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Results: 15

1.

Gene expression differences among three Neurospora species reveal genes required for sexual reproduction in Neurospora crassa.

Lehr NA, Wang Z, Li N, Hewitt DA, López-Giráldez F, Trail F, Townsend JP.

PLoS One. 2014 Oct 20;9(10):e110398. doi: 10.1371/journal.pone.0110398. eCollection 2014.

PMID:
25329823
[PubMed - in process]
Free PMC Article
2.

Single-Stranded γPNAs for In Vivo Site-Specific Genome Editing via Watson-Crick Recognition.

Bahal R, Quijano E, McNeer NA, Liu Y, Bhunia DC, Lopez-Giraldez F, Fields RJ, Saltzman WM, Ly DH, Glazer PM.

Curr Gene Ther. 2014;14(5):331-42.

PMID:
25174576
[PubMed - in process]
Free PMC Article
3.

A locus encompassing the Epstein-Barr virus bglf4 kinase regulates expression of genes encoding viral structural proteins.

El-Guindy A, Lopez-Giraldez F, Delecluse HJ, McKenzie J, Miller G.

PLoS Pathog. 2014 Aug 28;10(8):e1004307. doi: 10.1371/journal.ppat.1004307. eCollection 2014 Aug.

PMID:
25166506
[PubMed - in process]
Free PMC Article
4.

Global gene expression and focused knockout analysis reveals genes associated with fungal fruiting body development in Neurospora crassa.

Wang Z, Lopez-Giraldez F, Lehr N, Farré M, Common R, Trail F, Townsend JP.

Eukaryot Cell. 2014 Jan;13(1):154-69. doi: 10.1128/EC.00248-13. Epub 2013 Nov 15.

PMID:
24243796
[PubMed - indexed for MEDLINE]
Free PMC Article
5.

Evaluating phylogenetic informativeness as a predictor of phylogenetic signal for metazoan, fungal, and mammalian phylogenomic data sets.

López-Giráldez F, Moeller AH, Townsend JP.

Biomed Res Int. 2013;2013:621604. doi: 10.1155/2013/621604. Epub 2013 Jun 26.

PMID:
23878813
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

Molecular chaperone Hsp110 rescues a vesicle transport defect produced by an ALS-associated mutant SOD1 protein in squid axoplasm.

Song Y, Nagy M, Ni W, Tyagi NK, Fenton WA, López-Giráldez F, Overton JD, Horwich AL, Brady ST.

Proc Natl Acad Sci U S A. 2013 Apr 2;110(14):5428-33. doi: 10.1073/pnas.1303279110. Epub 2013 Mar 18.

PMID:
23509252
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

Sex-specific gene expression during asexual development of Neurospora crassa.

Wang Z, Kin K, López-Giráldez F, Johannesson H, Townsend JP.

Fungal Genet Biol. 2012 Jul;49(7):533-43. doi: 10.1016/j.fgb.2012.05.004. Epub 2012 May 22.

PMID:
22626843
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

Assessing the role of tandem repeats in shaping the genomic architecture of great apes.

Farré M, Bosch M, López-Giráldez F, Ponsà M, Ruiz-Herrera A.

PLoS One. 2011;6(11):e27239. doi: 10.1371/journal.pone.0027239. Epub 2011 Nov 4.

PMID:
22076140
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

PhyDesign: an online application for profiling phylogenetic informativeness.

López-Giráldez F, Townsend JP.

BMC Evol Biol. 2011 May 31;11:152. doi: 10.1186/1471-2148-11-152.

PMID:
21627831
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

Tasting soil fungal diversity with earth tongues: phylogenetic test of SATé alignments for environmental ITS data.

Wang Z, Nilsson RH, Lopez-Giraldez F, Zhuang WY, Dai YC, Johnston PR, Townsend JP.

PLoS One. 2011 Apr 21;6(4):e19039. doi: 10.1371/journal.pone.0019039.

PMID:
21533038
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

Multi-targeted priming for genome-wide gene expression assays.

Adomas AB, Lopez-Giraldez F, Clark TA, Wang Z, Townsend JP.

BMC Genomics. 2010 Aug 17;11:477. doi: 10.1186/1471-2164-11-477.

PMID:
20716356
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

LOX: inferring Level Of eXpression from diverse methods of census sequencing.

Zhang Z, López-Giráldez F, Townsend JP.

Bioinformatics. 2010 Aug 1;26(15):1918-9. doi: 10.1093/bioinformatics/btq303. Epub 2010 Jun 10.

PMID:
20538728
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

Measuring transcription factor-binding site turnover: a maximum likelihood approach using phylogenies.

Otto W, Stadler PF, López-Giraldéz F, Townsend JP, Lynch VJ, Wagner GP.

Genome Biol Evol. 2009 May 25;1:85-98. doi: 10.1093/gbe/evp010.

PMID:
20333180
[PubMed]
Free PMC Article
14.

RPS4Y gene family evolution in primates.

Andrés O, Kellermann T, López-Giráldez F, Rozas J, Domingo-Roura X, Bosch M.

BMC Evol Biol. 2008 May 13;8:142. doi: 10.1186/1471-2148-8-142.

PMID:
18477388
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

Analyses of carnivore microsatellites and their intimate association with tRNA-derived SINEs.

López-Giráldez F, Andrés O, Domingo-Roura X, Bosch M.

BMC Genomics. 2006 Oct 23;7:269.

PMID:
17059596
[PubMed - indexed for MEDLINE]
Free PMC Article
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