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Items: 20

1.

Accelerated active case detection of visceral leishmaniasis patients in endemic villages of Bangladesh.

Khatun J, Huda MM, Hossain MS, Presber W, Ghosh D, Kroeger A, Matlashewski G, Mondal D.

PLoS One. 2014 Aug 4;9(8):e103678. doi: 10.1371/journal.pone.0103678. eCollection 2014.

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Whole human genome proteogenomic mapping for ENCODE cell line data: identifying protein-coding regions.

Khatun J, Yu Y, Wrobel JA, Risk BA, Gunawardena HP, Secrest A, Spitzer WJ, Xie L, Wang L, Chen X, Giddings MC.

BMC Genomics. 2013 Feb 28;14:141. doi: 10.1186/1471-2164-14-141.

4.

GOFAST: an integrated approach for efficient and comprehensive membrane proteome analysis.

Yu Y, Xie L, Gunawardena HP, Khatun J, Maier C, Spitzer W, Leerkes M, Giddings MC, Chen X.

Anal Chem. 2012 Nov 6;84(21):9008-14. doi: 10.1021/ac300134e. Epub 2012 Oct 25.

PMID:
23030679
5.

Long noncoding RNAs are rarely translated in two human cell lines.

Bánfai B, Jia H, Khatun J, Wood E, Risk B, Gundling WE Jr, Kundaje A, Gunawardena HP, Yu Y, Xie L, Krajewski K, Strahl BD, Chen X, Bickel P, Giddings MC, Brown JB, Lipovich L.

Genome Res. 2012 Sep;22(9):1646-57. doi: 10.1101/gr.134767.111.

6.

Landscape of transcription in human cells.

Djebali S, Davis CA, Merkel A, Dobin A, Lassmann T, Mortazavi A, Tanzer A, Lagarde J, Lin W, Schlesinger F, Xue C, Marinov GK, Khatun J, Williams BA, Zaleski C, Rozowsky J, Röder M, Kokocinski F, Abdelhamid RF, Alioto T, Antoshechkin I, Baer MT, Bar NS, Batut P, Bell K, Bell I, Chakrabortty S, Chen X, Chrast J, Curado J, Derrien T, Drenkow J, Dumais E, Dumais J, Duttagupta R, Falconnet E, Fastuca M, Fejes-Toth K, Ferreira P, Foissac S, Fullwood MJ, Gao H, Gonzalez D, Gordon A, Gunawardena H, Howald C, Jha S, Johnson R, Kapranov P, King B, Kingswood C, Luo OJ, Park E, Persaud K, Preall JB, Ribeca P, Risk B, Robyr D, Sammeth M, Schaffer L, See LH, Shahab A, Skancke J, Suzuki AM, Takahashi H, Tilgner H, Trout D, Walters N, Wang H, Wrobel J, Yu Y, Ruan X, Hayashizaki Y, Harrow J, Gerstein M, Hubbard T, Reymond A, Antonarakis SE, Hannon G, Giddings MC, Ruan Y, Wold B, Carninci P, Guigó R, Gingeras TR.

Nature. 2012 Sep 6;489(7414):101-8. doi: 10.1038/nature11233.

7.

The development of ciprofloxacin resistance in Pseudomonas aeruginosa involves multiple response stages and multiple proteins.

Su HC, Ramkissoon K, Doolittle J, Clark M, Khatun J, Secrest A, Wolfgang MC, Giddings MC.

Antimicrob Agents Chemother. 2010 Nov;54(11):4626-35. doi: 10.1128/AAC.00762-10. Epub 2010 Aug 9.

8.

Incorporating sequence information into the scoring function: a hidden Markov model for improved peptide identification.

Khatun J, Hamlett E, Giddings MC.

Bioinformatics. 2008 Mar 1;24(5):674-81. doi: 10.1093/bioinformatics/btn011. Epub 2008 Jan 10.

9.

Fragmentation characteristics of collision-induced dissociation in MALDI TOF/TOF mass spectrometry.

Khatun J, Ramkissoon K, Giddings MC.

Anal Chem. 2007 Apr 15;79(8):3032-40. Epub 2007 Mar 17.

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Effectiveness of depot-holders introduced in urban areas: evidence from a pilot in Bangladesh.

Gazi R, Mercer A, Khatun J, Islam Z.

J Health Popul Nutr. 2005 Dec;23(4):377-87.

PMID:
16599109
12.

Retention, perceived usefulness, and use of family health card in the Bangladesh Health and Population Sector Programme.

Gazi R, Khatun J, Ashraf A.

Health Care Manag (Frederick). 2004 Oct-Dec;23(4):341-52.

PMID:
15638342
13.

Can contact potentials reliably predict stability of proteins?

Khatun J, Khare SD, Dokholyan NV.

J Mol Biol. 2004 Mar 5;336(5):1223-38.

PMID:
15037081
14.

Impact of national immunization days on polio-related knowledge and practice of urban women in Bangladesh.

Quaiyum MA, Tuñon C, Hel Baqui A, Quayyum Z, Khatun J.

Health Policy Plan. 1997 Dec;12(4):363-71.

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Non-Franck-Condon vibrational distribution in the (1+1')-photon resonance-enhanced multiphoton ionization of H2.

Khatun J, Sanyal S, Rai Dastidar K.

Phys Rev A. 1994 Jun;49(6):4765-4769. No abstract available.

PMID:
9910797
18.

A new EPI strategy to reach high risk urban children in Bangladesh: urban volunteers.

Hughart N, Silimperi DR, Khatun J, Stanton B.

Trop Geogr Med. 1992 Jan;44(1-2):142-8.

PMID:
1496707
19.

Parasitic, bacterial and viral pathogens isolated from diarrhoeal and routine stool specimens of urban Bangladeshi children.

Stanton B, Silimperi DR, Khatun K, Kay B, Ahmed S, Khatun J, Alam K.

J Trop Med Hyg. 1989 Feb;92(1):46-55.

PMID:
2537431
20.

Comparability of results obtained by two-week home maintained diarrhoeal calendar with two-week diarrhoeal recall.

Stanton B, Clemens J, Aziz KM, Khatun K, Ahmed S, Khatun J.

Int J Epidemiol. 1987 Dec;16(4):595-601.

PMID:
3440671
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