Format
Items per page
Sort by

Send to:

Choose Destination

Results: 1 to 20 of 36

1.

Productive mRNA stem loop-mediated transcriptional slippage: Crucial features in common with intrinsic terminators.

Penno C, Sharma V, Coakley A, O'Connell Motherway M, van Sinderen D, Lubkowska L, Kireeva ML, Kashlev M, Baranov PV, Atkins JF.

Proc Natl Acad Sci U S A. 2015 Apr 6. pii: 201418384. [Epub ahead of print]

2.

Direct competition assay for transcription fidelity.

Lubkowska L, Kireeva ML.

Methods Mol Biol. 2015;1276:153-64. doi: 10.1007/978-1-4939-2392-2_8.

PMID:
25665562
3.

A genetic assay for transcription errors reveals multilayer control of RNA polymerase II fidelity.

Irvin JD, Kireeva ML, Gotte DR, Shafer BK, Huang I, Kashlev M, Strathern JN.

PLoS Genet. 2014 Sep 18;10(9):e1004532. doi: 10.1371/journal.pgen.1004532. eCollection 2014 Sep.

4.

Coliphage HK022 Nun protein inhibits RNA polymerase translocation.

Vitiello CL, Kireeva ML, Lubkowska L, Kashlev M, Gottesman M.

Proc Natl Acad Sci U S A. 2014 Jun 10;111(23):E2368-75. doi: 10.1073/pnas.1319740111. Epub 2014 May 22.

5.

RNA polymerase structure, function, regulation, dynamics, fidelity, and roles in gene expression.

Kireeva ML, Kashlev M, Burton ZF.

Chem Rev. 2013 Nov 13;113(11):8325-30. doi: 10.1021/cr400436m. No abstract available.

6.

Co-transcriptional production of RNA-DNA hybrids for simultaneous release of multiple split functionalities.

Afonin KA, Desai R, Viard M, Kireeva ML, Bindewald E, Case CL, Maciag AE, Kasprzak WK, Kim T, Sappe A, Stepler M, Kewalramani VN, Kashlev M, Blumenthal R, Shapiro BA.

Nucleic Acids Res. 2014 Feb;42(3):2085-97. doi: 10.1093/nar/gkt1001. Epub 2013 Nov 4.

7.

Complete dissection of transcription elongation reveals slow translocation of RNA polymerase II in a linear ratchet mechanism.

Dangkulwanich M, Ishibashi T, Liu S, Kireeva ML, Lubkowska L, Kashlev M, Bustamante CJ.

Elife. 2013 Sep 24;2:e00971. doi: 10.7554/eLife.00971.

8.

Intrinsic translocation barrier as an initial step in pausing by RNA polymerase II.

Imashimizu M, Kireeva ML, Lubkowska L, Gotte D, Parks AR, Strathern JN, Kashlev M.

J Mol Biol. 2013 Feb 22;425(4):697-712. doi: 10.1016/j.jmb.2012.12.002. Epub 2012 Dec 10.

PMID:
23238253
9.

The RNA polymerase bridge helix YFI motif in catalysis, fidelity and translocation.

Nedialkov YA, Opron K, Assaf F, Artsimovitch I, Kireeva ML, Kashlev M, Cukier RI, Nudler E, Burton ZF.

Biochim Biophys Acta. 2013 Feb;1829(2):187-98. doi: 10.1016/j.bbagrm.2012.11.005. Epub 2012 Nov 30.

10.

Sensitivity of mitochondrial transcription and resistance of RNA polymerase II dependent nuclear transcription to antiviral ribonucleosides.

Arnold JJ, Sharma SD, Feng JY, Ray AS, Smidansky ED, Kireeva ML, Cho A, Perry J, Vela JE, Park Y, Xu Y, Tian Y, Babusis D, Barauskus O, Peterson BR, Gnatt A, Kashlev M, Zhong W, Cameron CE.

PLoS Pathog. 2012;8(11):e1003030. doi: 10.1371/journal.ppat.1003030. Epub 2012 Nov 15.

11.

Molecular dynamics and mutational analysis of the catalytic and translocation cycle of RNA polymerase.

Kireeva ML, Opron K, Seibold SA, Domecq C, Cukier RI, Coulombe B, Kashlev M, Burton ZF.

BMC Biophys. 2012 Jun 7;5:11. doi: 10.1186/2046-1682-5-11.

12.

Mechanism of translesion transcription by RNA polymerase II and its role in cellular resistance to DNA damage.

Walmacq C, Cheung AC, Kireeva ML, Lubkowska L, Ye C, Gotte D, Strathern JN, Carell T, Cramer P, Kashlev M.

Mol Cell. 2012 Apr 13;46(1):18-29. doi: 10.1016/j.molcel.2012.02.006. Epub 2012 Mar 8.

13.

Interaction of RNA polymerase II fork loop 2 with downstream non-template DNA regulates transcription elongation.

Kireeva ML, Domecq C, Coulombe B, Burton ZF, Kashlev M.

J Biol Chem. 2011 Sep 2;286(35):30898-910. doi: 10.1074/jbc.M111.260844. Epub 2011 Jul 5.

14.

Synergistic action of RNA polymerases in overcoming the nucleosomal barrier.

Jin J, Bai L, Johnson DS, Fulbright RM, Kireeva ML, Kashlev M, Wang MD.

Nat Struct Mol Biol. 2010 Jun;17(6):745-52. doi: 10.1038/nsmb.1798. Epub 2010 May 9.

15.

Rpb9 subunit controls transcription fidelity by delaying NTP sequestration in RNA polymerase II.

Walmacq C, Kireeva ML, Irvin J, Nedialkov Y, Lubkowska L, Malagon F, Strathern JN, Kashlev M.

J Biol Chem. 2009 Jul 17;284(29):19601-12. doi: 10.1074/jbc.M109.006908. Epub 2009 May 13.

16.

Mechanism of sequence-specific pausing of bacterial RNA polymerase.

Kireeva ML, Kashlev M.

Proc Natl Acad Sci U S A. 2009 Jun 2;106(22):8900-5. doi: 10.1073/pnas.0900407106. Epub 2009 Apr 24.

17.

Transient reversal of RNA polymerase II active site closing controls fidelity of transcription elongation.

Kireeva ML, Nedialkov YA, Cremona GH, Purtov YA, Lubkowska L, Malagon F, Burton ZF, Strathern JN, Kashlev M.

Mol Cell. 2008 Jun 6;30(5):557-66. doi: 10.1016/j.molcel.2008.04.017.

18.

Effects of Friedreich's ataxia (GAA)n*(TTC)n repeats on RNA synthesis and stability.

Krasilnikova MM, Kireeva ML, Petrovic V, Knijnikova N, Kashlev M, Mirkin SM.

Nucleic Acids Res. 2007;35(4):1075-84. Epub 2007 Jan 30.

19.

Mutations in the Saccharomyces cerevisiae RPB1 gene conferring hypersensitivity to 6-azauracil.

Malagon F, Kireeva ML, Shafer BK, Lubkowska L, Kashlev M, Strathern JN.

Genetics. 2006 Apr;172(4):2201-9. Epub 2006 Mar 1.

20.

Nature of the nucleosomal barrier to RNA polymerase II.

Kireeva ML, Hancock B, Cremona GH, Walter W, Studitsky VM, Kashlev M.

Mol Cell. 2005 Apr 1;18(1):97-108.

Format
Items per page
Sort by

Send to:

Choose Destination

Supplemental Content

Loading ...
Write to the Help Desk