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Items: 1 to 20 of 157

1.

A PCR assay detects a male-specific duplicated copy of Anti-Müllerian hormone (amh) in the lingcod (Ophiodon elongatus).

Rondeau EB, Laurie CV, Johnson SC, Koop BF.

BMC Res Notes. 2016 Apr 22;9(1):230. doi: 10.1186/s13104-016-2030-6.

PMID:
27103037
2.

The Atlantic salmon genome provides insights into rediploidization.

Lien S, Koop BF, Sandve SR, Miller JR, Kent MP, Nome T, Hvidsten TR, Leong JS, Minkley DR, Zimin A, Grammes F, Grove H, Gjuvsland A, Walenz B, Hermansen RA, von Schalburg K, Rondeau EB, Di Genova A, Samy JK, Olav Vik J, Vigeland MD, Caler L, Grimholt U, Jentoft S, Inge Våge D, de Jong P, Moen T, Baranski M, Palti Y, Smith DR, Yorke JA, Nederbragt AJ, Tooming-Klunderud A, Jakobsen KS, Jiang X, Fan D, Hu Y, Liberles DA, Vidal R, Iturra P, Jones SJ, Jonassen I, Maass A, Omholt SW, Davidson WS.

Nature. 2016 Apr 18. doi: 10.1038/nature17164. [Epub ahead of print]

PMID:
27088604
3.

Multi-tissue transcriptome profiles for coho salmon (Oncorhynchus kisutch), a species undergoing rediploidization following whole-genome duplication.

Kim JH, Leong JS, Koop BF, Devlin RH.

Mar Genomics. 2016 Feb;25:33-7. doi: 10.1016/j.margen.2015.11.008. Epub 2015 Nov 21.

PMID:
26614614
4.

Infectious hematopoietic necrosis virus (IHNV) persistence in Sockeye Salmon: influence on brain transcriptome and subsequent response to the viral mimic poly(I:C).

Müller A, Sutherland BJ, Koop BF, Johnson SC, Garver KA.

BMC Genomics. 2015 Aug 26;16:634. doi: 10.1186/s12864-015-1759-y.

PMID:
26306576
5.

Differential modulation of resistance biomarkers in skin of juvenile and mature pink salmon, Oncorhynchus gorbuscha by the salmon louse, Lepeophtheirus salmonis.

Braden LM, Barker DE, Koop BF, Jones SR.

Fish Shellfish Immunol. 2015 Nov;47(1):7-14. doi: 10.1016/j.fsi.2015.08.008. Epub 2015 Aug 10.

PMID:
26272636
6.

A comprehensive analysis of teleost MHC class I sequences.

Grimholt U, Tsukamoto K, Azuma T, Leong J, Koop BF, Dijkstra JM.

BMC Evol Biol. 2015 Mar 6;15:32. doi: 10.1186/s12862-015-0309-1.

PMID:
25888517
7.

Transcriptomic responses to emamectin benzoate in Pacific and Atlantic Canada salmon lice Lepeophtheirus salmonis with differing levels of drug resistance.

Sutherland BJ, Poley JD, Igboeli OO, Jantzen JR, Fast MD, Koop BF, Jones SR.

Evol Appl. 2015 Feb;8(2):133-48. doi: 10.1111/eva.12237. Epub 2014 Dec 22.

PMID:
25685190
8.

Signatures of resistance to Lepeophtheirus salmonis include a TH2-type response at the louse-salmon interface.

Braden LM, Koop BF, Jones SR.

Dev Comp Immunol. 2015 Jan;48(1):178-91. doi: 10.1016/j.dci.2014.09.015. Epub 2014 Oct 16.

PMID:
25453579
9.

Chemokine receptors in Atlantic salmon.

Grimholt U, Hauge H, Hauge AG, Leong J, Koop BF.

Dev Comp Immunol. 2015 Mar;49(1):79-95. doi: 10.1016/j.dci.2014.11.009. Epub 2014 Nov 15.

PMID:
25445904
10.

Atlantic salmon possesses two clusters of type I interferon receptor genes on different chromosomes, which allows for a larger repertoire of interferon receptors than in zebrafish and mammals.

Sun B, Greiner-Tollersrud L, Koop BF, Robertsen B.

Dev Comp Immunol. 2014 Dec;47(2):275-86. doi: 10.1016/j.dci.2014.08.007. Epub 2014 Aug 19.

PMID:
25149134
11.

The genome and linkage map of the northern pike (Esox lucius): conserved synteny revealed between the salmonid sister group and the Neoteleostei.

Rondeau EB, Minkley DR, Leong JS, Messmer AM, Jantzen JR, von Schalburg KR, Lemon C, Bird NH, Koop BF.

PLoS One. 2014 Jul 28;9(7):e102089. doi: 10.1371/journal.pone.0102089. eCollection 2014.

PMID:
25069045
12.

Comparative transcriptomics of Atlantic Salmo salar, chum Oncorhynchus keta and pink salmon O. gorbuscha during infections with salmon lice Lepeophtheirus salmonis.

Sutherland BJ, Koczka KW, Yasuike M, Jantzen SG, Yazawa R, Koop BF, Jones SR.

BMC Genomics. 2014 Mar 15;15:200. doi: 10.1186/1471-2164-15-200.

PMID:
24628956
13.

Divergent immunity and energetic programs in the gills of migratory and resident Oncorhynchus mykiss.

Sutherland BJ, Hanson KC, Jantzen JR, Koop BF, Smith CT.

Mol Ecol. 2014 Apr;23(8):1952-64. doi: 10.1111/mec.12713. Epub 2014 Apr 5.

PMID:
24612010
14.

Comprehensive analysis of MHC class II genes in teleost fish genomes reveals dispensability of the peptide-loading DM system in a large part of vertebrates.

Dijkstra JM, Grimholt U, Leong J, Koop BF, Hashimoto K.

BMC Evol Biol. 2013 Nov 26;13:260. doi: 10.1186/1471-2148-13-260.

PMID:
24279922
15.

Transcriptional responses in a Drosophila defensive symbiosis.

Hamilton PT, Leong JS, Koop BF, Perlman SJ.

Mol Ecol. 2014 Mar;23(6):1558-70. doi: 10.1111/mec.12603. Epub 2013 Dec 28.

PMID:
24274471
16.

Sex-specific expression and localization of aromatase and its regulators during embryonic and larval development of Atlantic salmon.

von Schalburg KR, Gowen BE, Messmer AM, Davidson WS, Koop BF.

Comp Biochem Physiol B Biochem Mol Biol. 2014 Feb;168:33-44. doi: 10.1016/j.cbpb.2013.11.004. Epub 2013 Nov 13.

PMID:
24239679
17.

Genomics of sablefish (Anoplopoma fimbria): expressed genes, mitochondrial phylogeny, linkage map and identification of a putative sex gene.

Rondeau EB, Messmer AM, Sanderson DS, Jantzen SG, von Schalburg KR, Minkley DR, Leong JS, Macdonald GM, Davidsen AE, Parker WA, Mazzola RS, Campbell B, Koop BF.

BMC Genomics. 2013 Jul 6;14:452. doi: 10.1186/1471-2164-14-452.

PMID:
23829495
18.

Sex-specific expression, synthesis and localization of aromatase regulators in one-year-old Atlantic salmon ovaries and testes.

von Schalburg KR, Gowen BE, Rondeau EB, Johnson NW, Minkley DR, Leong JS, Davidson WS, Koop BF.

Comp Biochem Physiol B Biochem Mol Biol. 2013 Apr;164(4):236-46. doi: 10.1016/j.cbpb.2013.01.004. Epub 2013 Feb 4.

PMID:
23391703
19.

Early response of gene expression in the distal intestine of Atlantic salmon (Salmo salar L.) during the development of soybean meal induced enteritis.

Sahlmann C, Sutherland BJ, Kortner TM, Koop BF, Krogdahl A, Bakke AM.

Fish Shellfish Immunol. 2013 Feb;34(2):599-609. doi: 10.1016/j.fsi.2012.11.031. Epub 2012 Dec 11.

PMID:
23246810
20.

Transcriptomics of coping strategies in free-swimming Lepeophtheirus salmonis (Copepoda) larvae responding to abiotic stress.

Sutherland BJ, Jantzen SG, Yasuike M, Sanderson DS, Koop BF, Jones SR.

Mol Ecol. 2012 Dec;21(24):6000-14. doi: 10.1111/mec.12072. Epub 2012 Oct 25.

PMID:
23094868
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