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Results: 10

1.

CaPSID: a bioinformatics platform for computational pathogen sequence identification in human genomes and transcriptomes.

Borozan I, Wilson S, Blanchette P, Laflamme P, Watt SN, Krzyzanowski PM, Sircoulomb F, Rottapel R, Branton PE, Ferretti V.

BMC Bioinformatics. 2012 Aug 17;13:206. doi: 10.1186/1471-2105-13-206.

2.

Essential gene profiles in breast, pancreatic, and ovarian cancer cells.

Marcotte R, Brown KR, Suarez F, Sayad A, Karamboulas K, Krzyzanowski PM, Sircoulomb F, Medrano M, Fedyshyn Y, Koh JL, van Dyk D, Fedyshyn B, Luhova M, Brito GC, Vizeacoumar FJ, Vizeacoumar FS, Datti A, Kasimer D, Buzina A, Mero P, Misquitta C, Normand J, Haider M, Ketela T, Wrana JL, Rottapel R, Neel BG, Moffat J.

Cancer Discov. 2012 Feb;2(2):172-89. doi: 10.1158/2159-8290.CD-11-0224. Epub 2011 Dec 29.

3.

Computational approaches to discovering noncoding RNA.

Krzyzanowski PM, Muro EM, Andrade-Navarro MA.

Wiley Interdiscip Rev RNA. 2012 Jul-Aug;3(4):567-79. doi: 10.1002/wrna.1121. Epub 2012 May 3. Review.

PMID:
22555938
4.

Loss of Tankyrase-mediated destruction of 3BP2 is the underlying pathogenic mechanism of cherubism.

Levaot N, Voytyuk O, Dimitriou I, Sircoulomb F, Chandrakumar A, Deckert M, Krzyzanowski PM, Scotter A, Gu S, Janmohamed S, Cong F, Simoncic PD, Ueki Y, La Rose J, Rottapel R.

Cell. 2011 Dec 9;147(6):1324-39. doi: 10.1016/j.cell.2011.10.045.

5.

Integration of expressed sequence tag data flanking predicted RNA secondary structures facilitates novel non-coding RNA discovery.

Krzyzanowski PM, Price FD, Muro EM, Rudnicki MA, Andrade-Navarro MA.

PLoS One. 2011;6(6):e20561. doi: 10.1371/journal.pone.0020561. Epub 2011 Jun 15.

6.

Recent developments in StemBase: a tool to study gene expression in human and murine stem cells.

Sandie R, Palidwor GA, Huska MR, Porter CJ, Krzyzanowski PM, Muro EM, Perez-Iratxeta C, Andrade-Navarro MA.

BMC Res Notes. 2009 Mar 10;2:39. doi: 10.1186/1756-0500-2-39.

7.

StemBase: a resource for the analysis of stem cell gene expression data.

Porter CJ, Palidwor GA, Sandie R, Krzyzanowski PM, Muro EM, Perez-Iratxeta C, Andrade-Navarro MA.

Methods Mol Biol. 2007;407:137-48. doi: 10.1007/978-1-59745-536-7_11.

PMID:
18453254
8.

Identification of novel stem cell markers using gap analysis of gene expression data.

Krzyzanowski PM, Andrade-Navarro MA.

Genome Biol. 2007;8(9):R193.

9.

Protection of glioblastoma cells from cisplatin cytotoxicity via protein kinase Ciota-mediated attenuation of p38 MAP kinase signaling.

Baldwin RM, Garratt-Lalonde M, Parolin DA, Krzyzanowski PM, Andrade MA, Lorimer IA.

Oncogene. 2006 May 11;25(20):2909-19.

PMID:
16331246
10.

Study of stem cell function using microarray experiments.

Perez-Iratxeta C, Palidwor G, Porter CJ, Sanche NA, Huska MR, Suomela BP, Muro EM, Krzyzanowski PM, Hughes E, Campbell PA, Rudnicki MA, Andrade MA.

FEBS Lett. 2005 Mar 21;579(8):1795-801. Review.

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