Display Settings:

Format
Items per page
Sort by

Send to:

Choose Destination

Results: 1 to 20 of 105

1.

Genome-wide DNA methylation patterns in LSH mutant reveals de-repression of repeat elements and redundant epigenetic silencing pathways.

Yu W, McIntosh C, Lister R, Zhu I, Han Y, Ren J, Landsman D, Lee E, Briones V, Terashima M, Leighty R, Ecker JR, Muegge K.

Genome Res. 2014 Aug 28. pii: gr.172015.114. [Epub ahead of print]

PMID:
25170028
[PubMed - as supplied by publisher]
2.

Identification of immunity related genes to study the Physalis peruviana--Fusarium oxysporum pathosystem.

Enciso-Rodríguez FE, González C, Rodríguez EA, López CE, Landsman D, Barrero LS, Mariño-Ramírez L.

PLoS One. 2013 Jul 3;8(7):e68500. doi: 10.1371/journal.pone.0068500. Print 2013.

PMID:
23844210
[PubMed - indexed for MEDLINE]
Free PMC Article
3.

HMGN1 modulates nucleosome occupancy and DNase I hypersensitivity at the CpG island promoters of embryonic stem cells.

Deng T, Zhu ZI, Zhang S, Leng F, Cherukuri S, Hansen L, Mariño-Ramírez L, Meshorer E, Landsman D, Bustin M.

Mol Cell Biol. 2013 Aug;33(16):3377-89. doi: 10.1128/MCB.00435-13. Epub 2013 Jun 17.

PMID:
23775126
[PubMed - indexed for MEDLINE]
Free PMC Article
4.

Obituary: In memory of Jack Leunissen.

Luo J, Nijveen H, Attwood T, Judge D, Pongor S, Landsman D, Bishop M.

Brief Bioinform. 2013 May;14(3):261-2. doi: 10.1093/bib/bbt036. No abstract available.

PMID:
23696635
[PubMed - indexed for MEDLINE]
5.

In silico identification and characterization of the ion transport specificity for P-type ATPases in the Mycobacterium tuberculosis complex.

Novoa-Aponte L, León-Torres A, Patiño-Ruiz M, Cuesta-Bernal J, Salazar LM, Landsman D, Mariño-Ramírez L, Soto CY.

BMC Struct Biol. 2012 Oct 3;12:25. doi: 10.1186/1472-6807-12-25.

PMID:
23031689
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

Differences in local genomic context of bound and unbound motifs.

Hansen L, Mariño-Ramírez L, Landsman D.

Gene. 2012 Sep 10;506(1):125-34. doi: 10.1016/j.gene.2012.06.005. Epub 2012 Jun 10.

PMID:
22692006
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

A unified phylogeny-based nomenclature for histone variants.

Talbert PB, Ahmad K, Almouzni G, Ausió J, Berger F, Bhalla PL, Bonner WM, Cande WZ, Chadwick BP, Chan SW, Cross GA, Cui L, Dimitrov SI, Doenecke D, Eirin-López JM, Gorovsky MA, Hake SB, Hamkalo BA, Holec S, Jacobsen SE, Kamieniarz K, Khochbin S, Ladurner AG, Landsman D, Latham JA, Loppin B, Malik HS, Marzluff WF, Pehrson JR, Postberg J, Schneider R, Singh MB, Smith MM, Thompson E, Torres-Padilla ME, Tremethick DJ, Turner BM, Waterborg JH, Wollmann H, Yelagandula R, Zhu B, Henikoff S.

Epigenetics Chromatin. 2012 Jun 21;5:7. doi: 10.1186/1756-8935-5-7.

PMID:
22650316
[PubMed]
Free PMC Article
8.

The Physalis peruviana leaf transcriptome: assembly, annotation and gene model prediction.

Garzón-Martínez GA, Zhu ZI, Landsman D, Barrero LS, Mariño-Ramírez L.

BMC Genomics. 2012 Apr 25;13:151. doi: 10.1186/1471-2164-13-151.

PMID:
22533342
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

Analysis of biological features associated with meiotic recombination hot and cold spots in Saccharomyces cerevisiae.

Hansen L, Kim NK, Mariño-Ramírez L, Landsman D.

PLoS One. 2011;6(12):e29711. doi: 10.1371/journal.pone.0029711. Epub 2011 Dec 29.

PMID:
22242140
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

Database resources of the National Center for Biotechnology Information.

Sayers EW, Barrett T, Benson DA, Bolton E, Bryant SH, Canese K, Chetvernin V, Church DM, Dicuccio M, Federhen S, Feolo M, Fingerman IM, Geer LY, Helmberg W, Kapustin Y, Krasnov S, Landsman D, Lipman DJ, Lu Z, Madden TL, Madej T, Maglott DR, Marchler-Bauer A, Miller V, Karsch-Mizrachi I, Ostell J, Panchenko A, Phan L, Pruitt KD, Schuler GD, Sequeira E, Sherry ST, Shumway M, Sirotkin K, Slotta D, Souvorov A, Starchenko G, Tatusova TA, Wagner L, Wang Y, Wilbur WJ, Yaschenko E, Ye J.

Nucleic Acids Res. 2012 Jan;40(Database issue):D13-25. doi: 10.1093/nar/gkr1184. Epub 2011 Dec 2.

PMID:
22140104
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

Ten simple rules for developing a short bioinformatics training course.

Via A, De Las Rivas J, Attwood TK, Landsman D, Brazas MD, Leunissen JA, Tramontano A, Schneider MV.

PLoS Comput Biol. 2011 Oct;7(10):e1002245. doi: 10.1371/journal.pcbi.1002245. Epub 2011 Oct 27. No abstract available.

PMID:
22046119
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

The Histone Database: an integrated resource for histones and histone fold-containing proteins.

Mariño-Ramírez L, Levine KM, Morales M, Zhang S, Moreland RT, Baxevanis AD, Landsman D.

Database (Oxford). 2011 Oct 23;2011:bar048. doi: 10.1093/database/bar048. Print 2011.

PMID:
22025671
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

Genome sequence of the Mycobacterium colombiense type strain, CECT 3035.

González-Pérez M, Murcia MI, Landsman D, Jordan IK, Mariño-Ramírez L.

J Bacteriol. 2011 Oct;193(20):5866-7. doi: 10.1128/JB.05928-11.

PMID:
21952541
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

Effects of HMGN variants on the cellular transcription profile.

Rochman M, Taher L, Kurahashi T, Cherukuri S, Uversky VN, Landsman D, Ovcharenko I, Bustin M.

Nucleic Acids Res. 2011 May;39(10):4076-87. doi: 10.1093/nar/gkq1343. Epub 2011 Jan 28.

PMID:
21278158
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

Towards BioDBcore: a community-defined information specification for biological databases.

Gaudet P, Bairoch A, Field D, Sansone SA, Taylor C, Attwood TK, Bateman A, Blake JA, Bult CJ, Cherry JM, Chisholm RL, Cochrane G, Cook CE, Eppig JT, Galperin MY, Gentleman R, Goble CA, Gojobori T, Hancock JM, Howe DG, Imanishi T, Kelso J, Landsman D, Lewis SE, Karsch Mizrachi I, Orchard S, Ouellette BF, Ranganathan S, Richardson L, Rocca-Serra P, Schofield PN, Smedley D, Southan C, Tan TW, Tatusova T, Whetzel PL, White O, Yamasaki C; BioDBCore Working Group.

Database (Oxford). 2011 Jan 4;2011:baq027. doi: 10.1093/database/baq027. Print 2011.

PMID:
21205783
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

Database resources of the National Center for Biotechnology Information.

Sayers EW, Barrett T, Benson DA, Bolton E, Bryant SH, Canese K, Chetvernin V, Church DM, DiCuccio M, Federhen S, Feolo M, Fingerman IM, Geer LY, Helmberg W, Kapustin Y, Landsman D, Lipman DJ, Lu Z, Madden TL, Madej T, Maglott DR, Marchler-Bauer A, Miller V, Mizrachi I, Ostell J, Panchenko A, Phan L, Pruitt KD, Schuler GD, Sequeira E, Sherry ST, Shumway M, Sirotkin K, Slotta D, Souvorov A, Starchenko G, Tatusova TA, Wagner L, Wang Y, Wilbur WJ, Yaschenko E, Ye J.

Nucleic Acids Res. 2011 Jan;39(Database issue):D38-51. doi: 10.1093/nar/gkq1172. Epub 2010 Nov 21.

PMID:
21097890
[PubMed - indexed for MEDLINE]
Free PMC Article
17.

Towards BioDBcore: a community-defined information specification for biological databases.

Gaudet P, Bairoch A, Field D, Sansone SA, Taylor C, Attwood TK, Bateman A, Blake JA, Bult CJ, Cherry JM, Chisholm RL, Cochrane G, Cook CE, Eppig JT, Galperin MY, Gentleman R, Goble CA, Gojobori T, Hancock JM, Howe DG, Imanishi T, Kelso J, Landsman D, Lewis SE, Mizrachi IK, Orchard S, Ouellette BF, Ranganathan S, Richardson L, Rocca-Serra P, Schofield PN, Smedley D, Southan C, Tan TW, Tatusova T, Whetzel PL, White O, Yamasaki C; BioDBCore Working Group.

Nucleic Acids Res. 2011 Jan;39(Database issue):D7-10. doi: 10.1093/nar/gkq1173. Epub 2010 Nov 18.

PMID:
21097465
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

Brief suppression of Abcc8 prevents autodestruction of spinal cord after trauma.

Simard JM, Woo SK, Norenberg MD, Tosun C, Chen Z, Ivanova S, Tsymbalyuk O, Bryan J, Landsman D, Gerzanich V.

Sci Transl Med. 2010 Apr 21;2(28):28ra29. doi: 10.1126/scitranslmed.3000522.

PMID:
20410530
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

DATABASE: A new forum for biological databases and curation.

Landsman D, Gentleman R, Kelso J, Francis Ouellette BF.

Database (Oxford). 2009;2009:bap002. Epub 2009 Mar 16. No abstract available.

PMID:
20157475
[PubMed]
Free PMC Article
20.

Many sequence-specific chromatin modifying protein-binding motifs show strong positional preferences for potential regulatory regions in the Saccharomyces cerevisiae genome.

Hansen L, Mariño-Ramírez L, Landsman D.

Nucleic Acids Res. 2010 Apr;38(6):1772-9. doi: 10.1093/nar/gkp1195. Epub 2010 Jan 4.

PMID:
20047965
[PubMed - indexed for MEDLINE]
Free PMC Article

Display Settings:

Format
Items per page
Sort by

Send to:

Choose Destination

Supplemental Content

Loading ...
Write to the Help Desk