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A survey of polymorphisms detected from sequences of popular beef breeds.

Snelling WM, Bennett GL, Keele JW, Kuehn LA, McDaneld TG, Smith TP, Thallman RM, Kalbfleisch TS, Pollak EJ.

J Anim Sci. 2015 Nov;93(11):5128-43. doi: 10.2527/jas.2015-9356.


Evaluation of single nucleotide polymorphisms in chromosomal regions impacting pregnancy status in cattle.

Psaros KM, McDaneld TG, Kuehn LA, Snelling WM, Keele JW.

J Anim Sci. 2015 Mar;93(3):978-87. doi: 10.2527/jas.2014-8509.


Genomewide association study of lung lesions in cattle using sample pooling.

Keele JW, Kuehn LA, McDaneld TG, Tait RG, Jones SA, Smith TP, Shackelford SD, King DA, Wheeler TL, Lindholm-Perry AK, McNeel AK.

J Anim Sci. 2015 Mar;93(3):956-64. doi: 10.2527/jas.2014-8492.


CAPN1, CAST, and DGAT1 genetic effects on preweaning performance, carcass quality traits, and residual variance of tenderness in a beef cattle population selected for haplotype and allele equalization.

Tait RG Jr, Shackelford SD, Wheeler TL, King DA, Keele JW, Casas E, Smith TP, Bennett GL.

J Anim Sci. 2014 Dec;92(12):5382-93. doi: 10.2527/jas.2014-8211.


A genome-wide association study for the incidence of persistent bovine viral diarrhea virus infection in cattle.

Casas E, Hessman BE, Keele JW, Ridpath JF.

Anim Genet. 2015 Feb;46(1):8-15. doi: 10.1111/age.12239. Epub 2014 Nov 13.


Genomewide association study of reproductive efficiency in female cattle.

McDaneld TG, Kuehn LA, Thomas MG, Snelling WM, Smith TP, Pollak EJ, Cole JB, Keele JW.

J Anim Sci. 2014 May;92(5):1945-57. doi: 10.2527/jas.2012-6807.


Identifying genetic loci controlling neonatal passive transfer of immunity using a hybrid genotyping strategy.

Rohrer GA, Rempel LA, Miles JR, Keele JW, Wiedmann RT, Vallet JL.

Anim Genet. 2014 Jun;45(3):340-9. doi: 10.1111/age.12131. Epub 2014 Feb 20.


Deletion on chromosome 5 associated with decreased reproductive efficiency in female cattle.

McDaneld TG, Kuehn LA, Thomas MG, Pollak EJ, Keele JW.

J Anim Sci. 2014 Apr;92(4):1378-84. doi: 10.2527/jas.2013-6821. Epub 2014 Feb 3.


Imputation of microsatellite alleles from dense SNP genotypes for parentage verification across multiple Bos taurus and Bos indicus breeds.

McClure MC, Sonstegard TS, Wiggans GR, Van Eenennaam AL, Weber KL, Penedo CT, Berry DP, Flynn J, Garcia JF, Carmo AS, Regitano LC, Albuquerque M, Silva MV, Machado MA, Coffey M, Moore K, Boscher MY, Genestout L, Mazza R, Taylor JF, Schnabel RD, Simpson B, Marques E, McEwan JC, Cromie A, Coutinho LL, Kuehn LA, Keele JW, Piper EK, Cook J, Williams R; Bovine HapMap Consortium, Van Tassell CP.

Front Genet. 2013 Sep 18;4:176. doi: 10.3389/fgene.2013.00176. eCollection 2013.


The change in differing leukocyte populations during vaccination to bovine respiratory disease and their correlations with lung scores, health records, and average daily gain.

Leach RJ, Chitko-McKown CG, Bennett GL, Jones SA, Kachman SD, Keele JW, Leymaster KA, Thallman RM, Kuehn LA.

J Anim Sci. 2013 Aug;91(8):3564-73. doi: 10.2527/jas.2012-5911. Epub 2013 Jun 4.


Breeding and Genetics Symposium: networks and pathways to guide genomic selection.

Snelling WM, Cushman RA, Keele JW, Maltecca C, Thomas MG, Fortes MR, Reverter A.

J Anim Sci. 2013 Feb;91(2):537-52. doi: 10.2527/jas.2012-5784. Epub 2012 Oct 24.


Gene number determination and genetic polymorphism of the gamma delta T cell co-receptor WC1 genes.

Chen C, Herzig CT, Alexander LJ, Keele JW, McDaneld TG, Telfer JC, Baldwin CL.

BMC Genet. 2012 Oct 16;13:86. doi: 10.1186/1471-2156-13-86.


Accuracy of genomic breeding values in multibreed beef cattle populations derived from deregressed breeding values and phenotypes.

Weber KL, Thallman RM, Keele JW, Snelling WM, Bennett GL, Smith TP, McDaneld TG, Allan MF, Van Eenennaam AL, Kuehn LA.

J Anim Sci. 2012 Dec;90(12):4177-90. doi: 10.2527/jas.2011-4586. Epub 2012 Jul 5.


Y are you not pregnant: identification of Y chromosome segments in female cattle with decreased reproductive efficiency.

McDaneld TG, Kuehn LA, Thomas MG, Snelling WM, Sonstegard TS, Matukumalli LK, Smith TP, Pollak EJ, Keele JW.

J Anim Sci. 2012 Jul;90(7):2142-51. doi: 10.2527/jas.2011-4536. Epub 2012 Mar 9.


Physiology and Endocrinology Symposium: How single nucleotide polymorphism chips will advance our knowledge of factors controlling puberty and aid in selecting replacement beef females.

Snelling WM, Cushman RA, Fortes MR, Reverter A, Bennett GL, Keele JW, Kuehn LA, McDaneld TG, Thallman RM, Thomas MG.

J Anim Sci. 2012 Apr;90(4):1152-65. doi: 10.2527/jas.2011-4581. Epub 2011 Oct 28.


Partial-genome evaluation of postweaning feed intake and efficiency of crossbred beef cattle.

Snelling WM, Allan MF, Keele JW, Kuehn LA, Thallman RM, Bennett GL, Ferrell CL, Jenkins TG, Freetly HC, Nielsen MK, Rolfe KM.

J Anim Sci. 2011 Jun;89(6):1731-41. doi: 10.2527/jas.2010-3526. Epub 2011 Feb 4.


Predicting breed composition using breed frequencies of 50,000 markers from the US Meat Animal Research Center 2,000 Bull Project.

Kuehn LA, Keele JW, Bennett GL, McDaneld TG, Smith TP, Snelling WM, Sonstegard TS, Thallman RM.

J Anim Sci. 2011 Jun;89(6):1742-50. doi: 10.2527/jas.2010-3530. Epub 2011 Jan 28.


Genomic regions associated with kyphosis in swine.

Lindholm-Perry AK, Rohrer GA, Kuehn LA, Keele JW, Holl JW, Shackelford SD, Wheeler TL, Nonneman DJ.

BMC Genet. 2010 Dec 21;11:112. doi: 10.1186/1471-2156-11-112.


An atlas of bovine gene expression reveals novel distinctive tissue characteristics and evidence for improving genome annotation.

Harhay GP, Smith TP, Alexander LJ, Haudenschild CD, Keele JW, Matukumalli LK, Schroeder SG, Van Tassell CP, Gresham CR, Bridges SM, Burgess SC, Sonstegard TS.

Genome Biol. 2010;11(10):R102. doi: 10.1186/gb-2010-11-10-r102. Epub 2010 Oct 20.


Analysis of copy number variations among diverse cattle breeds.

Liu GE, Hou Y, Zhu B, Cardone MF, Jiang L, Cellamare A, Mitra A, Alexander LJ, Coutinho LL, Dell'Aquila ME, Gasbarre LC, Lacalandra G, Li RW, Matukumalli LK, Nonneman D, Regitano LC, Smith TP, Song J, Sonstegard TS, Van Tassell CP, Ventura M, Eichler EE, McDaneld TG, Keele JW.

Genome Res. 2010 May;20(5):693-703. doi: 10.1101/gr.105403.110. Epub 2010 Mar 8.

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