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Results: 1 to 20 of 39

1.

The era of integrative genomics: more data or better methods?

Koestler DC, Jones M, Kobor M.

Epigenomics. 2014;6(5):463-7. doi: 10.2217/epi.14.44. No abstract available.

PMID:
25431938
[PubMed - in process]
2.

Fetal exposures and perinatal influences on the stool microbiota of premature infants.

Chernikova DA, Koestler DC, Hoen AG, Housman ML, Hibberd PL, Moore JH, Morrison HG, Sogin ML, Zain-Ul-Abideen M, Madan JC.

J Matern Fetal Neonatal Med. 2014 Dec 16:1-7. [Epub ahead of print]

PMID:
25394613
[PubMed - as supplied by publisher]
3.

A recursively partitioned mixture model for clustering time-course gene expression data.

Koestler DC, Marsit CJ, Christensen BC, Kelsey KT, Houseman EA.

Transl Cancer Res. 2014;3(3):217-232.

PMID:
25346887
[PubMed]
Free PMC Article
4.

Integrative clustering methods for high-dimensional molecular data.

Chalise P, Koestler DC, Bimali M, Yu Q, Fridley BL.

Transl Cancer Res. 2014 Jun 1;3(3):202-216.

PMID:
25243110
[PubMed]
Free PMC Article
5.

Placental FKBP5 genetic and epigenetic variation is associated with infant neurobehavioral outcomes in the RICHS cohort.

Paquette AG, Lester BM, Koestler DC, Lesseur C, Armstrong DA, Marsit CJ.

PLoS One. 2014 Aug 12;9(8):e104913. doi: 10.1371/journal.pone.0104913. eCollection 2014.

PMID:
25115650
[PubMed - in process]
Free PMC Article
6.

Methylation of leukocyte DNA and ovarian cancer: relationships with disease status and outcome.

Fridley BL, Armasu SM, Cicek MS, Larson MC, Wang C, Winham SJ, Kalli KR, Koestler DC, Rider DN, Shridhar V, Olson JE, Cunningham JM, Goode EL.

BMC Med Genomics. 2014 Apr 28;7:21. doi: 10.1186/1755-8794-7-21.

PMID:
24774302
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

Individualizing care for ovarian cancer patients using big data.

Fridley BL, Koestler DC, Godwin AK.

J Natl Cancer Inst. 2014 Apr 3;106(5). pii: dju080. doi: 10.1093/jnci/dju080. No abstract available. Erratum in: J Natl Cancer Inst. 2014 Aug;106(8):dju234 doi:10.1093/jnci/dju234. Devin C. Koeslter [corrected to Devin C. Koestler].

PMID:
24700802
[PubMed - indexed for MEDLINE]
8.

Leukocyte-adjusted epigenome-wide association studies of blood from solid tumor patients.

Langevin SM, Houseman EA, Accomando WP, Koestler DC, Christensen BC, Nelson HH, Karagas MR, Marsit CJ, Wiencke JK, Kelsey KT.

Epigenetics. 2014 Jun;9(6):884-95. doi: 10.4161/epi.28575. Epub 2014 Mar 26.

PMID:
24671036
[PubMed - in process]
9.

Sex-specific associations between placental leptin promoter DNA methylation and infant neurobehavior.

Lesseur C, Armstrong DA, Murphy MA, Appleton AA, Koestler DC, Paquette AG, Lester BM, Marsit CJ.

Psychoneuroendocrinology. 2014 Feb;40:1-9. doi: 10.1016/j.psyneuen.2013.10.012. Epub 2013 Oct 30.

PMID:
24485470
[PubMed - indexed for MEDLINE]
10.

Integrative genomic analysis identifies epigenetic marks that mediate genetic risk for epithelial ovarian cancer.

Koestler DC, Chalise P, Cicek MS, Cunningham JM, Armasu S, Larson MC, Chien J, Block M, Kalli KR, Sellers TA, Fridley BL, Goode EL.

BMC Med Genomics. 2014 Jan 30;7:8. doi: 10.1186/1755-8794-7-8.

PMID:
24479488
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

Placental DNA methylation alterations associated with maternal tobacco smoking at the RUNX3 gene are also associated with gestational age.

Maccani JZ, Koestler DC, Houseman EA, Marsit CJ, Kelsey KT.

Epigenomics. 2013 Dec;5(6):619-30. doi: 10.2217/epi.13.63.

PMID:
24283877
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

Age-related DNA methylation in normal breast tissue and its relationship with invasive breast tumor methylation.

Johnson KC, Koestler DC, Cheng C, Christensen BC.

Epigenetics. 2014 Feb;9(2):268-75. doi: 10.4161/epi.27015. Epub 2013 Nov 6.

PMID:
24196486
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

Developmental genes targeted for epigenetic variation between twin-twin transfusion syndrome children.

Marsit CJ, Koestler DC, Watson-Smith D, Boney CM, Padbury JF, Luks F.

Clin Epigenetics. 2013 Oct 3;5(1):18. doi: 10.1186/1868-7083-5-18.

PMID:
24090360
[PubMed]
Free PMC Article
14.

Review of processing and analysis methods for DNA methylation array data.

Wilhelm-Benartzi CS, Koestler DC, Karagas MR, Flanagan JM, Christensen BC, Kelsey KT, Marsit CJ, Houseman EA, Brown R.

Br J Cancer. 2013 Sep 17;109(6):1394-402. doi: 10.1038/bjc.2013.496. Epub 2013 Aug 27. Review.

PMID:
23982603
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

Tissue-specific Leptin promoter DNA methylation is associated with maternal and infant perinatal factors.

Lesseur C, Armstrong DA, Paquette AG, Koestler DC, Padbury JF, Marsit CJ.

Mol Cell Endocrinol. 2013 Dec 5;381(1-2):160-7. doi: 10.1016/j.mce.2013.07.024. Epub 2013 Jul 30.

PMID:
23911897
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

Blood-based profiles of DNA methylation predict the underlying distribution of cell types: a validation analysis.

Koestler DC, Christensen B, Karagas MR, Marsit CJ, Langevin SM, Kelsey KT, Wiencke JK, Houseman EA.

Epigenetics. 2013 Aug;8(8):816-26. doi: 10.4161/epi.25430. Epub 2013 Jun 25.

PMID:
23903776
[PubMed - indexed for MEDLINE]
Free PMC Article
17.

Placental HTR2A methylation is associated with infant neurobehavioral outcomes.

Paquette AG, Lesseur C, Armstrong DA, Koestler DC, Appleton AA, Lester BM, Marsit CJ.

Epigenetics. 2013 Aug;8(8):796-801. doi: 10.4161/epi.25358. Epub 2013 Jun 19.

PMID:
23880519
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

Distinct patterns of DNA methylation in conventional adenomas involving the right and left colon.

Koestler DC, Li J, Baron JA, Tsongalis GJ, Butterly LF, Goodrich M, Lesseur C, Karagas MR, Marsit CJ, Moore JH, Andrew AS, Srivastava A.

Mod Pathol. 2014 Jan;27(1):145-55. doi: 10.1038/modpathol.2013.104. Epub 2013 Jul 19.

PMID:
23868178
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

Association between In Utero arsenic exposure, placental gene expression, and infant birth weight: a US birth cohort study.

Fei DL, Koestler DC, Li Z, Giambelli C, Sanchez-Mejias A, Gosse JA, Marsit CJ, Karagas MR, Robbins DJ.

Environ Health. 2013 Jul 16;12:58. doi: 10.1186/1476-069X-12-58.

PMID:
23866971
[PubMed - indexed for MEDLINE]
Free PMC Article
20.

Differential DNA methylation in umbilical cord blood of infants exposed to low levels of arsenic in utero.

Koestler DC, Avissar-Whiting M, Houseman EA, Karagas MR, Marsit CJ.

Environ Health Perspect. 2013 Aug;121(8):971-7. doi: 10.1289/ehp.1205925. Epub 2013 Jun 7.

PMID:
23757598
[PubMed - indexed for MEDLINE]
Free PMC Article

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