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Items: 1 to 20 of 37

1.

Lower Bounds on Paraclique Density.

Hagan RD, Langston MA, Wang K.

Discrete Appl Math. 2016 May 11;204:208-212.

PMID:
27057077
2.

Cross-Species Integrative Functional Genomics in GeneWeaver Reveals a Role for Pafah1b1 in Altered Response to Alcohol.

Bubier JA, Wilcox TD, Jay JJ, Langston MA, Baker EJ, Chesler EJ.

Front Behav Neurosci. 2016 Jan 21;10:1. doi: 10.3389/fnbeh.2016.00001. eCollection 2016.

3.

Validation of research trajectory 1 of an Exposome framework: Exposure to benzo(a)pyrene confers enhanced susceptibility to bacterial infection.

Clark RS, Pellom ST, Booker B, Ramesh A, Zhang T, Shanker A, Maguire M, Juarez PD, Patricia MJ, Langston MA, Lichtveld MY, Hood DB.

Environ Res. 2016 Apr;146:173-84. doi: 10.1016/j.envres.2015.12.027. Epub 2016 Jan 5.

PMID:
26765097
4.

EntropyExplorer: an R package for computing and comparing differential Shannon entropy, differential coefficient of variation and differential expression.

Wang K, Phillips CA, Saxton AM, Langston MA.

BMC Res Notes. 2015 Dec 30;8:832. doi: 10.1186/s13104-015-1786-4.

5.

GeneWeaver: data driven alignment of cross-species genomics in biology and disease.

Baker E, Bubier JA, Reynolds T, Langston MA, Chesler EJ.

Nucleic Acids Res. 2016 Jan 4;44(D1):D555-9. doi: 10.1093/nar/gkv1329. Epub 2015 Dec 9.

6.

GeneWeaver: finding consilience in heterogeneous cross-species functional genomics data.

Bubier JA, Phillips CA, Langston MA, Baker EJ, Chesler EJ.

Mamm Genome. 2015 Oct;26(9-10):556-66. doi: 10.1007/s00335-015-9575-x. Epub 2015 Jun 20.

7.

The public health exposome: a population-based, exposure science approach to health disparities research.

Juarez PD, Matthews-Juarez P, Hood DB, Im W, Levine RS, Kilbourne BJ, Langston MA, Al-Hamdan MZ, Crosson WL, Estes MG, Estes SM, Agboto VK, Robinson P, Wilson S, Lichtveld MY.

Int J Environ Res Public Health. 2014 Dec;11(12):12866-95.

PMID:
25590101
8.

The public health exposome: a population-based, exposure science approach to health disparities research.

Juarez PD, Matthews-Juarez P, Hood DB, Im W, Levine RS, Kilbourne BJ, Langston MA, Al-Hamdan MZ, Crosson WL, Estes MG, Estes SM, Agboto VK, Robinson P, Wilson S, Lichtveld MY.

Int J Environ Res Public Health. 2014 Dec 11;11(12):12866-95. doi: 10.3390/ijerph111212866.

9.

Efficient prediction of human protein-protein interactions at a global scale.

Schoenrock A, Samanfar B, Pitre S, Hooshyar M, Jin K, Phillips CA, Wang H, Phanse S, Omidi K, Gui Y, Alamgir M, Wong A, Barrenäs F, Babu M, Benson M, Langston MA, Green JR, Dehne F, Golshani A.

BMC Bioinformatics. 2014 Dec 10;15:383. doi: 10.1186/s12859-014-0383-1.

10.

Exploration of preterm birth rates using the public health exposome database and computational analysis methods.

Kershenbaum AD, Langston MA, Levine RS, Saxton AM, Oyana TJ, Kilbourne BJ, Rogers GL, Gittner LS, Baktash SH, Matthews-Juarez P, Juarez PD.

Int J Environ Res Public Health. 2014 Nov 28;11(12):12346-66. doi: 10.3390/ijerph111212346.

11.

Social determinants and the classification of disease: descriptive epidemiology of selected socially mediated disease constellations.

Levine RS, Kilbourne BA, Rust GS, Langston MA, Husaini BA, Gittner LS, Sanderson M, Hennekens CH.

PLoS One. 2014 Nov 5;9(11):e110271. doi: 10.1371/journal.pone.0110271. eCollection 2014.

12.

Scalable combinatorial tools for health disparities research.

Langston MA, Levine RS, Kilbourne BJ, Rogers GL, Kershenbaum AD, Baktash SH, Coughlin SS, Saxton AM, Agboto VK, Hood DB, Litchveld MY, Oyana TJ, Matthews-Juarez P, Juarez PD.

Int J Environ Res Public Health. 2014 Oct 10;11(10):10419-43. doi: 10.3390/ijerph111010419.

13.

Differential Shannon entropy and differential coefficient of variation: alternatives and augmentations to differential expression in the search for disease-related genes.

Wang K, Phillips CA, Rogers GL, Barrenas F, Benson M, Langston MA.

Int J Comput Biol Drug Des. 2014;7(2-3):183-94. doi: 10.1504/IJCBDD.2014.061656. Epub 2014 May 28.

14.

On finding bicliques in bipartite graphs: a novel algorithm and its application to the integration of diverse biological data types.

Zhang Y, Phillips CA, Rogers GL, Baker EJ, Chesler EJ, Langston MA.

BMC Bioinformatics. 2014 Apr 15;15:110. doi: 10.1186/1471-2105-15-110.

15.

DNA methylation changes separate allergic patients from healthy controls and may reflect altered CD4+ T-cell population structure.

Nestor CE, Barrenäs F, Wang H, Lentini A, Zhang H, Bruhn S, Jörnsten R, Langston MA, Rogers G, Gustafsson M, Benson M.

PLoS Genet. 2014 Jan;10(1):e1004059. doi: 10.1371/journal.pgen.1004059. Epub 2014 Jan 2.

16.

A systematic comparison of genome-scale clustering algorithms.

Jay JJ, Eblen JD, Zhang Y, Benson M, Perkins AD, Saxton AM, Voy BH, Chesler EJ, Langston MA.

BMC Bioinformatics. 2012 Jun 25;13 Suppl 10:S7. doi: 10.1186/1471-2105-13-S10-S7.

17.

The maximum clique enumeration problem: algorithms, applications, and implementations.

Eblen JD, Phillips CA, Rogers GL, Langston MA.

BMC Bioinformatics. 2012 Jun 25;13 Suppl 10:S5. doi: 10.1186/1471-2105-13-S10-S5.

18.

Highly interconnected genes in disease-specific networks are enriched for disease-associated polymorphisms.

Barrenäs F, Chavali S, Alves AC, Coin L, Jarvelin MR, Jörnsten R, Langston MA, Ramasamy A, Rogers G, Wang H, Benson M.

Genome Biol. 2012 Jun 15;13(6):R46. doi: 10.1186/gb-2012-13-6-r46.

19.

Genetic dissection of acute ethanol responsive gene networks in prefrontal cortex: functional and mechanistic implications.

Wolen AR, Phillips CA, Langston MA, Putman AH, Vorster PJ, Bruce NA, York TP, Williams RW, Miles MF.

PLoS One. 2012;7(4):e33575. doi: 10.1371/journal.pone.0033575. Epub 2012 Apr 12.

20.

GeneWeaver: a web-based system for integrative functional genomics.

Baker EJ, Jay JJ, Bubier JA, Langston MA, Chesler EJ.

Nucleic Acids Res. 2012 Jan;40(Database issue):D1067-76. doi: 10.1093/nar/gkr968. Epub 2011 Nov 12.

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