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Results: 1 to 20 of 34

1.

The evolution of peafowl and other taxa with ocelli (eyespots): a phylogenomic approach.

Sun K, Meiklejohn KA, Faircloth BC, Glenn TC, Braun EL, Kimball RT.

Proc Biol Sci. 2014 Sep 7;281(1790). pii: 20140823. doi: 10.1098/rspb.2014.0823.

PMID:
25030982
[PubMed - in process]
2.

Incongruence among different mitochondrial regions: A case study using complete mitogenomes.

Meiklejohn KA, Danielson MJ, Faircloth BC, Glenn TC, Braun EL, Kimball RT.

Mol Phylogenet Evol. 2014 Jun 12;78C:314-323. doi: 10.1016/j.ympev.2014.06.003. [Epub ahead of print]

PMID:
24929245
[PubMed - as supplied by publisher]
3.

Does more sequence data improve estimates of galliform phylogeny? Analyses of a rapid radiation using a complete data matrix.

Kimball RT, Braun EL.

PeerJ. 2014 Apr 22;2:e361. doi: 10.7717/peerj.361. eCollection 2014.

PMID:
24795852
[PubMed]
Free PMC Article
4.

Geographic variation in the acoustic traits of greater horseshoe bats: testing the importance of drift and ecological selection in evolutionary processes.

Sun K, Luo L, Kimball RT, Wei X, Jin L, Jiang T, Li G, Feng J.

PLoS One. 2013 Aug 8;8(8):e70368. doi: 10.1371/journal.pone.0070368. eCollection 2013.

PMID:
23950926
[PubMed - indexed for MEDLINE]
Free PMC Article
5.

Identifying localized biases in large datasets: a case study using the avian tree of life.

Kimball RT, Wang N, Heimer-McGinn V, Ferguson C, Braun EL.

Mol Phylogenet Evol. 2013 Dec;69(3):1021-32. doi: 10.1016/j.ympev.2013.05.029. Epub 2013 Jun 20.

PMID:
23791948
[PubMed - indexed for MEDLINE]
6.

Assessing phylogenetic relationships among galliformes: a multigene phylogeny with expanded taxon sampling in Phasianidae.

Wang N, Kimball RT, Braun EL, Liang B, Zhang Z.

PLoS One. 2013 May 31;8(5):e64312. doi: 10.1371/journal.pone.0064312. Print 2013.

PMID:
23741315
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

Parsimony and model-based analyses of indels in avian nuclear genes reveal congruent and incongruent phylogenetic signals.

Yuri T, Kimball RT, Harshman J, Bowie RC, Braun MJ, Chojnowski JL, Han KL, Hackett SJ, Huddleston CJ, Moore WS, Reddy S, Sheldon FH, Steadman DW, Witt CC, Braun EL.

Biology (Basel). 2013 Mar 13;2(1):419-44. doi: 10.3390/biology2010419.

PMID:
24832669
[PubMed]
Free PMC Article
8.

Ratite nonmonophyly: independent evidence from 40 novel Loci.

Smith JV, Braun EL, Kimball RT.

Syst Biol. 2013 Jan 1;62(1):35-49. doi: 10.1093/sysbio/sys067. Epub 2012 Jul 24.

PMID:
22831877
[PubMed - indexed for MEDLINE]
9.

Testing hypotheses about the sister group of the passeriformes using an independent 30-locus data set.

Wang N, Braun EL, Kimball RT.

Mol Biol Evol. 2012 Feb;29(2):737-50. doi: 10.1093/molbev/msr230. Epub 2011 Sep 22.

PMID:
21940640
[PubMed - indexed for MEDLINE]
Free Article
10.

A macroevolutionary perspective on multiple sexual traits in the phasianidae (galliformes).

Kimball RT, Mary CM, Braun EL.

Int J Evol Biol. 2011;2011:423938. doi: 10.4061/2011/423938. Epub 2011 May 2.

PMID:
21716735
[PubMed]
Free PMC Article
11.

Homoplastic microinversions and the avian tree of life.

Braun EL, Kimball RT, Han KL, Iuhasz-Velez NR, Bonilla AJ, Chojnowski JL, Smith JV, Bowie RC, Braun MJ, Hackett SJ, Harshman J, Huddleston CJ, Marks BD, Miglia KJ, Moore WS, Reddy S, Sheldon FH, Witt CC, Yuri T.

BMC Evol Biol. 2011 May 25;11:141. doi: 10.1186/1471-2148-11-141.

PMID:
21612607
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

Are transposable element insertions homoplasy free?: an examination using the avian tree of life.

Han KL, Braun EL, Kimball RT, Reddy S, Bowie RC, Braun MJ, Chojnowski JL, Hackett SJ, Harshman J, Huddleston CJ, Marks BD, Miglia KJ, Moore WS, Sheldon FH, Steadman DW, Witt CC, Yuri T.

Syst Biol. 2011 May;60(3):375-86. doi: 10.1093/sysbio/syq100. Epub 2011 Feb 8. No abstract available.

PMID:
21303823
[PubMed - indexed for MEDLINE]
13.

Dispersers shape fruit diversity in Ficus (Moraceae).

Lomáscolo SB, Levey DJ, Kimball RT, Bolker BM, Alborn HT.

Proc Natl Acad Sci U S A. 2010 Aug 17;107(33):14668-72. doi: 10.1073/pnas.1008773107. Epub 2010 Aug 2.

PMID:
20679219
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

Comparative molecular evolution and phylogenetic utility of 3'-UTRs and introns in Galliformes.

Bonilla AJ, Braun EL, Kimball RT.

Mol Phylogenet Evol. 2010 Aug;56(2):536-42. doi: 10.1016/j.ympev.2010.04.006. Epub 2010 Apr 14.

PMID:
20398778
[PubMed - indexed for MEDLINE]
15.

Molecular and morphological divergence in a pair of bird species and their ectoparasites.

Whiteman NK, Dosanjh VS, Palma RL, Hull JM, Kimball RT, Sánchez P, Sarasola JH, Parker PG.

J Parasitol. 2009 Dec;95(6):1372-82. doi: 10.1645/GE-2009.1.

PMID:
19655998
[PubMed - indexed for MEDLINE]
16.

A well-tested set of primers to amplify regions spread across the avian genome.

Kimball RT, Braun EL, Barker FK, Bowie RC, Braun MJ, Chojnowski JL, Hackett SJ, Han KL, Harshman J, Heimer-Torres V, Holznagel W, Huddleston CJ, Marks BD, Miglia KJ, Moore WS, Reddy S, Sheldon FH, Smith JV, Witt CC, Yuri T.

Mol Phylogenet Evol. 2009 Mar;50(3):654-60. doi: 10.1016/j.ympev.2008.11.018. Epub 2008 Dec 6. No abstract available.

PMID:
19084073
[PubMed - indexed for MEDLINE]
17.

Phylogenomic evidence for multiple losses of flight in ratite birds.

Harshman J, Braun EL, Braun MJ, Huddleston CJ, Bowie RC, Chojnowski JL, Hackett SJ, Han KL, Kimball RT, Marks BD, Miglia KJ, Moore WS, Reddy S, Sheldon FH, Steadman DW, Steppan SJ, Witt CC, Yuri T.

Proc Natl Acad Sci U S A. 2008 Sep 9;105(36):13462-7. doi: 10.1073/pnas.0803242105. Epub 2008 Sep 2.

PMID:
18765814
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

A phylogenomic study of birds reveals their evolutionary history.

Hackett SJ, Kimball RT, Reddy S, Bowie RC, Braun EL, Braun MJ, Chojnowski JL, Cox WA, Han KL, Harshman J, Huddleston CJ, Marks BD, Miglia KJ, Moore WS, Sheldon FH, Steadman DW, Witt CC, Yuri T.

Science. 2008 Jun 27;320(5884):1763-8. doi: 10.1126/science.1157704.

PMID:
18583609
[PubMed - indexed for MEDLINE]
Free Article
19.

Correlated evolution of fig size and color supports the dispersal syndromes hypothesis.

Lomáscolo SB, Speranza P, Kimball RT.

Oecologia. 2008 Jul;156(4):783-96. doi: 10.1007/s00442-008-1023-0. Epub 2008 Mar 27.

PMID:
18386067
[PubMed - indexed for MEDLINE]
20.

Introns outperform exons in analyses of basal avian phylogeny using clathrin heavy chain genes.

Chojnowski JL, Kimball RT, Braun EL.

Gene. 2008 Feb 29;410(1):89-96. doi: 10.1016/j.gene.2007.11.016. Epub 2007 Dec 7.

PMID:
18191344
[PubMed - indexed for MEDLINE]

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