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Results: 1 to 20 of 23

1.

Single-cell gene expression signatures reveal melanoma cell heterogeneity.

Ennen M, Keime C, Kobi D, Mengus G, Lipsker D, Thibault-Carpentier C, Davidson I.

Oncogene. 2014 Aug 18;0. doi: 10.1038/onc.2014.262. [Epub ahead of print]

PMID:
25132268
[PubMed - as supplied by publisher]
2.

Phosphorylation of the retinoic acid receptor RARγ2 is crucial for the neuronal differentiation of mouse embryonic stem cells.

Al Tanoury Z, Gaouar S, Piskunov A, Ye T, Urban S, Jost B, Keime C, Davidson I, Dierich A, Rochette-Egly C.

J Cell Sci. 2014 May 1;127(Pt 9):2095-105. doi: 10.1242/jcs.145979. Epub 2014 Feb 25.

PMID:
24569880
[PubMed - in process]
3.

Genes involved in cell adhesion and signaling: a new repertoire of retinoic acid receptor target genes in mouse embryonic fibroblasts.

Al Tanoury Z, Piskunov A, Andriamoratsiresy D, Gaouar S, Lutzing R, Ye T, Jost B, Keime C, Rochette-Egly C.

J Cell Sci. 2014 Feb 1;127(Pt 3):521-33. doi: 10.1242/jcs.131946. Epub 2013 Dec 19.

PMID:
24357724
[PubMed - indexed for MEDLINE]
Free Article
4.

Genetic analysis of the biosynthesis of 2-methoxy-3-isobutylpyrazine, a major grape-derived aroma compound impacting wine quality.

Guillaumie S, Ilg A, Réty S, Brette M, Trossat-Magnin C, Decroocq S, Léon C, Keime C, Ye T, Baltenweck-Guyot R, Claudel P, Bordenave L, Vanbrabant S, Duchêne E, Delrot S, Darriet P, Hugueney P, Gomès E.

Plant Physiol. 2013 Jun;162(2):604-15. doi: 10.1104/pp.113.218313. Epub 2013 Apr 19.

PMID:
23606597
[PubMed - indexed for MEDLINE]
Free PMC Article
5.

Trim24-repressed VL30 retrotransposons regulate gene expression by producing noncoding RNA.

Herquel B, Ouararhni K, Martianov I, Le Gras S, Ye T, Keime C, Lerouge T, Jost B, Cammas F, Losson R, Davidson I.

Nat Struct Mol Biol. 2013 Mar;20(3):339-46. doi: 10.1038/nsmb.2496. Epub 2013 Feb 3.

PMID:
23377542
[PubMed - indexed for MEDLINE]
6.

A comprehensive evaluation of normalization methods for Illumina high-throughput RNA sequencing data analysis.

Dillies MA, Rau A, Aubert J, Hennequet-Antier C, Jeanmougin M, Servant N, Keime C, Marot G, Castel D, Estelle J, Guernec G, Jagla B, Jouneau L, Laloë D, Le Gall C, Schaëffer B, Le Crom S, Guedj M, Jaffrézic F; French StatOmique Consortium.

Brief Bioinform. 2013 Nov;14(6):671-83. doi: 10.1093/bib/bbs046. Epub 2012 Sep 17.

PMID:
22988256
[PubMed - indexed for MEDLINE]
7.

Selective upregulation of lipid metabolism in skeletal muscle of foraging juvenile king penguins: an integrative study.

Teulier L, Dégletagne C, Rey B, Tornos J, Keime C, de Dinechin M, Raccurt M, Rouanet JL, Roussel D, Duchamp C.

Proc Biol Sci. 2012 Jun 22;279(1737):2464-72. doi: 10.1098/rspb.2011.2664. Epub 2012 Feb 22.

PMID:
22357259
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

Genomic binding of Pol III transcription machinery and relationship with TFIIS transcription factor distribution in mouse embryonic stem cells.

Carrière L, Graziani S, Alibert O, Ghavi-Helm Y, Boussouar F, Humbertclaude H, Jounier S, Aude JC, Keime C, Murvai J, Foglio M, Gut M, Gut I, Lathrop M, Soutourina J, Gérard M, Werner M.

Nucleic Acids Res. 2012 Jan;40(1):270-83. doi: 10.1093/nar/gkr737. Epub 2011 Sep 12.

PMID:
21911356
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

Transcription factor TEAD4 regulates expression of myogenin and the unfolded protein response genes during C2C12 cell differentiation.

Benhaddou A, Keime C, Ye T, Morlon A, Michel I, Jost B, Mengus G, Davidson I.

Cell Death Differ. 2012 Feb;19(2):220-31. doi: 10.1038/cdd.2011.87. Epub 2011 Jun 24.

PMID:
21701496
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

Essential role of microphthalmia transcription factor for DNA replication, mitosis and genomic stability in melanoma.

Strub T, Giuliano S, Ye T, Bonet C, Keime C, Kobi D, Le Gras S, Cormont M, Ballotti R, Bertolotto C, Davidson I.

Oncogene. 2011 May 19;30(20):2319-32. doi: 10.1038/onc.2010.612. Epub 2011 Jan 24.

PMID:
21258399
[PubMed - indexed for MEDLINE]
11.

seqMINER: an integrated ChIP-seq data interpretation platform.

Ye T, Krebs AR, Choukrallah MA, Keime C, Plewniak F, Davidson I, Tora L.

Nucleic Acids Res. 2011 Mar;39(6):e35. doi: 10.1093/nar/gkq1287. Epub 2010 Dec 21.

PMID:
21177645
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

Novel genes differentially expressed between posterior and median silk gland identified by SAGE-aided transcriptome analysis.

Royer C, Briolay J, Garel A, Brouilly P, Sasanuma S, Sasanuma M, Shimomura M, Keime C, Gandrillon O, Huang Y, Chavancy G, Mita K, Couble P.

Insect Biochem Mol Biol. 2011 Feb;41(2):118-24. doi: 10.1016/j.ibmb.2010.11.003. Epub 2010 Nov 13.

PMID:
21078388
[PubMed - indexed for MEDLINE]
13.

Sensitivity and gene expression profile of fresh human acute myeloid leukemia cells exposed ex vivo to AS602868.

Jordheim LP, Plesa A, Dreano M, Cros-Perrial E, Keime C, Herveau S, Demangel D, Vendrell JA, Dumontet C.

Cancer Chemother Pharmacol. 2011 Jul;68(1):97-105. doi: 10.1007/s00280-010-1458-y. Epub 2010 Sep 16.

PMID:
20844879
[PubMed - indexed for MEDLINE]
14.

Transcriptome analysis in non-model species: a new method for the analysis of heterologous hybridization on microarrays.

Degletagne C, Keime C, Rey B, de Dinechin M, Forcheron F, Chuchana P, Jouventin P, Gautier C, Duchamp C.

BMC Genomics. 2010 May 31;11:344. doi: 10.1186/1471-2164-11-344.

PMID:
20509979
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

mTOR inhibition reverses acquired endocrine therapy resistance of breast cancer cells at the cell proliferation and gene-expression levels.

Ghayad SE, Bieche I, Vendrell JA, Keime C, Lidereau R, Dumontet C, Cohen PA.

Cancer Sci. 2008 Oct;99(10):1992-2003. doi: 10.1111/j.1349-7006.2008.00955.x.

PMID:
19016759
[PubMed - indexed for MEDLINE]
16.

SQUAT: A web tool to mine human, murine and avian SAGE data.

Leyritz J, Schicklin S, Blachon S, Keime C, Robardet C, Boulicaut JF, Besson J, Pensa RG, Gandrillon O.

BMC Bioinformatics. 2008 Sep 18;9:378. doi: 10.1186/1471-2105-9-378.

PMID:
18801154
[PubMed - indexed for MEDLINE]
Free PMC Article
17.

A combination of LongSAGE with Solexa sequencing is well suited to explore the depth and the complexity of transcriptome.

Hanriot L, Keime C, Gay N, Faure C, Dossat C, Wincker P, Scoté-Blachon C, Peyron C, Gandrillon O.

BMC Genomics. 2008 Sep 16;9:418. doi: 10.1186/1471-2164-9-418.

PMID:
18796152
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

Large-scale analysis by SAGE reveals new mechanisms of v-erbA oncogene action.

Bresson C, Keime C, Faure C, Letrillard Y, Barbado M, Sanfilippo S, Benhra N, Gandrillon O, Gonin-Giraud S.

BMC Genomics. 2007 Oct 26;8:390.

PMID:
17961265
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

Unexpected observations after mapping LongSAGE tags to the human genome.

Keime C, Sémon M, Mouchiroud D, Duret L, Gandrillon O.

BMC Bioinformatics. 2007 May 15;8:154.

PMID:
17504516
[PubMed - indexed for MEDLINE]
Free PMC Article
20.

SAGE analysis of mosquito salivary gland transcriptomes during Plasmodium invasion.

Rosinski-Chupin I, Briolay J, Brouilly P, Perrot S, Gomez SM, Chertemps T, Roth CW, Keime C, Gandrillon O, Couble P, Brey PT.

Cell Microbiol. 2007 Mar;9(3):708-24. Epub 2006 Oct 18.

PMID:
17054438
[PubMed - indexed for MEDLINE]

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