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Results: 1 to 20 of 60

1.

IscR is essential for yersinia pseudotuberculosis type III secretion and virulence.

Miller HK, Kwuan L, Schwiesow L, Bernick DL, Mettert E, Ramirez HA, Ragle JM, Chan PP, Kiley PJ, Lowe TM, Auerbuch V.

PLoS Pathog. 2014 Jun 12;10(6):e1004194. doi: 10.1371/journal.ppat.1004194. eCollection 2014 Jun.

PMID:
24945271
[PubMed - in process]
Free PMC Article
2.

Correcting direct effects of ethanol on translation and transcription machinery confers ethanol tolerance in bacteria.

Haft RJ, Keating DH, Schwaegler T, Schwalbach MS, Vinokur J, Tremaine M, Peters JM, Kotlajich MV, Pohlmann EL, Ong IM, Grass JA, Kiley PJ, Landick R.

Proc Natl Acad Sci U S A. 2014 Jun 24;111(25):E2576-85. doi: 10.1073/pnas.1401853111. Epub 2014 Jun 9.

PMID:
24927582
[PubMed - in process]
Free PMC Article
3.

The bacterial response regulator ArcA uses a diverse binding site architecture to regulate carbon oxidation globally.

Park DM, Akhtar MS, Ansari AZ, Landick R, Kiley PJ.

PLoS Genet. 2013;9(10):e1003839. doi: 10.1371/journal.pgen.1003839. Epub 2013 Oct 17.

PMID:
24146625
[PubMed - indexed for MEDLINE]
Free PMC Article
4.

Transcriptome changes associated with anaerobic growth in Yersinia intermedia (ATCC29909).

Babujee L, Balakrishnan V, Kiley PJ, Glasner JD, Perna NT.

PLoS One. 2013 Oct 7;8(10):e76567. doi: 10.1371/journal.pone.0076567. eCollection 2013.

PMID:
24116118
[PubMed - in process]
Free PMC Article
5.

Genome-scale analysis of escherichia coli FNR reveals complex features of transcription factor binding.

Myers KS, Yan H, Ong IM, Chung D, Liang K, Tran F, Keleş S, Landick R, Kiley PJ.

PLoS Genet. 2013 Jun;9(6):e1003565. doi: 10.1371/journal.pgen.1003565. Epub 2013 Jun 20.

PMID:
23818864
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

Studies of IscR reveal a unique mechanism for metal-dependent regulation of DNA binding specificity.

Rajagopalan S, Teter SJ, Zwart PH, Brennan RG, Phillips KJ, Kiley PJ.

Nat Struct Mol Biol. 2013 Jun;20(6):740-7. doi: 10.1038/nsmb.2568. Epub 2013 May 5.

PMID:
23644595
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

Regulation of iron-sulphur cluster homeostasis through transcriptional control of the Isc pathway by [2Fe-2S]-IscR in Escherichia coli.

Giel JL, Nesbit AD, Mettert EL, Fleischhacker AS, Wanta BT, Kiley PJ.

Mol Microbiol. 2013 Feb;87(3):478-92. doi: 10.1111/mmi.12052. Epub 2012 Oct 17.

PMID:
23075318
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

ArcA and AppY antagonize IscR repression of hydrogenase-1 expression under anaerobic conditions, revealing a novel mode of O2 regulation of gene expression in Escherichia coli.

Nesbit AD, Fleischhacker AS, Teter SJ, Kiley PJ.

J Bacteriol. 2012 Dec;194(24):6892-9. doi: 10.1128/JB.01757-12. Epub 2012 Oct 12.

PMID:
23065979
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

Characterization of the [2Fe-2S] cluster of Escherichia coli transcription factor IscR.

Fleischhacker AS, Stubna A, Hsueh KL, Guo Y, Teter SJ, Rose JC, Brunold TC, Markley JL, Münck E, Kiley PJ.

Biochemistry. 2012 Jun 5;51(22):4453-62. Epub 2012 May 24.

PMID:
22583201
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

Evolution of the metabolic and regulatory networks associated with oxygen availability in two phytopathogenic enterobacteria.

Babujee L, Apodaca J, Balakrishnan V, Liss P, Kiley PJ, Charkowski AO, Glasner JD, Perna NT.

BMC Genomics. 2012 Mar 22;13:110. doi: 10.1186/1471-2164-13-110.

PMID:
22439737
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

Complex physiology and compound stress responses during fermentation of alkali-pretreated corn stover hydrolysate by an Escherichia coli ethanologen.

Schwalbach MS, Keating DH, Tremaine M, Marner WD, Zhang Y, Bothfeld W, Higbee A, Grass JA, Cotten C, Reed JL, da Costa Sousa L, Jin M, Balan V, Ellinger J, Dale B, Kiley PJ, Landick R.

Appl Environ Microbiol. 2012 May;78(9):3442-57. doi: 10.1128/AEM.07329-11. Epub 2012 Mar 2.

PMID:
22389370
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

A shared mechanism of SoxR activation by redox-cycling compounds.

Dietrich LE, Kiley PJ.

Mol Microbiol. 2011 Mar;79(5):1119-22. doi: 10.1111/j.1365-2958.2011.07552.x. Epub 2011 Jan 31.

PMID:
21338412
[PubMed - indexed for MEDLINE]
13.

Iron-containing transcription factors and their roles as sensors.

Fleischhacker AS, Kiley PJ.

Curr Opin Chem Biol. 2011 Apr;15(2):335-41. doi: 10.1016/j.cbpa.2011.01.006. Epub 2011 Feb 1. Review.

PMID:
21292540
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

Reconstruction of the core and extended regulons of global transcription factors.

Dufour YS, Kiley PJ, Donohue TJ.

PLoS Genet. 2010 Jul 22;6(7):e1001027. doi: 10.1371/journal.pgen.1001027.

PMID:
20661434
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

Investigating the effect of pH on the aggregation of two surfactant-like octapeptides.

Capes JS, Kiley PJ, Windle AH.

Langmuir. 2010 Apr 20;26(8):5637-44. doi: 10.1021/la904528p.

PMID:
20334410
[PubMed - indexed for MEDLINE]
16.

Techniques to isolate O2-sensitive proteins: [4Fe-4S]-FNR as an example.

Yan A, Kiley PJ.

Methods Enzymol. 2009;463:787-805. doi: 10.1016/S0076-6879(09)63042-1. Review.

PMID:
19892202
[PubMed - indexed for MEDLINE]
17.

Global approaches for finding small RNA and small open reading frame functions.

Wassarman KM, Kiley PJ.

J Bacteriol. 2010 Jan;192(1):26-8. doi: 10.1128/JB.01316-09. Epub . No abstract available.

PMID:
19854892
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

Sequence-specific binding to a subset of IscR-regulated promoters does not require IscR Fe-S cluster ligation.

Nesbit AD, Giel JL, Rose JC, Kiley PJ.

J Mol Biol. 2009 Mar 20;387(1):28-41. doi: 10.1016/j.jmb.2009.01.055. Epub 2009 Jan 31.

PMID:
19361432
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

The impact of O(2) on the Fe-S cluster biogenesis requirements of Escherichia coli FNR.

Mettert EL, Outten FW, Wanta B, Kiley PJ.

J Mol Biol. 2008 Dec 26;384(4):798-811. doi: 10.1016/j.jmb.2008.09.080. Epub 2008 Oct 10.

PMID:
18938178
[PubMed - indexed for MEDLINE]
Free PMC Article
20.

Dissecting the role of the N-terminal region of the Escherichia coli global transcription factor FNR.

Yan A, Kiley PJ.

J Bacteriol. 2008 Dec;190(24):8230-3. doi: 10.1128/JB.01242-08. Epub 2008 Oct 17.

PMID:
18931113
[PubMed - indexed for MEDLINE]
Free PMC Article

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