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Results: 1 to 20 of 689

1.

Polintons: a hotbed of eukaryotic virus, transposon and plasmid evolution.

Krupovic M, Koonin EV.

Nat Rev Microbiol. 2014 Dec 22. doi: 10.1038/nrmicro3389. [Epub ahead of print]

PMID:
25534808
[PubMed - as supplied by publisher]
2.

Evolution of adaptive immunity from transposable elements combined with innate immune systems.

Koonin EV, Krupovic M.

Nat Rev Genet. 2014 Dec 9. doi: 10.1038/nrg3859. [Epub ahead of print]

PMID:
25488578
[PubMed - as supplied by publisher]
3.

Virus-host arms race at the joint origin of multicellularity and programmed cell death.

Iranzo J, Lobkovsky AE, Wolf YI, Koonin EV.

Cell Cycle. 2014 Oct 1;13(19):3083-8. doi: 10.4161/15384101.2014.949496.

PMID:
25486567
[PubMed - in process]
4.

Expanded microbial genome coverage and improved protein family annotation in the COG database.

Galperin MY, Makarova KS, Wolf YI, Koonin EV.

Nucleic Acids Res. 2014 Nov 26. pii: gku1223. [Epub ahead of print]

PMID:
25428365
[PubMed - as supplied by publisher]
Free Article
5.

MitoCOGs: clusters of orthologous genes from mitochondria and implications for the evolution of eukaryotes.

Kannan S, Rogozin IB, Koonin EV.

BMC Evol Biol. 2014 Nov 25;14(1):237. [Epub ahead of print]

PMID:
25421434
[PubMed - as supplied by publisher]
Free PMC Article
6.

Chordopoxvirus protein F12 implicated in enveloped virion morphogenesis is an inactivated DNA polymerase.

Yutin N, Faure G, Koonin EV, Mushegian AR.

Biol Direct. 2014 Nov 6;9(1):22. doi: 10.1186/1745-6150-9-22.

PMID:
25374149
[PubMed - in process]
Free Article
7.

Horizontal transfer beyond genes.

Koonin EV.

Proc Natl Acad Sci U S A. 2014 Nov 11;111(45):15865-6. doi: 10.1073/pnas.1418789111. Epub 2014 Oct 30. No abstract available.

PMID:
25359214
[PubMed - in process]
8.

Evolution of the CRISPR-Cas adaptive immunity systems in prokaryotes: models and observations on virus-host coevolution.

Koonin EV, Wolf YI.

Mol Biosyst. 2015 Jan 2;11(1):20-7. doi: 10.1039/c4mb00438h. Epub 2014 Sep 19.

PMID:
25238531
[PubMed - in process]
9.

The evolutionary journey of Argonaute proteins.

Swarts DC, Makarova K, Wang Y, Nakanishi K, Ketting RF, Koonin EV, Patel DJ, van der Oost J.

Nat Struct Mol Biol. 2014 Sep;21(9):743-53. doi: 10.1038/nsmb.2879. Review.

PMID:
25192263
[PubMed - indexed for MEDLINE]
10.

Genomes in turmoil: quantification of genome dynamics in prokaryote supergenomes.

Puigbò P, Lobkovsky AE, Kristensen DM, Wolf YI, Koonin EV.

BMC Biol. 2014 Aug 21;12:66. doi: 10.1186/s12915-014-0066-4.

PMID:
25141959
[PubMed - in process]
Free PMC Article
11.

Dark matter in archaeal genomes: a rich source of novel mobile elements, defense systems and secretory complexes.

Makarova KS, Wolf YI, Forterre P, Prangishvili D, Krupovic M, Koonin EV.

Extremophiles. 2014 Sep;18(5):877-93. doi: 10.1007/s00792-014-0672-7. Epub 2014 Aug 12.

PMID:
25113822
[PubMed - in process]
Free PMC Article
12.

Evolution of replicative DNA polymerases in archaea and their contributions to the eukaryotic replication machinery.

Makarova KS, Krupovic M, Koonin EV.

Front Microbiol. 2014 Jul 21;5:354. doi: 10.3389/fmicb.2014.00354. eCollection 2014. Review.

PMID:
25101062
[PubMed]
Free PMC Article
13.

Origin of giant viruses from smaller DNA viruses not from a fourth domain of cellular life.

Yutin N, Wolf YI, Koonin EV.

Virology. 2014 Oct;466-467:38-52. doi: 10.1016/j.virol.2014.06.032. Epub 2014 Jul 17.

PMID:
25042053
[PubMed - in process]
Free Article
14.

Calorie restriction à Lamarck.

Koonin EV.

Cell. 2014 Jul 17;158(2):237-8. doi: 10.1016/j.cell.2014.07.004.

PMID:
25036622
[PubMed - indexed for MEDLINE]
15.

Impairment of translation in neurons as a putative causative factor for autism.

Poliakov E, Koonin EV, Rogozin IB.

Biol Direct. 2014 Jul 10;9:16. doi: 10.1186/1745-6150-9-16.

PMID:
25011470
[PubMed - in process]
Free PMC Article
16.

Pseudo-chaotic oscillations in CRISPR-virus coevolution predicted by bifurcation analysis.

Berezovskaya FS, Wolf YI, Koonin EV, Karev GP.

Biol Direct. 2014 Jul 2;9:13. doi: 10.1186/1745-6150-9-13.

PMID:
24986220
[PubMed - in process]
Free PMC Article
17.
18.

Casposons: a new superfamily of self-synthesizing DNA transposons at the origin of prokaryotic CRISPR-Cas immunity.

Krupovic M, Makarova KS, Forterre P, Prangishvili D, Koonin EV.

BMC Biol. 2014 May 19;12:36. doi: 10.1186/1741-7007-12-36.

PMID:
24884953
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

Virus world as an evolutionary network of viruses and capsidless selfish elements.

Koonin EV, Dolja VV.

Microbiol Mol Biol Rev. 2014 Jun;78(2):278-303. doi: 10.1128/MMBR.00049-13.

PMID:
24847023
[PubMed - in process]
20.

CARF and WYL domains: ligand-binding regulators of prokaryotic defense systems.

Makarova KS, Anantharaman V, Grishin NV, Koonin EV, Aravind L.

Front Genet. 2014 Apr 30;5:102. doi: 10.3389/fgene.2014.00102. eCollection 2014.

PMID:
24817877
[PubMed]
Free PMC Article

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