. 2011 Aug-Sep;334(8-9):655-61. doi: 10.1016/j.crvi.2011.05.014. Epub 2011 Jul 2. Review.

PMID:
21819947
[PubMed - indexed for MEDLINE]
6.

The reconstruction of condition-specific transcriptional modules provides new insights in the evolution of yeast AP-1 proteins.

Goudot C, Etchebest C, Devaux F, Lelandais G.

PLoS One. 2011;6(6):e20924. doi: 10.1371/journal.pone.0020924. Epub 2011 Jun 9.

PMID:
21695268
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

Comparative transcriptomics of drought responses in Populus: a meta-analysis of genome-wide expression profiling in mature leaves and root apices across two genotypes.

Cohen D, Bogeat-Triboulot MB, Tisserant E, Balzergue S, Martin-Magniette ML, Lelandais G, Ningre N, Renou JP, Tamby JP, Le Thiec D, Hummel I.

BMC Genomics. 2010 Nov 12;11:630. doi: 10.1186/1471-2164-11-630.

PMID:
21073700
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

Posttranscriptional control of mitochondrial biogenesis: spatio-temporal regulation of the protein import process.

Devaux F, Lelandais G, Garcia M, Goussard S, Jacq C.

FEBS Lett. 2010 Oct 22;584(20):4273-9. doi: 10.1016/j.febslet.2010.09.030. Epub 2010 Sep 26. Review.

PMID:
20875412
[PubMed - indexed for MEDLINE]
Free Article
9.

Statistical inference of the time-varying structure of gene-regulation networks.

Lèbre S, Becq J, Devaux F, Stumpf MP, Lelandais G.

BMC Syst Biol. 2010 Sep 22;4:130. doi: 10.1186/1752-0509-4-130.

PMID:
20860793
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

MitoGenesisDB: an expression data mining tool to explore spatio-temporal dynamics of mitochondrial biogenesis.

Gelly JC, Orgeur M, Jacq C, Lelandais G.

Nucleic Acids Res. 2011 Jan;39(Database issue):D1079-84. doi: 10.1093/nar/gkq781. Epub 2010 Sep 9.

PMID:
20833631
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

Comparative functional genomics of stress responses in yeasts.

Lelandais G, Devaux F.

OMICS. 2010 Oct;14(5):501-15. doi: 10.1089/omi.2010.0029. Epub 2010 Aug 9. Review.

PMID:
20695825
[PubMed - indexed for MEDLINE]
12.

Comparative analysis of missing value imputation methods to improve clustering and interpretation of microarray experiments.

Celton M, Malpertuy A, Lelandais G, de Brevern AG.

BMC Genomics. 2010 Jan 7;11:15. doi: 10.1186/1471-2164-11-15.

PMID:
20056002
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

Spatio-temporal dynamics of yeast mitochondrial biogenesis: transcriptional and post-transcriptional mRNA oscillatory modules.

Lelandais G, Saint-Georges Y, Geneix C, Al-Shikhley L, Dujardin G, Jacq C.

PLoS Comput Biol. 2009 Jun;5(6):e1000409. doi: 10.1371/journal.pcbi.1000409. Epub 2009 Jun 12.

PMID:
19521515
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

Genome adaptation to chemical stress: clues from comparative transcriptomics in Saccharomyces cerevisiae and Candida glabrata.

Lelandais G, Tanty V, Geneix C, Etchebest C, Jacq C, Devaux F.

Genome Biol. 2008;9(11):R164. doi: 10.1186/gb-2008-9-11-r164. Epub 2008 Nov 24.

PMID:
19025642
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

Structure and properties of transcriptional networks driving selenite stress response in yeasts.

Salin H, Fardeau V, Piccini E, Lelandais G, Tanty V, Lemoine S, Jacq C, Devaux F.

BMC Genomics. 2008 Jul 15;9:333. doi: 10.1186/1471-2164-9-333.

PMID:
18627600
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

Clustering gene expression data using graph separators.

Kaba B, Pinet N, Lelandais G, Sigayret A, Berry A.

In Silico Biol. 2007;7(4-5):433-52.

PMID:
18391236
[PubMed - indexed for MEDLINE]
17.

Responses of pathogenic and nonpathogenic yeast species to steroids reveal the functioning and evolution of multidrug resistance transcriptional networks.

Banerjee D, Lelandais G, Shukla S, Mukhopadhyay G, Jacq C, Devaux F, Prasad R.

Eukaryot Cell. 2008 Jan;7(1):68-77. Epub 2007 Nov 9.

PMID:
17993571
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

The central role of PDR1 in the foundation of yeast drug resistance.

Fardeau V, Lelandais G, Oldfield A, Salin H, Lemoine S, Garcia M, Tanty V, Le Crom S, Jacq C, Devaux F.

J Biol Chem. 2007 Feb 16;282(7):5063-74. Epub 2006 Dec 11.

PMID:
17158869
[PubMed - indexed for MEDLINE]
Free Article
19.

Comparing gene expression networks in a multi-dimensional space to extract similarities and differences between organisms.

Lelandais G, Vincens P, Badel-Chagnon A, Vialette S, Jacq C, Hazout S.

Bioinformatics. 2006 Jun 1;22(11):1359-66. Epub 2006 Mar 9.

PMID:
16527831
[PubMed - indexed for MEDLINE]
Free Article
20.

Early expression of yeast genes affected by chemical stress.

Lucau-Danila A, Lelandais G, Kozovska Z, Tanty V, Delaveau T, Devaux F, Jacq C.

Mol Cell Biol. 2005 Mar;25(5):1860-8.

PMID:
15713640
[PubMed - indexed for MEDLINE]
Free PMC Article

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