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Results: 1 to 20 of 329

1.

Tempo and Mode of Transposable Element Activity in Drosophila.

Kofler R, Nolte V, Schlötterer C.

PLoS Genet. 2015 Jul 17;11(7):e1005406. doi: 10.1371/journal.pgen.1005406. eCollection 2015 Jul.

2.

The p53 binding protein PDCD5 is not rate-limiting in DNA damage induced cell death.

Bock FJ, Tanzer MC, Haschka MD, Krumschnabel G, Sohm B, Goetsch K, Kofler R, Villunger A.

Sci Rep. 2015 Jun 11;5:11268. doi: 10.1038/srep11268.

3.

The impact of library preparation protocols on the consistency of allele frequency estimates in Pool-Seq data.

Kofler R, Nolte V, Schlötterer C.

Mol Ecol Resour. 2015 May 26. doi: 10.1111/1755-0998.12432. [Epub ahead of print]

PMID:
26014582
4.

The recent invasion of natural Drosophila simulans populations by the P-element.

Kofler R, Hill T, Nolte V, Betancourt AJ, Schlötterer C.

Proc Natl Acad Sci U S A. 2015 May 26;112(21):6659-63. doi: 10.1073/pnas.1500758112. Epub 2015 May 11.

5.

Gaussian process test for high-throughput sequencing time series: application to experimental evolution.

Topa H, Jónás Á, Kofler R, Kosiol C, Honkela A.

Bioinformatics. 2015 Jun 1;31(11):1762-70. doi: 10.1093/bioinformatics/btv014. Epub 2015 Jan 21.

6.

The role of the Janus-faced transcription factor PAX5-JAK2 in acute lymphoblastic leukemia.

Schinnerl D, Fortschegger K, Kauer M, Marchante JR, Kofler R, Den Boer ML, Strehl S.

Blood. 2015 Feb 19;125(8):1282-91. doi: 10.1182/blood-2014-04-570960. Epub 2014 Dec 16.

7.

Combining experimental evolution with next-generation sequencing: a powerful tool to study adaptation from standing genetic variation.

Schlötterer C, Kofler R, Versace E, Tobler R, Franssen SU.

Heredity (Edinb). 2015 May;114(5):431-40. doi: 10.1038/hdy.2014.86. Epub 2014 Oct 1. Review.

PMID:
25269380
8.

C10ORF10/DEPP, a transcriptional target of FOXO3, regulates ROS-sensitivity in human neuroblastoma.

Salcher S, Hagenbuchner J, Geiger K, Seiter MA, Rainer J, Kofler R, Hermann M, Kiechl-Kohlendorfer U, Ausserlechner MJ, Obexer P.

Mol Cancer. 2014 Sep 28;13:224. doi: 10.1186/1476-4598-13-224.

9.

Sequencing pools of individuals - mining genome-wide polymorphism data without big funding.

Schlötterer C, Tobler R, Kofler R, Nolte V.

Nat Rev Genet. 2014 Nov;15(11):749-63. doi: 10.1038/nrg3803. Epub 2014 Sep 23. Review.

PMID:
25246196
10.

The synthetic glucocorticoids prednisolone and dexamethasone regulate the same genes in acute lymphoblastic leukemia cells.

Bindreither D, Ecker S, Gschirr B, Kofler A, Kofler R, Rainer J.

BMC Genomics. 2014 Aug 7;15:662. doi: 10.1186/1471-2164-15-662.

11.

Development of a multipurpose GATEWAY-based lentiviral tetracycline-regulated conditional RNAi system (GLTR).

Sigl R, Ploner C, Shivalingaiah G, Kofler R, Geley S.

PLoS One. 2014 May 19;9(5):e97764. doi: 10.1371/journal.pone.0097764. eCollection 2014.

12.

Differential neuronal targeting of a new and two known calcium channel β4 subunit splice variants correlates with their regulation of gene expression.

Etemad S, Obermair GJ, Bindreither D, Benedetti A, Stanika R, Di Biase V, Burtscher V, Koschak A, Kofler R, Geley S, Wille A, Lusser A, Flockerzi V, Flucher BE.

J Neurosci. 2014 Jan 22;34(4):1446-61. doi: 10.1523/JNEUROSCI.3935-13.2014.

13.

Translational profiling in childhood acute lymphoblastic leukemia: no evidence for glucocorticoid regulation of mRNA translation.

Aneichyk T, Bindreither D, Mantinger C, Grazio D, Goetsch K, Kofler R, Rainer J.

BMC Genomics. 2013 Dec 1;14:844. doi: 10.1186/1471-2164-14-844.

14.

A guide for the design of evolve and resequencing studies.

Kofler R, Schlötterer C.

Mol Biol Evol. 2014 Feb;31(2):474-83. doi: 10.1093/molbev/mst221. Epub 2013 Nov 9.

15.

Massive habitat-specific genomic response in D. melanogaster populations during experimental evolution in hot and cold environments.

Tobler R, Franssen SU, Kofler R, Orozco-Terwengel P, Nolte V, Hermisson J, Schlötterer C.

Mol Biol Evol. 2014 Feb;31(2):364-75. doi: 10.1093/molbev/mst205. Epub 2013 Oct 22.

16.

Variability in functional p53 reactivation by PRIMA-1(Met)/APR-246 in Ewing sarcoma.

Aryee DN, Niedan S, Ban J, Schwentner R, Muehlbacher K, Kauer M, Kofler R, Kovar H.

Br J Cancer. 2013 Nov 12;109(10):2696-704. doi: 10.1038/bjc.2013.635. Epub 2013 Oct 15.

17.

Suppression of FOXO1 is responsible for a growth regulatory repressive transcriptional sub-signature of EWS-FLI1 in Ewing sarcoma.

Niedan S, Kauer M, Aryee DN, Kofler R, Schwentner R, Meier A, Pötschger U, Kontny U, Kovar H.

Oncogene. 2014 Jul 24;33(30):3927-38. doi: 10.1038/onc.2013.361. Epub 2013 Sep 2.

18.

Chinese hamster genome sequenced from sorted chromosomes.

Brinkrolf K, Rupp O, Laux H, Kollin F, Ernst W, Linke B, Kofler R, Romand S, Hesse F, Budach WE, Galosy S, Müller D, Noll T, Wienberg J, Jostock T, Leonard M, Grillari J, Tauch A, Goesmann A, Helk B, Mott JE, Pühler A, Borth N.

Nat Biotechnol. 2013 Aug;31(8):694-5. doi: 10.1038/nbt.2645. No abstract available.

PMID:
23929341
19.

The p27-Skp2 axis mediates glucocorticoid-induced cell cycle arrest in T-lymphoma cells.

Kullmann MK, Grubbauer C, Goetsch K, Jäkel H, Podmirseg SR, Trockenbacher A, Ploner C, Cato AC, Weiss C, Kofler R, Hengst L.

Cell Cycle. 2013 Aug 15;12(16):2625-35. doi: 10.4161/cc.25622. Epub 2013 Jul 9.

20.

Microarray and deep sequencing cross-platform analysis of the mirRNome and isomiR variation in response to epidermal growth factor.

Llorens F, Hummel M, Pantano L, Pastor X, Vivancos A, Castillo E, Mattlin H, Ferrer A, Ingham M, Noguera M, Kofler R, Dohm JC, Pluvinet R, Bayés M, Himmelbauer H, del Rio JA, Martí E, Sumoy L.

BMC Genomics. 2013 Jun 1;14:371. doi: 10.1186/1471-2164-14-371.

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