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Results: 1 to 20 of 89

1.

Human structural proteome-wide characterization of Cyclosporine A targets.

Hu G, Wang K, Groedendyk J, Barakat K, Mizianty MJ, Ruan J, Michalak M, Kurgan L.

Bioinformatics. 2014 Aug 28. pii: btu581. [Epub ahead of print]

PMID:
25172926
[PubMed - as supplied by publisher]
2.

Improved prediction of residue flexibility by embedding optimized amino acid grouping into RSA-based linear models.

Zhang H, Kurgan L.

Amino Acids. 2014 Aug 9. [Epub ahead of print]

PMID:
25106508
[PubMed - as supplied by publisher]
3.

Computational prediction of B cell epitopes from antigen sequences.

Gao J, Kurgan L.

Methods Mol Biol. 2014;1184:197-215. doi: 10.1007/978-1-4939-1115-8_11.

PMID:
25048126
[PubMed - in process]
4.

Exceptionally abundant exceptions: comprehensive characterization of intrinsic disorder in all domains of life.

Peng Z, Yan J, Fan X, Mizianty MJ, Xue B, Wang K, Hu G, Uversky VN, Kurgan L.

Cell Mol Life Sci. 2014 Jun 18. [Epub ahead of print]

PMID:
24939692
[PubMed - as supplied by publisher]
5.

Interplay between the oxidoreductase PDIA6 and microRNA-322 controls the response to disrupted endoplasmic reticulum calcium homeostasis.

Groenendyk J, Peng Z, Dudek E, Fan X, Mizianty MJ, Dufey E, Urra H, Sepulveda D, Rojas-Rivera D, Lim Y, Kim do H, Baretta K, Srikanth S, Gwack Y, Ahnn J, Kaufman RJ, Lee SK, Hetz C, Kurgan L, Michalak M.

Sci Signal. 2014 Jun 10;7(329):ra54. doi: 10.1126/scisignal.2004983.

PMID:
24917591
[PubMed - in process]
6.

Structural disorder in viral proteins.

Xue B, Blocquel D, Habchi J, Uversky AV, Kurgan L, Uversky VN, Longhi S.

Chem Rev. 2014 Jul 9;114(13):6880-911. doi: 10.1021/cr4005692. Epub 2014 May 13. No abstract available.

PMID:
24823319
[PubMed - in process]
7.

The intrinsic disorder status of the human hepatitis C virus proteome.

Fan X, Xue B, Dolan PT, LaCount DJ, Kurgan L, Uversky VN.

Mol Biosyst. 2014 Jun;10(6):1345-63. doi: 10.1039/c4mb00027g. Epub 2014 Apr 22.

PMID:
24752801
[PubMed - in process]
8.

Intrinsic disorder in the BK channel and its interactome.

Peng Z, Sakai Y, Kurgan L, Sokolowski B, Uversky V.

PLoS One. 2014 Apr 11;9(4):e94331. doi: 10.1371/journal.pone.0094331. eCollection 2014.

PMID:
24727949
[PubMed - in process]
Free PMC Article
9.

Disordered proteinaceous machines.

Fuxreiter M, Tóth-Petróczy Á, Kraut DA, Matouschek AT, Lim RY, Xue B, Kurgan L, Uversky VN.

Chem Rev. 2014 Jul 9;114(13):6806-43. doi: 10.1021/cr4007329. Epub 2014 Apr 4. No abstract available.

PMID:
24702702
[PubMed - in process]
10.

Prediction of intrinsic disorder in proteins using MFDp2.

Mizianty MJ, Uversky V, Kurgan L.

Methods Mol Biol. 2014;1137:147-62. doi: 10.1007/978-1-4939-0366-5_11.

PMID:
24573480
[PubMed - in process]
11.

Structural features important for differences in protein partitioning in aqueous dextran-polyethylene glycol two-phase systems of different ionic compositions.

Ferreira L, Fan X, Mikheeva LM, Madeira PP, Kurgan L, Uversky VN, Zaslavsky BY.

Biochim Biophys Acta. 2014 Mar;1844(3):694-704. doi: 10.1016/j.bbapap.2014.01.016. Epub 2014 Jan 30.

PMID:
24486798
[PubMed - indexed for MEDLINE]
12.

On the intrinsic disorder status of the major players in programmed cell death pathways.

Uversky AV, Xue B, Peng Z, Kurgan L, Uversky VN.

F1000Res. 2013 Sep 17;2:190. doi: 10.12688/f1000research.2-190.v1. eCollection 2013.

PMID:
24358900
[PubMed]
Free PMC Article
13.

Sequence-based Gaussian network model for protein dynamics.

Zhang H, Kurgan L.

Bioinformatics. 2014 Feb 15;30(4):497-505. doi: 10.1093/bioinformatics/btt716. Epub 2013 Dec 12.

PMID:
24336646
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

A creature with a hundred waggly tails: intrinsically disordered proteins in the ribosome.

Peng Z, Oldfield CJ, Xue B, Mizianty MJ, Dunker AK, Kurgan L, Uversky VN.

Cell Mol Life Sci. 2014 Apr;71(8):1477-504. doi: 10.1007/s00018-013-1446-6. Epub 2013 Aug 13.

PMID:
23942625
[PubMed - indexed for MEDLINE]
15.

Genome-scale prediction of proteins with long intrinsically disordered regions.

Peng Z, Mizianty MJ, Kurgan L.

Proteins. 2014 Jan;82(1):145-58. doi: 10.1002/prot.24348. Epub 2013 Sep 17.

PMID:
23798504
[PubMed - indexed for MEDLINE]
16.

Resilience of death: intrinsic disorder in proteins involved in the programmed cell death.

Peng Z, Xue B, Kurgan L, Uversky VN.

Cell Death Differ. 2013 Sep;20(9):1257-67. doi: 10.1038/cdd.2013.65. Epub 2013 Jun 14.

PMID:
23764774
[PubMed - indexed for MEDLINE]
Free PMC Article
17.

RAPID: fast and accurate sequence-based prediction of intrinsic disorder content on proteomic scale.

Yan J, Mizianty MJ, Filipow PL, Uversky VN, Kurgan L.

Biochim Biophys Acta. 2013 Aug;1834(8):1671-80. doi: 10.1016/j.bbapap.2013.05.022. Epub 2013 Jun 1.

PMID:
23732563
[PubMed - indexed for MEDLINE]
Free Article
18.

Prediction and characterization of cyclic proteins from sequences in three domains of life.

Kedarisetti P, Mizianty MJ, Kaas Q, Craik DJ, Kurgan L.

Biochim Biophys Acta. 2014 Jan;1844(1 Pt B):181-90. doi: 10.1016/j.bbapap.2013.05.002. Epub 2013 May 10.

PMID:
23669569
[PubMed - indexed for MEDLINE]
19.

Stochastic machines as a colocalization mechanism for scaffold protein function.

Xue B, Romero PR, Noutsou M, Maurice MM, Rüdiger SG, William AM Jr, Mizianty MJ, Kurgan L, Uversky VN, Dunker AK.

FEBS Lett. 2013 Jun 5;587(11):1587-91. doi: 10.1016/j.febslet.2013.04.006. Epub 2013 Apr 18.

PMID:
23603389
[PubMed - indexed for MEDLINE]
Free PMC Article
20.

Accurate prediction of disorder in protein chains with a comprehensive and empirically designed consensus.

Fan X, Kurgan L.

J Biomol Struct Dyn. 2014;32(3):448-64. doi: 10.1080/07391102.2013.775969. Epub 2013 Mar 27.

PMID:
23534882
[PubMed - indexed for MEDLINE]

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