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Results: 1 to 20 of 84

1.

Using Whole Genome Analysis to Examine Recombination across Diverse Sequence Types of Staphylococcus aureus.

Driebe EM, Sahl JW, Roe C, Bowers JR, Schupp JM, Gillece JD, Kelley E, Price LB, Pearson TR, Hepp CM, Brzoska PM, Cummings CA, Furtado MR, Andersen PS, Stegger M, Engelthaler DM, Keim PS.

PLoS One. 2015 Jul 10;10(7):e0130955. doi: 10.1371/journal.pone.0130955. eCollection 2015.

2.

Community-integrated omics links dominance of a microbial generalist to fine-tuned resource usage.

Muller EE, Pinel N, Laczny CC, Hoopmann MR, Narayanasamy S, Lebrun LA, Roume H, Lin J, May P, Hicks ND, Heintz-Buschart A, Wampach L, Liu CM, Price LB, Gillece JD, Guignard C, Schupp JM, Vlassis N, Baliga NS, Moritz RL, Keim PS, Wilmes P.

Nat Commun. 2014 Nov 26;5:5603. doi: 10.1038/ncomms6603.

3.

Insights to genetic characterization tools for epidemiological tracking of Francisella tularensis in Sweden.

Wahab T, Birdsell DN, Hjertqvist M, Mitchell CL, Wagner DM, Keim PS, Hedenström I, Löfdahl S.

PLoS One. 2014 Nov 17;9(11):e112167. doi: 10.1371/journal.pone.0112167. eCollection 2014.

4.

Genomic epidemiology of the Haitian cholera outbreak: a single introduction followed by rapid, extensive, and continued spread characterized the onset of the epidemic.

Eppinger M, Pearson T, Koenig SS, Pearson O, Hicks N, Agrawal S, Sanjar F, Galens K, Daugherty S, Crabtree J, Hendriksen RS, Price LB, Upadhyay BP, Shakya G, Fraser CM, Ravel J, Keim PS.

MBio. 2014 Nov 4;5(6):e01721. doi: 10.1128/mBio.01721-14.

5.

Genotyping of Burkholderia mallei from an outbreak of glanders in Bahrain suggests multiple introduction events.

Scholz HC, Pearson T, Hornstra H, Projahn M, Terzioglu R, Wernery R, Georgi E, Riehm JM, Wagner DM, Keim PS, Joseph M, Johnson B, Kinne J, Jose S, Hepp CM, Witte A, Wernery U.

PLoS Negl Trop Dis. 2014 Sep 25;8(9):e3195. doi: 10.1371/journal.pntd.0003195. eCollection 2014 Sep.

6.

Yersinia pestis and the three plague pandemics--authors' reply.

Wagner DM, Keim PS, Scholz HC, Holmes EC, Poinar H.

Lancet Infect Dis. 2014 Oct;14(10):919. doi: 10.1016/S1473-3099(14)70923-5. No abstract available.

PMID:
25253401
7.

Transmission of methicillin-resistant Staphylococcus aureus infection through solid organ transplantation: confirmation via whole genome sequencing.

Wendt JM, Kaul D, Limbago BM, Ramesh M, Cohle S, Denison AM, Driebe EM, Rasheed JK, Zaki SR, Blau DM, Paddock CD, McDougal LK, Engelthaler DM, Keim PS, Roe CC, Akselrod H, Kuehnert MJ, Basavaraju SV.

Am J Transplant. 2014 Nov;14(11):2633-9. doi: 10.1111/ajt.12898. Epub 2014 Sep 22.

PMID:
25250717
8.

TaqMan real-time PCR assays for single-nucleotide polymorphisms which identify Francisella tularensis and its subspecies and subpopulations.

Birdsell DN, Vogler AJ, Buchhagen J, Clare A, Kaufman E, Naumann A, Driebe E, Wagner DM, Keim PS.

PLoS One. 2014 Sep 19;9(9):e107964. doi: 10.1371/journal.pone.0107964. eCollection 2014.

9.

Real-time PCR assays for genotyping of Cryptococcus gattii in North America.

Kelley EJ, Driebe EM, Etienne K, Brandt ME, Schupp JM, Gillece JD, Trujillo JS, Lockhart SR, Deak E, Keim PS, Engelthaler DM.

BMC Microbiol. 2014 May 13;14:125. doi: 10.1186/1471-2180-14-125.

10.

Genotyping of Coxiella burnetii from domestic ruminants and human in Hungary: indication of various genotypes.

Sulyok KM, Kreizinger Z, Hornstra HM, Pearson T, Szigeti A, Dán Á, Balla E, Keim PS, Gyuranecz M.

BMC Vet Res. 2014 May 7;10:107. doi: 10.1186/1746-6148-10-107.

11.

The 2010 cholera outbreak in Haiti: how science solved a controversy.

Orata FD, Keim PS, Boucher Y.

PLoS Pathog. 2014 Apr 3;10(4):e1003967. doi: 10.1371/journal.ppat.1003967. eCollection 2014 Apr. Review. No abstract available.

12.

Yersinia pestis and the plague of Justinian 541-543 AD: a genomic analysis.

Wagner DM, Klunk J, Harbeck M, Devault A, Waglechner N, Sahl JW, Enk J, Birdsell DN, Kuch M, Lumibao C, Poinar D, Pearson T, Fourment M, Golding B, Riehm JM, Earn DJ, Dewitte S, Rouillard JM, Grupe G, Wiechmann I, Bliska JB, Keim PS, Scholz HC, Holmes EC, Poinar H.

Lancet Infect Dis. 2014 Apr;14(4):319-26. doi: 10.1016/S1473-3099(13)70323-2. Epub 2014 Jan 28.

PMID:
24480148
13.

Injectional anthrax in heroin users, Europe, 2000-2012.

Hanczaruk M, Reischl U, Holzmann T, Frangoulidis D, Wagner DM, Keim PS, Antwerpen MH, Meyer H, Grass G.

Emerg Infect Dis. 2014 Feb;20(2):322-3. doi: 10.3201/eid2002.120921. No abstract available.

14.

Discovery of (R)-4-cyclopropyl-7,8-difluoro-5-(4-(trifluoromethyl)phenylsulfonyl)-4,5-dihydro-1H-pyrazolo[4,3-c]quinoline (ELND006) and (R)-4-cyclopropyl-8-fluoro-5-(6-(trifluoromethyl)pyridin-3-ylsulfonyl)-4,5-dihydro-2H-pyrazolo[4,3-c]quinoline (ELND007): metabolically stable γ-secretase Inhibitors that selectively inhibit the production of amyloid-β over Notch.

Probst G, Aubele DL, Bowers S, Dressen D, Garofalo AW, Hom RK, Konradi AW, Marugg JL, Mattson MN, Neitzel ML, Semko CM, Sham HL, Smith J, Sun M, Truong AP, Ye XM, Xu YZ, Dappen MS, Jagodzinski JJ, Keim PS, Peterson B, Latimer LH, Quincy D, Wu J, Goldbach E, Ness DK, Quinn KP, Sauer JM, Wong K, Zhang H, Zmolek W, Brigham EF, Kholodenko D, Hu K, Kwong GT, Lee M, Liao A, Motter RN, Sacayon P, Santiago P, Willits C, Bard F, Bova MP, Hemphill SS, Nguyen L, Ruslim L, Tanaka K, Tanaka P, Wallace W, Yednock TA, Basi GS.

J Med Chem. 2013 Jul 11;56(13):5261-74. doi: 10.1021/jm301741t. Epub 2013 Jun 20.

PMID:
23713656
15.

Within-host evolution of Brucella canis during a canine brucellosis outbreak in a kennel.

Gyuranecz M, Rannals BD, Allen CA, Jánosi S, Keim PS, Foster JT.

BMC Vet Res. 2013 Apr 12;9:76. doi: 10.1186/1746-6148-9-76.

16.

Feral swine brucellosis in the United States and prospective genomic techniques for disease epidemiology.

Leiser OP, Corn JL, Schmit BS, Keim PS, Foster JT.

Vet Microbiol. 2013 Sep 27;166(1-2):1-10. doi: 10.1016/j.vetmic.2013.02.025. Epub 2013 Mar 15. Review.

PMID:
23548760
17.

Genome sequence of "Candidatus Microthrix parvicella" Bio17-1, a long-chain-fatty-acid-accumulating filamentous actinobacterium from a biological wastewater treatment plant.

Muller EE, Pinel N, Gillece JD, Schupp JM, Price LB, Engelthaler DM, Levantesi C, Tandoi V, Luong K, Baliga NS, Korlach J, Keim PS, Wilmes P.

J Bacteriol. 2012 Dec;194(23):6670-1. doi: 10.1128/JB.01765-12.

18.

Integrating genome-based informatics to modernize global disease monitoring, information sharing, and response.

Aarestrup FM, Brown EW, Detter C, Gerner-Smidt P, Gilmour MW, Harmsen D, Hendriksen RS, Hewson R, Heymann DL, Johansson K, Ijaz K, Keim PS, Koopmans M, Kroneman A, Lo Fo Wong D, Lund O, Palm D, Sawanpanyalert P, Sobel J, Schlundt J.

Emerg Infect Dis. 2012 Nov;18(11):e1. doi: 10.3201/eid/1811.120453.

19.

An objective approach for Burkholderia pseudomallei strain selection as challenge material for medical countermeasures efficacy testing.

Van Zandt KE, Tuanyok A, Keim PS, Warren RL, Gelhaus HC.

Front Cell Infect Microbiol. 2012 Sep 26;2:120. doi: 10.3389/fcimb.2012.00120. eCollection 2012. Review.

20.

Source attribution of 2010 cholera epidemic in Haiti.

Frerichs RR, Boncy J, Barrais R, Keim PS, Piarroux R.

Proc Natl Acad Sci U S A. 2012 Nov 20;109(47):E3208; author reply E3209. doi: 10.1073/pnas.1211512109. Epub 2012 Oct 9. No abstract available.

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