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Items: 11

1.

H3ABioNet, a sustainable pan-African bioinformatics network for human heredity and health in Africa.

Mulder NJ, Adebiyi E, Alami R, Benkahla A, Brandful J, Doumbia S, Everett D, Fadlelmola FM, Gaboun F, Gaseitsiwe S, Ghazal H, Hazelhurst S, Hide W, Ibrahimi A, Jaufeerally Fakim Y, Jongeneel CV, Joubert F, Kassim S, Kayondo J, Kumuthini J, Lyantagaye S, Makani J, Mansour Alzohairy A, Masiga D, Moussa A, Nash O, Ouwe Missi Oukem-Boyer O, Owusu-Dabo E, Panji S, Patterton H, Radouani F, Sadki K, Seghrouchni F, Tastan Bishop Ö, Tiffin N, Ulenga N; H3ABioNet Consortium, Adebiyi M, Ahmed AE, Ahmed RI, Alearts M, Alibi M, Aron S, Baichoo S, Bendou H, Botha G, Brown D, Chimusa E, Christoffels A, Cornick J, Entfellner JB, Fields C, Fischer A, Gamieldien J, Ghedira K, Ghouila A, Ho Sui S, Isewon I, Isokpehi R, Dashti MJ, Kamng'ona A, Khetani RS, Kiran A, Kulohoma B, Kumwenda B, Lapine D, Mainzer LS, Maslamoney S, Mbiyavanga M, Meintjes A, Mlyango FE, Mmbando B, Mohammed SA, Mpangase P, Msefula C, Mtatiro SN, Mugutso D, Mungloo-Dilmohammud Z, Musicha P, Nembaware V, Osamor VC, Oyelade J, Rendon G, Salazar GA, Salifu SP, Sangeda R, Souiai O, Van Heusden P, Wele M.

Genome Res. 2016 Feb;26(2):271-7. doi: 10.1101/gr.196295.115. Epub 2015 Dec 1.

2.

Glyphosate's impact on vegetative growth in leafy spurge identifies molecular processes and hormone cross-talk associated with increased branching.

Doğramacı M, Foley ME, Horvath DP, Hernandez AG, Khetani RS, Fields CJ, Keating KM, Mikel MA, Anderson JV.

BMC Genomics. 2015 May 19;16:395. doi: 10.1186/s12864-015-1627-9.

3.

MOV10 and FMRP regulate AGO2 association with microRNA recognition elements.

Kenny PJ, Zhou H, Kim M, Skariah G, Khetani RS, Drnevich J, Arcila ML, Kosik KS, Ceman S.

Cell Rep. 2014 Dec 11;9(5):1729-41. doi: 10.1016/j.celrep.2014.10.054. Epub 2014 Nov 20.

4.

Finding the missing honey bee genes: lessons learned from a genome upgrade.

Elsik CG, Worley KC, Bennett AK, Beye M, Camara F, Childers CP, de Graaf DC, Debyser G, Deng J, Devreese B, Elhaik E, Evans JD, Foster LJ, Graur D, Guigo R; HGSC production teams, Hoff KJ, Holder ME, Hudson ME, Hunt GJ, Jiang H, Joshi V, Khetani RS, Kosarev P, Kovar CL, Ma J, Maleszka R, Moritz RF, Munoz-Torres MC, Murphy TD, Muzny DM, Newsham IF, Reese JT, Robertson HM, Robinson GE, Rueppell O, Solovyev V, Stanke M, Stolle E, Tsuruda JM, Vaerenbergh MV, Waterhouse RM, Weaver DB, Whitfield CW, Wu Y, Zdobnov EM, Zhang L, Zhu D, Gibbs RA; Honey Bee Genome Sequencing Consortium.

BMC Genomics. 2014 Jan 30;15:86. doi: 10.1186/1471-2164-15-86.

5.

Intronic non-CG DNA hydroxymethylation and alternative mRNA splicing in honey bees.

Cingolani P, Cao X, Khetani RS, Chen CC, Coon M, Sammak A, Bollig-Fischer A, Land S, Huang Y, Hudson ME, Garfinkel MD, Zhong S, Robinson GE, Ruden DM.

BMC Genomics. 2013 Sep 30;14:666. doi: 10.1186/1471-2164-14-666.

6.

BeeSpace Navigator: exploratory analysis of gene function using semantic indexing of biological literature.

Sen Sarma M, Arcoleo D, Khetani RS, Chee B, Ling X, He X, Jiang J, Mei Q, Zhai C, Schatz B.

Nucleic Acids Res. 2011 Jul;39(Web Server issue):W462-9. doi: 10.1093/nar/gkr285. Epub 2011 May 9.

7.

Corona is required for higher-order assembly of transverse filaments into full-length synaptonemal complex in Drosophila oocytes.

Page SL, Khetani RS, Lake CM, Nielsen RJ, Jeffress JK, Warren WD, Bickel SE, Hawley RS.

PLoS Genet. 2008 Sep 19;4(9):e1000194. doi: 10.1371/journal.pgen.1000194.

8.

Regulation of meiotic cohesion and chromosome core morphogenesis during pachytene in Drosophila oocytes.

Khetani RS, Bickel SE.

J Cell Sci. 2007 Sep 1;120(Pt 17):3123-37. Epub 2007 Aug 14.

9.

A novel ensemble learning method for de novo computational identification of DNA binding sites.

Chakravarty A, Carlson JM, Khetani RS, Gross RH.

BMC Bioinformatics. 2007 Jul 12;8:249.

10.

SPACER: identification of cis-regulatory elements with non-contiguous critical residues.

Chakravarty A, Carlson JM, Khetani RS, DeZiel CE, Gross RH.

Bioinformatics. 2007 Apr 15;23(8):1029-31.

11.

Bounded search for de novo identification of degenerate cis-regulatory elements.

Carlson JM, Chakravarty A, Khetani RS, Gross RH.

BMC Bioinformatics. 2006 May 15;7:254.

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