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Items: 1 to 20 of 49

1.

Draft Genomes for Eight Burkholderia mallei Isolates from Turkey.

Daligault HE, Johnson SL, Davenport KW, Minogue TD, Bishop-Lilly KA, Broomall SM, Bruce DC, Coyne SR, Frey KG, Gibbons HS, Jaissle J, Koroleva GI, Ladner JT, Lo CC, Munk C, Wolcott MJ, Palacios GF, Redden CL, Rosenzweig CN, Scholz MB, Chain PS.

Genome Announc. 2016 Jan 7;4(1). pii: e01234-15. doi: 10.1128/genomeA.01234-15.

2.

Pathosphere.org: pathogen detection and characterization through a web-based, open source informatics platform.

Kilianski A, Carcel P, Yao S, Roth P, Schulte J, Donarum GB, Fochler ET, Hill JM, Liem AT, Wiley MR, Ladner JT, Pfeffer BP, Elliot O, Petrosov A, Jima DD, Vallard TG, Melendrez MC, Skowronski E, Quan PL, Lipkin WI, Gibbons HS, Hirschberg DL, Palacios GF, Rosenzweig CN.

BMC Bioinformatics. 2015 Dec 29;16(1):416. doi: 10.1186/s12859-015-0840-5.

3.

Ebola Virus Infections in Nonhuman Primates Are Temporally Influenced by Glycoprotein Poly-U Editing Site Populations in the Exposure Material.

Trefry JC, Wollen SE, Nasar F, Shamblin JD, Kern SJ, Bearss JJ, Jefferson MA, Chance TB, Kugelman JR, Ladner JT, Honko AN, Kobs DJ, Wending MQ, Sabourin CL, Pratt WD, Palacios GF, Pitt ML.

Viruses. 2015 Dec 19;7(12):6739-54. doi: 10.3390/v7122969.

4.

Evolution and Spread of Ebola Virus in Liberia, 2014-2015.

Ladner JT, Wiley MR, Mate S, Dudas G, Prieto K, Lovett S, Nagle ER, Beitzel B, Gilbert ML, Fakoli L, Diclaro JW 2nd, Schoepp RJ, Fair J, Kuhn JH, Hensley LE, Park DJ, Sabeti PC, Rambaut A, Sanchez-Lockhart M, Bolay FK, Kugelman JR, Palacios G.

Cell Host Microbe. 2015 Dec 9;18(6):659-69. doi: 10.1016/j.chom.2015.11.008.

PMID:
26651942
5.

Characterization of the murine macrophage response to infection with virulent and avirulent Burkholderia species.

Chiang CY, Ulrich RL, Ulrich MP, Eaton B, Ojeda JF, Lane DJ, Kota KP, Kenny TA, Ladner JT, Dickson SP, Kuehl K, Raychaudhuri R, Sun M, Bavari S, Wolcott MJ, Covell D, Panchal RG.

BMC Microbiol. 2015 Nov 6;15:259. doi: 10.1186/s12866-015-0593-3.

6.

Molecular Evidence of Sexual Transmission of Ebola Virus.

Mate SE, Kugelman JR, Nyenswah TG, Ladner JT, Wiley MR, Cordier-Lassalle T, Christie A, Schroth GP, Gross SM, Davies-Wayne GJ, Shinde SA, Murugan R, Sieh SB, Badio M, Fakoli L, Taweh F, de Wit E, van Doremalen N, Munster VJ, Pettitt J, Prieto K, Humrighouse BW, Ströher U, DiClaro JW, Hensley LE, Schoepp RJ, Safronetz D, Fair J, Kuhn JH, Blackley DJ, Laney AS, Williams DE, Lo T, Gasasira A, Nichol ST, Formenty P, Kateh FN, De Cock KM, Bolay F, Sanchez-Lockhart M, Palacios G.

N Engl J Med. 2015 Dec 17;373(25):2448-54. doi: 10.1056/NEJMoa1509773. Epub 2015 Oct 14.

7.

Development of real-time PCR assays for the detection of Moraxella macacae associated with bloody nose syndrome in rhesus (Macaca mulatta) and cynomolgus (Macaca fascicularis) macaques.

Whitehouse CA, Chase K, Embers ME, Kulesh DA, Ladner JT, Palacios GF, Minogue TD.

J Med Primatol. 2015 Dec;44(6):364-72. doi: 10.1111/jmp.12196. Epub 2015 Sep 14.

PMID:
26365904
8.

Emergence of Ebola Virus Escape Variants in Infected Nonhuman Primates Treated with the MB-003 Antibody Cocktail.

Kugelman JR, Kugelman-Tonos J, Ladner JT, Pettit J, Keeton CM, Nagle ER, Garcia KY, Froude JW, Kuehne AI, Kuhn JH, Bavari S, Zeitlin L, Dye JM, Olinger GG, Sanchez-Lockhart M, Palacios GF.

Cell Rep. 2015 Sep 29;12(12):2111-20. doi: 10.1016/j.celrep.2015.08.038. Epub 2015 Sep 10.

9.

Ebola Virus Epidemiology, Transmission, and Evolution during Seven Months in Sierra Leone.

Park DJ, Dudas G, Wohl S, Goba A, Whitmer SL, Andersen KG, Sealfon RS, Ladner JT, Kugelman JR, Matranga CB, Winnicki SM, Qu J, Gire SK, Gladden-Young A, Jalloh S, Nosamiefan D, Yozwiak NL, Moses LM, Jiang PP, Lin AE, Schaffner SF, Bird B, Towner J, Mamoh M, Gbakie M, Kanneh L, Kargbo D, Massally JL, Kamara FK, Konuwa E, Sellu J, Jalloh AA, Mustapha I, Foday M, Yillah M, Erickson BR, Sealy T, Blau D, Paddock C, Brault A, Amman B, Basile J, Bearden S, Belser J, Bergeron E, Campbell S, Chakrabarti A, Dodd K, Flint M, Gibbons A, Goodman C, Klena J, McMullan L, Morgan L, Russell B, Salzer J, Sanchez A, Wang D, Jungreis I, Tomkins-Tinch C, Kislyuk A, Lin MF, Chapman S, MacInnis B, Matthews A, Bochicchio J, Hensley LE, Kuhn JH, Nusbaum C, Schieffelin JS, Birren BW, Forget M, Nichol ST, Palacios GF, Ndiaye D, Happi C, Gevao SM, Vandi MA, Kargbo B, Holmes EC, Bedford T, Gnirke A, Ströher U, Rambaut A, Garry RF, Sabeti PC.

Cell. 2015 Jun 18;161(7):1516-26. doi: 10.1016/j.cell.2015.06.007.

10.

Monitoring of Ebola Virus Makona Evolution through Establishment of Advanced Genomic Capability in Liberia.

Kugelman JR, Wiley MR, Mate S, Ladner JT, Beitzel B, Fakoli L, Taweh F, Prieto K, Diclaro JW, Minogue T, Schoepp RJ, Schaecher KE, Pettitt J, Bateman S, Fair J, Kuhn JH, Hensley L, Park DJ, Sabeti PC, Sanchez-Lockhart M, Bolay FK, Palacios G; US Army Medical Research Institute of Infectious Diseases; National Institutes of Health; Integrated Research Facility–Frederick Ebola Response Team 2014–2015.

Emerg Infect Dis. 2015 Jul;21(7):1135-43. doi: 10.3201/eid2107.150522.

11.

Possible sexual transmission of Ebola virus - Liberia, 2015.

Christie A, Davies-Wayne GJ, Cordier-Lassalle T, Blackley DJ, Laney AS, Williams DE, Shinde SA, Badio M, Lo T, Mate SE, Ladner JT, Wiley MR, Kugelman JR, Palacios G, Holbrook MR, Janosko KB, de Wit E, van Doremalen N, Munster VJ, Pettitt J, Schoepp RJ, Verhenne L, Evlampidou I, Kollie KK, Sieh SB, Gasasira A, Bolay F, Kateh FN, Nyenswah TG, De Cock KM; Centers for Disease Control and Prevention (CDC).

MMWR Morb Mortal Wkly Rep. 2015 May 8;64(17):479-81. Erratum in: MMWR Morb Mortal Wkly Rep. 2015 Oct 23;64(41):1180. Cordier-Lasalle, Thierry [Corrected to Cordier-Lassalle, Thierry].

12.

Characterization of the Punta Toro species complex (genus Phlebovirus, family Bunyaviridae).

Palacios G, Wiley MR, Travassos da Rosa AP, Guzman H, Quiroz E, Savji N, Carrera JP, Bussetti AV, Ladner JT, Lipkin WI, Tesh RB.

J Gen Virol. 2015 Aug;96(8):2079-85. doi: 10.1099/vir.0.000170. Epub 2015 May 1.

PMID:
25934793
13.

Complete genome sequences for 59 burkholderia isolates, both pathogenic and near neighbor.

Johnson SL, Bishop-Lilly KA, Ladner JT, Daligault HE, Davenport KW, Jaissle J, Frey KG, Koroleva GI, Bruce DC, Coyne SR, Broomall SM, Li PE, Teshima H, Gibbons HS, Palacios GF, Rosenzweig CN, Redden CL, Xu Y, Minogue TD, Chain PS.

Genome Announc. 2015 Apr 30;3(2). pii: e00159-15. doi: 10.1128/genomeA.00159-15.

14.

Complete genome sequences for 35 biothreat assay-relevant bacillus species.

Johnson SL, Daligault HE, Davenport KW, Jaissle J, Frey KG, Ladner JT, Broomall SM, Bishop-Lilly KA, Bruce DC, Gibbons HS, Coyne SR, Lo CC, Meincke L, Munk AC, Koroleva GI, Rosenzweig CN, Palacios GF, Redden CL, Minogue TD, Chain PS.

Genome Announc. 2015 Apr 30;3(2). pii: e00151-15. doi: 10.1128/genomeA.00151-15.

15.

Thirty-Two Complete Genome Assemblies of Nine Yersinia Species, Including Y. pestis, Y. pseudotuberculosis, and Y. enterocolitica.

Johnson SL, Daligault HE, Davenport KW, Jaissle J, Frey KG, Ladner JT, Broomall SM, Bishop-Lilly KA, Bruce DC, Coyne SR, Gibbons HS, Lo CC, Munk AC, Rosenzweig CN, Koroleva GI, Palacios GF, Redden CL, Xu Y, Minogue TD, Chain PS.

Genome Announc. 2015 Apr 30;3(2). pii: e00148-15. doi: 10.1128/genomeA.00148-15.

16.

Genome sequencing of 18 francisella strains to aid in assay development and testing.

Johnson SL, Daligault HE, Davenport KW, Coyne SR, Frey KG, Koroleva GI, Broomall SM, Bishop-Lilly KA, Bruce DC, Chertkov O, Freitas T, Jaissle J, Ladner JT, Rosenzweig CN, Gibbons HS, Palacios GF, Redden CL, Xu Y, Minogue TD, Chain PS.

Genome Announc. 2015 Apr 30;3(2). pii: e00147-15. doi: 10.1128/genomeA.00147-15.

17.

Complete coding sequences of eastern equine encephalitis virus and venezuelan equine encephalitis virus strains isolated from human cases.

Yu GY, Wiley MR, Kugelman JR, Ladner JT, Beitzel BF, Eccleston LT, Morazzani EM, Glass PJ, Palacios GF.

Genome Announc. 2015 Apr 23;3(2). pii: e00243-15. doi: 10.1128/genomeA.00243-15.

18.

Whole-genome assemblies of 56 burkholderia species.

Daligault HE, Davenport KW, Minogue TD, Bishop-Lilly KA, Broomall SM, Bruce DC, Chain PS, Coyne SR, Frey KG, Gibbons HS, Jaissle J, Koroleva GI, Ladner JT, Lo CC, Munk C, Palacios GF, Redden CL, Rosenzweig CN, Scholz MB, Johnson SL.

Genome Announc. 2014 Nov 20;2(6). pii: e01106-14. doi: 10.1128/genomeA.01106-14.

19.

Molecular characterization of plasmid pMoma1of Moraxella macacae, a newly described bacterial pathogen of macaques.

Whitehouse CA, Ladner JT, Palacios GF.

Folia Microbiol (Praha). 2015 May;60(3):235-9. doi: 10.1007/s12223-014-0364-9. Epub 2014 Nov 15.

PMID:
25398380
20.

Reply to "Expanding the conversation on high-throughput virome sequencing standards to include consideration of microbial contamination sources".

Ladner JT, Wiley MR, Palacios G.

MBio. 2014 Oct 28;5(6):e02084. doi: 10.1128/mBio.02084-14. No abstract available.

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