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Results: 12

1.

Large-scale gene expression profiling data for the model moss Physcomitrella patens aid understanding of developmental progression, culture and stress conditions.

Hiss M, Laule O, Meskauskiene RM, Arif MA, Decker EL, Erxleben A, Frank W, Hanke ST, Lang D, Martin A, Neu C, Reski R, Richardt S, Schallenberg-Rüdinger M, Szövényi P, Tiko T, Wiedemann G, Wolf L, Zimmermann P, Rensing SA.

Plant J. 2014 Jun 2. doi: 10.1111/tpj.12572. [Epub ahead of print]

PMID:
24889180
[PubMed - as supplied by publisher]
2.

Global regulatory architecture of human, mouse and rat tissue transcriptomes.

Prasad A, Kumar SS, Dessimoz C, Bleuler S, Laule O, Hruz T, Gruissem W, Zimmermann P.

BMC Genomics. 2013 Oct 20;14:716. doi: 10.1186/1471-2164-14-716.

PMID:
24138449
[PubMed - in process]
Free PMC Article
3.

Controlled vocabularies for plant anatomical parts optimized for use in data analysis tools and for cross-species studies.

Meskauskiene R, Laule O, Ivanov NV, Martin F, Wyss M, Gruissem W, Zimmermann P.

Plant Methods. 2013 Aug 6;9(1):33. doi: 10.1186/1746-4811-9-33.

PMID:
23958387
[PubMed]
Free PMC Article
4.

A multilevel gamma-clustering layout algorithm for visualization of biological networks.

Hruz T, Wyss M, Lucas C, Laule O, von Rohr P, Zimmermann P, Bleuler S.

Adv Bioinformatics. 2013;2013:920325. doi: 10.1155/2013/920325. Epub 2013 Jun 26.

PMID:
23864855
[PubMed]
Free PMC Article
5.

Integrative genome-wide expression profiling identifies three distinct molecular subgroups of renal cell carcinoma with different patient outcome.

Beleut M, Zimmermann P, Baudis M, Bruni N, Bühlmann P, Laule O, Luu VD, Gruissem W, Schraml P, Moch H.

BMC Cancer. 2012 Jul 23;12:310. doi: 10.1186/1471-2407-12-310.

PMID:
22824167
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

RefGenes: identification of reliable and condition specific reference genes for RT-qPCR data normalization.

Hruz T, Wyss M, Docquier M, Pfaffl MW, Masanetz S, Borghi L, Verbrugghe P, Kalaydjieva L, Bleuler S, Laule O, Descombes P, Gruissem W, Zimmermann P.

BMC Genomics. 2011 Mar 21;12:156. doi: 10.1186/1471-2164-12-156.

PMID:
21418615
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

Genevestigator transcriptome meta-analysis and biomarker search using rice and barley gene expression databases.

Zimmermann P, Laule O, Schmitz J, Hruz T, Bleuler S, Gruissem W.

Mol Plant. 2008 Sep;1(5):851-7. doi: 10.1093/mp/ssn048. Erratum in: Mol Plant. 2008 Nov;1(6):1088.

PMID:
19825587
[PubMed - indexed for MEDLINE]
8.

Genevestigator v3: a reference expression database for the meta-analysis of transcriptomes.

Hruz T, Laule O, Szabo G, Wessendorp F, Bleuler S, Oertle L, Widmayer P, Gruissem W, Zimmermann P.

Adv Bioinformatics. 2008;2008:420747. doi: 10.1155/2008/420747. Epub 2008 Jul 8.

PMID:
19956698
[PubMed]
Free PMC Article
9.

Web-based analysis of the mouse transcriptome using Genevestigator.

Laule O, Hirsch-Hoffmann M, Hruz T, Gruissem W, Zimmermann P.

BMC Bioinformatics. 2006 Jun 21;7:311.

PMID:
16790046
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

Sparse graphical Gaussian modeling of the isoprenoid gene network in Arabidopsis thaliana.

Wille A, Zimmermann P, Vranová E, Fürholz A, Laule O, Bleuler S, Hennig L, Prelic A, von Rohr P, Thiele L, Zitzler E, Gruissem W, Bühlmann P.

Genome Biol. 2004;5(11):R92. Epub 2004 Oct 25.

PMID:
15535868
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

Crosstalk between cytosolic and plastidial pathways of isoprenoid biosynthesis in Arabidopsis thaliana.

Laule O, Fürholz A, Chang HS, Zhu T, Wang X, Heifetz PB, Gruissem W, Lange M.

Proc Natl Acad Sci U S A. 2003 May 27;100(11):6866-71. Epub 2003 May 14.

PMID:
12748386
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

Identification of a novel gene coding for neoxanthin synthase from Solanum tuberosum.

Al-Babili S, Hugueney P, Schledz M, Welsch R, Frohnmeyer H, Laule O, Beyer P.

FEBS Lett. 2000 Nov 24;485(2-3):168-72.

PMID:
11094161
[PubMed - indexed for MEDLINE]
Free Article

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