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Items: 1 to 20 of 385

1.

Local Population Structure and Patterns of Western Hemisphere Dispersal for Coccidioides spp., the Fungal Cause of Valley Fever.

Engelthaler DM, Roe CC, Hepp CM, Teixeira M, Driebe EM, Schupp JM, Gade L, Waddell V, Komatsu K, Arathoon E, Logemann H, Thompson GR 3rd, Chiller T, Barker B, Keim P, Litvintseva AP.

MBio. 2016 Apr 26;7(2). pii: e00550-16. doi: 10.1128/mBio.00550-16.

PMID:
27118594
2.

Correction for Johnson et al., Complete Genome Sequences for 59 Burkholderia Isolates, Both Pathogenic and Near Neighbor.

Johnson SL, Bishop-Lilly KA, Ladner JT, Daligault HE, Davenport KW, Jaissle J, Frey KG, Koroleva GI, Bruce DC, Coyne SR, Broomall SM, Ketheesan N, Mayo M, Hoffmaster A, Elrod MG, Wuthiekanun V, Tuanyok A, Norton R, Currie BJ, Wagner DM, Keim P, Li PE, Teshima H, Gibbons HS, Palacios GF, Rosenzweig CN, Redden CL, Xu Y, Minogue TD, Chain PS.

Genome Announc. 2016 Apr 21;4(2). pii: e00313-16. doi: 10.1128/genomeA.00313-16. No abstract available.

3.

The Phylogeny of Bacillus cereus sensu lato.

Okinaka RT, Keim P.

Microbiol Spectr. 2016 Feb;4(1). doi: 10.1128/microbiolspec.TBS-0012-2012.

PMID:
26999390
4.

Hypervirulent emm59 Clone in Invasive Group A Streptococcus Outbreak, Southwestern United States.

Engelthaler DM, Valentine M, Bowers J, Pistole J, Driebe EM, Terriquez J, Nienstadt L, Carroll M, Schumacher M, Ormsby ME, Brady S, Livar E, Yazzie D, Waddell V, Peoples M, Komatsu K, Keim P.

Emerg Infect Dis. 2016 Apr;22(4):734-8. doi: 10.3201/eid2204.151582.

5.

Comparative genomic analyses reveal broad diversity in botulinum-toxin-producing Clostridia.

Williamson CH, Sahl JW, Smith TJ, Xie G, Foley BT, Smith LA, Fernández RA, Lindström M, Korkeala H, Keim P, Foster J, Hill K.

BMC Genomics. 2016 Mar 3;17(1):180. doi: 10.1186/s12864-016-2502-z.

6.

Effective Disinfectants for Coccidioides immitis and C. posadasii.

Vogler AJ, Nottingham R, Parise KL, Keim P, Barker BM.

Appl Biosaf. 2015;20(3):154-158.

7.

Whole Genome Analysis of Injectional Anthrax Identifies Two Disease Clusters Spanning More Than 13 Years.

Keim P, Grunow R, Vipond R, Grass G, Hoffmaster A, Birdsell DN, Klee SR, Pullan S, Antwerpen M, Bayer BN, Latham J, Wiggins K, Hepp C, Pearson T, Brooks T, Sahl J, Wagner DM.

EBioMedicine. 2015 Oct 6;2(11):1613-8. doi: 10.1016/j.ebiom.2015.10.004. eCollection 2015 Nov.

8.

Eighteenth century Yersinia pestis genomes reveal the long-term persistence of an historical plague focus.

Bos KI, Herbig A, Sahl J, Waglechner N, Fourment M, Forrest SA, Klunk J, Schuenemann VJ, Poinar D, Kuch M, Golding GB, Dutour O, Keim P, Wagner DM, Holmes EC, Krause J, Poinar HN.

Elife. 2016 Jan 21;5. pii: e12994. doi: 10.7554/eLife.12994.

9.

Grain-boundary-induced melting in quenched polycrystalline monolayers.

Deutschländer S, Boitard C, Maret G, Keim P.

Phys Rev E Stat Nonlin Soft Matter Phys. 2015 Dec;92(6-1):060302. Epub 2015 Dec 9.

PMID:
26764613
10.

Unprecedented Melioidosis Cases in Northern Australia Caused by an Asian Burkholderia pseudomallei Strain Identified by Using Large-Scale Comparative Genomics.

Price EP, Sarovich DS, Smith EJ, MacHunter B, Harrington G, Theobald V, Hall CM, Hornstra HM, McRobb E, Podin Y, Mayo M, Sahl JW, Wagner DM, Keim P, Kaestli M, Currie BJ.

Appl Environ Microbiol. 2015 Nov 25;82(3):954-63. doi: 10.1128/AEM.03013-15.

PMID:
26607593
11.

Diverse Burkholderia Species Isolated from Soils in the Southern United States with No Evidence of B. pseudomallei.

Hall CM, Busch JD, Shippy K, Allender CJ, Kaestli M, Mayo M, Sahl JW, Schupp JM, Colman RE, Keim P, Currie BJ, Wagner DM.

PLoS One. 2015 Nov 23;10(11):e0143254. doi: 10.1371/journal.pone.0143254. eCollection 2015.

12.

Investigation of Yersinia pestis Laboratory Adaptation through a Combined Genomics and Proteomics Approach.

Leiser OP, Merkley ED, Clowers BH, Deatherage Kaiser BL, Lin A, Hutchison JR, Melville AM, Wagner DM, Keim PS, Foster JT, Kreuzer HW.

PLoS One. 2015 Nov 24;10(11):e0142997. doi: 10.1371/journal.pone.0142997. eCollection 2015.

13.

High Prevalence of Intermediate Leptospira spp. DNA in Febrile Humans from Urban and Rural Ecuador.

Chiriboga J, Barragan V, Arroyo G, Sosa A, Birdsell DN, España K, Mora A, Espín E, Mejía ME, Morales M, Pinargote C, Gonzalez M, Hartskeerl R, Keim P, Bretas G, Eisenberg JN, Trueba G.

Emerg Infect Dis. 2015 Dec;21(12):2141-7. doi: 10.3201/eid2112.140659.

14.

Water as Source of Francisella tularensis Infection in Humans, Turkey.

Kilic S, Birdsell DN, Karagöz A, Çelebi B, Bakkaloglu Z, Arikan M, Sahl JW, Mitchell C, Rivera A, Maltinsky S, Keim P, Üstek D, Durmaz R, Wagner DM.

Emerg Infect Dis. 2015 Dec;21(12):2213-6. doi: 10.3201/eid2112.150634.

15.

Viability of Yersinia pestis subcultures in agar stabs.

Leal NC, Sobreira M, Araújo AF, Magalhães JL, Vogler AJ, Bollig MC, Nottingham R, Keim P, Wagner DM, Almeida AM.

Lett Appl Microbiol. 2016 Jan;62(1):91-5. doi: 10.1111/lam.12519.

PMID:
26524218
16.

A review of methods for subtyping Yersinia pestis: From phenotypes to whole genome sequencing.

Vogler AJ, Keim P, Wagner DM.

Infect Genet Evol. 2016 Jan;37:21-36. doi: 10.1016/j.meegid.2015.10.024. Epub 2015 Oct 27. Review.

17.

Pangenome Analysis of Burkholderia pseudomallei: Genome Evolution Preserves Gene Order despite High Recombination Rates.

Spring-Pearson SM, Stone JK, Doyle A, Allender CJ, Okinaka RT, Mayo M, Broomall SM, Hill JM, Karavis MA, Hubbard KS, Insalaco JM, McNew LA, Rosenzweig CN, Gibbons HS, Currie BJ, Wagner DM, Keim P, Tuanyok A.

PLoS One. 2015 Oct 20;10(10):e0140274. doi: 10.1371/journal.pone.0140274. eCollection 2015.

18.

Estimated herd prevalence and sequence types of Coxiella burnetii in bulk tank milk samples from commercial dairies in Indiana.

Bauer AE, Olivas S, Cooper M, Hornstra H, Keim P, Pearson T, Johnson AJ.

BMC Vet Res. 2015 Aug 7;11:186. doi: 10.1186/s12917-015-0517-3.

19.

Best practices for evaluating single nucleotide variant calling methods for microbial genomics.

Olson ND, Lund SP, Colman RE, Foster JT, Sahl JW, Schupp JM, Keim P, Morrow JB, Salit ML, Zook JM.

Front Genet. 2015 Jul 7;6:235. doi: 10.3389/fgene.2015.00235. eCollection 2015. Review.

20.

Mapping the Evolution of Hypervirulent Klebsiella pneumoniae.

Struve C, Roe CC, Stegger M, Stahlhut SG, Hansen DS, Engelthaler DM, Andersen PS, Driebe EM, Keim P, Krogfelt KA.

MBio. 2015 Jul 21;6(4):e00630. doi: 10.1128/mBio.00630-15.

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