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Results: 1 to 20 of 54

1.

PID-1 is a novel factor that operates during 21U-RNA biogenesis in Caenorhabditis elegans.

de Albuquerque BF, Luteijn MJ, Cordeiro Rodrigues RJ, van Bergeijk P, Waaijers S, Kaaij LJ, Klein H, Boxem M, Ketting RF.

Genes Dev. 2014 Apr 1;28(7):683-8. doi: 10.1101/gad.238220.114.

PMID:
24696453
[PubMed - indexed for MEDLINE]
Free PMC Article
2.

MUT-14 and SMUT-1 DEAD box RNA helicases have overlapping roles in germline RNAi and endogenous siRNA formation.

Phillips CM, Montgomery BE, Breen PC, Roovers EF, Rim YS, Ohsumi TK, Newman MA, van Wolfswinkel JC, Ketting RF, Ruvkun G, Montgomery TA.

Curr Biol. 2014 Apr 14;24(8):839-44. doi: 10.1016/j.cub.2014.02.060. Epub 2014 Mar 27.

PMID:
24684932
[PubMed - in process]
3.

Profiling of RNA modifications by multiplexed stable isotope labelling.

Kellner S, Neumann J, Rosenkranz D, Lebedeva S, Ketting RF, Zischler H, Schneider D, Helm M.

Chem Commun (Camb). 2014 Apr 4;50(26):3516-8. doi: 10.1039/c3cc49114e. Epub 2014 Feb 24.

PMID:
24567952
[PubMed - in process]
4.

Is this mine? small RNAs help to decide.

de Albuquerque BF, Ketting RF.

Dev Cell. 2013 Dec 23;27(6):599-601. doi: 10.1016/j.devcel.2013.12.005.

PMID:
24369831
[PubMed - indexed for MEDLINE]
5.

Isolation of zebrafish gonads for RNA isolation.

Huang HY, Ketting RF.

Methods Mol Biol. 2014;1093:183-94. doi: 10.1007/978-1-62703-694-8_15.

PMID:
24178566
[PubMed - indexed for MEDLINE]
6.

PIWI-interacting RNAs: from generation to transgenerational epigenetics.

Luteijn MJ, Ketting RF.

Nat Rev Genet. 2013 Aug;14(8):523-34. doi: 10.1038/nrg3495. Epub 2013 Jun 25. Review.

PMID:
23797853
[PubMed - indexed for MEDLINE]
7.

DNA methylation dynamics during intestinal stem cell differentiation reveals enhancers driving gene expression in the villus.

Kaaij LT, van de Wetering M, Fang F, Decato B, Molaro A, van de Werken HJ, van Es JH, Schuijers J, de Wit E, de Laat W, Hannon GJ, Clevers HC, Smith AD, Ketting RF.

Genome Biol. 2013 May 28;14(5):R50. [Epub ahead of print]

PMID:
23714178
[PubMed - as supplied by publisher]
Free PMC Article
8.

Mutations in LRRC50 predispose zebrafish and humans to seminomas.

Basten SG, Davis EE, Gillis AJ, van Rooijen E, Stoop H, Babala N, Logister I, Heath ZG, Jonges TN, Katsanis N, Voest EE, van Eeden FJ, Medema RH, Ketting RF, Schulte-Merker S, Looijenga LH, Giles RH.

PLoS Genet. 2013 Apr;9(4):e1003384. doi: 10.1371/journal.pgen.1003384. Epub 2013 Apr 11.

PMID:
23599692
[PubMed - in process]
Free PMC Article
9.

piRNA dynamics in divergent zebrafish strains reveal long-lasting maternal influence on zygotic piRNA profiles.

Kaaij LJ, Hoogstrate SW, Berezikov E, Ketting RF.

RNA. 2013 Mar;19(3):345-56. doi: 10.1261/rna.036400.112. Epub 2013 Jan 18.

PMID:
23335638
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

Extremely stable Piwi-induced gene silencing in Caenorhabditis elegans.

Luteijn MJ, van Bergeijk P, Kaaij LJ, Almeida MV, Roovers EF, Berezikov E, Ketting RF.

EMBO J. 2012 Aug 15;31(16):3422-30. doi: 10.1038/emboj.2012.213. Epub 2012 Jul 31.

PMID:
22850670
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

Differential impact of the HEN1 homolog HENN-1 on 21U and 26G RNAs in the germline of Caenorhabditis elegans.

Kamminga LM, van Wolfswinkel JC, Luteijn MJ, Kaaij LJ, Bagijn MP, Sapetschnig A, Miska EA, Berezikov E, Ketting RF.

PLoS Genet. 2012;8(7):e1002702. doi: 10.1371/journal.pgen.1002702. Epub 2012 Jul 19.

PMID:
22829772
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

microRNA Biogenesis and Function : An overview.

Ketting RF.

Adv Exp Med Biol. 2011;700:1-14. doi: 10.1007/978-1-4419-7823-3_1.

PMID:
21755468
[PubMed - in process]
13.

Tdrd1 acts as a molecular scaffold for Piwi proteins and piRNA targets in zebrafish.

Huang HY, Houwing S, Kaaij LJ, Meppelink A, Redl S, Gauci S, Vos H, Draper BW, Moens CB, Burgering BM, Ladurner P, Krijgsveld J, Berezikov E, Ketting RF.

EMBO J. 2011 Jul 8;30(16):3298-308. doi: 10.1038/emboj.2011.228.

PMID:
21743441
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

RNAi genes pave their own way.

Kamminga LM, Ketting RF.

Genes Dev. 2011 Mar 15;25(6):529-33. doi: 10.1101/gad.2038611.

PMID:
21406552
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

The many faces of RNAi.

Ketting RF.

Dev Cell. 2011 Feb 15;20(2):148-61. doi: 10.1016/j.devcel.2011.01.012. Review.

PMID:
21316584
[PubMed - indexed for MEDLINE]
Free Article
16.

Hen1 is required for oocyte development and piRNA stability in zebrafish.

Kamminga LM, Luteijn MJ, den Broeder MJ, Redl S, Kaaij LJ, Roovers EF, Ladurner P, Berezikov E, Ketting RF.

EMBO J. 2010 Nov 3;29(21):3688-700. doi: 10.1038/emboj.2010.233. Epub 2010 Sep 21. Erratum in: EMBO J. 2012 Jan 4;31(1):248.

PMID:
20859253
[PubMed - indexed for MEDLINE]
Free PMC Article
17.

The role of small non-coding RNAs in genome stability and chromatin organization.

van Wolfswinkel JC, Ketting RF.

J Cell Sci. 2010 Jun 1;123(Pt 11):1825-39. doi: 10.1242/jcs.061713. Review.

PMID:
20484663
[PubMed - indexed for MEDLINE]
Free Article
18.

MicroRNA-directed siRNA biogenesis in Caenorhabditis elegans.

CorrĂȘa RL, Steiner FA, Berezikov E, Ketting RF.

PLoS Genet. 2010 Apr 8;6(4):e1000903. doi: 10.1371/journal.pgen.1000903.

PMID:
20386745
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

Dcr1 tracked down.

Kaaij LJ, Ketting RF.

Dev Cell. 2010 Jan 19;18(1):6-7. doi: 10.1016/j.devcel.2010.01.001.

PMID:
20152173
[PubMed - indexed for MEDLINE]
Free Article
20.

MicroRNA biogenesis and function. An overview.

Ketting RF.

Adv Exp Med Biol. 2010;700:1-14. Review.

PMID:
21627025
[PubMed - indexed for MEDLINE]

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