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Items: 6

1.

A whole-genome sequence and transcriptome perspective on HER2-positive breast cancers.

Ferrari A, Vincent-Salomon A, Pivot X, Sertier AS, Thomas E, Tonon L, Boyault S, Mulugeta E, Treilleux I, MacGrogan G, Arnould L, Kielbassa J, Le Texier V, Blanché H, Deleuze JF, Jacquemier J, Mathieu MC, Penault-Llorca F, Bibeau F, Mariani O, Mannina C, Pierga JY, Trédan O, Bachelot T, Bonnefoi H, Romieu G, Fumoleau P, Delaloge S, Rios M, Ferrero JM, Tarpin C, Bouteille C, Calvo F, Gut IG, Gut M, Martin S, Nik-Zainal S, Stratton MR, Pauporté I, Saintigny P, Birnbaum D, Viari A, Thomas G.

Nat Commun. 2016 Jul 13;7:12222. doi: 10.1038/ncomms12222.

PMID:
27406316
2.

The dynamics of gene expression changes in a mouse model of oral tumorigenesis may help refine prevention and treatment strategies in patients with oral cancer.

Foy JP, Tortereau A, Caulin C, Le Texier V, Lavergne E, Thomas E, Chabaud S, Perol D, Lachuer J, Lang W, Hong WK, Goudot P, Lippman SM, Bertolus C, Saintigny P.

Oncotarget. 2016 Mar 24. doi: 10.18632/oncotarget.8321. [Epub ahead of print]

3.

ASTD: The Alternative Splicing and Transcript Diversity database.

Koscielny G, Le Texier V, Gopalakrishnan C, Kumanduri V, Riethoven JJ, Nardone F, Stanley E, Fallsehr C, Hofmann O, Kull M, Harrington E, Boué S, Eyras E, Plass M, Lopez F, Ritchie W, Moucadel V, Ara T, Pospisil H, Herrmann A, G Reich J, Guigó R, Bork P, Doeberitz Mv, Vilo J, Hide W, Apweiler R, Thanaraj TA, Gautheret D.

Genomics. 2009 Mar;93(3):213-20. doi: 10.1016/j.ygeno.2008.11.003. Epub 2008 Dec 24.

4.

AltTrans: transcript pattern variants annotated for both alternative splicing and alternative polyadenylation.

Le Texier V, Riethoven JJ, Kumanduri V, Gopalakrishnan C, Lopez F, Gautheret D, Thanaraj TA.

BMC Bioinformatics. 2006 Mar 23;7:169.

5.

ASD: a bioinformatics resource on alternative splicing.

Stamm S, Riethoven JJ, Le Texier V, Gopalakrishnan C, Kumanduri V, Tang Y, Barbosa-Morais NL, Thanaraj TA.

Nucleic Acids Res. 2006 Jan 1;34(Database issue):D46-55.

6.

ASD: the Alternative Splicing Database.

Thanaraj TA, Stamm S, Clark F, Riethoven JJ, Le Texier V, Muilu J.

Nucleic Acids Res. 2004 Jan 1;32(Database issue):D64-9.

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