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Results: 1 to 20 of 34

1.

Chronic activation of innate immunity correlates with poor prognosis in cancer patients treated with oncolytic adenovirus.

Taipale K, Liikanen I, Juhila J, Turkki R, Tähtinen S, Kankainen M, Vassilev L, Ristimäki A, Koski A, Kanerva A, Diaconu I, Cerullo V, Vähä-Koskela M, Oksanen M, Linder N, Joensuu T, Lundin J, Hemminki A.

Mol Ther. 2015 Aug 27. doi: 10.1038/mt.2015.143. [Epub ahead of print]

PMID:
26310629
2.

Comparative Analysis of Whole-Genome Sequences of Influenza A(H1N1)pdm09 Viruses Isolated from Hospitalized and Nonhospitalized Patients Identifies Missense Mutations That Might Be Associated with Patient Hospital Admissions in Finland during 2009 to 2014.

Mishel P, Ojala T, Benner C, Lakspere T, Bychkov D, Jalovaara P, Kakkola L, Kallio-Kokko H, Kantele A, Kankainen M, Ikonen N, Ripatti S, Julkunen I, Kainov DE.

Genome Announc. 2015 Jul 30;3(4). pii: e00676-15. doi: 10.1128/genomeA.00676-15.

3.

Repeated intratumoral administration of ONCOS-102 leads to systemic antitumor CD8+ T-cell response and robust cellular and transcriptional immune activation at tumor site in a patient with ovarian cancer.

Vassilev L, Ranki T, Joensuu T, Jäger E, Karbach J, Wahle C, Partanen K, Kairemo K, Alanko T, Turkki R, Linder N, Lundin J, Ristimäki A, Kankainen M, Hemminki A, Backman C, Dienel K, von Euler M, Haavisto E, Hakonen T, Juhila J, Jäderberg M, Priha P, Vuolanto A, Pesonen S.

Oncoimmunology. 2015 Apr 1;4(7):e1017702. eCollection 2015 Jul.

PMID:
26140248
4.

Local treatment of a pleural mesothelioma tumor with ONCOS-102 induces a systemic antitumor CD8+ T-cell response, prominent infiltration of CD8+ lymphocytes and Th1 type polarization.

Ranki T, Joensuu T, Jäger E, Karbach J, Wahle C, Kairemo K, Alanko T, Partanen K, Turkki R, Linder N, Lundin J, Ristimäki A, Kankainen M, Hemminki A, Backman C, Dienel K, von Euler M, Haavisto E, Hakonen T, Juhila J, Jaderberg M, Priha P, Vassilev L, Vuolanto A, Pesonen S.

Oncoimmunology. 2014 Dec 15;3(10):e958937. eCollection 2014 Nov.

PMID:
25941579
5.

Immunological data from cancer patients treated with Ad5/3-E2F-Δ24-GMCSF suggests utility for tumor immunotherapy.

Hemminki O, Parviainen S, Juhila J, Turkki R, Linder N, Lundin J, Kankainen M, Ristimäki A, Koski A, Liikanen I, Oksanen M, Nettelbeck DM, Kairemo K, Partanen K, Joensuu T, Kanerva A, Hemminki A.

Oncotarget. 2015 Feb 28;6(6):4467-81.

6.

Comparative genomics of Lactobacillus crispatus suggests novel mechanisms for the competitive exclusion of Gardnerella vaginalis.

Ojala T, Kankainen M, Castro J, Cerca N, Edelman S, Westerlund-Wikström B, Paulin L, Holm L, Auvinen P.

BMC Genomics. 2014 Dec 5;15:1070. doi: 10.1186/1471-2164-15-1070.

7.

Loss of Rad51c accelerates tumourigenesis in sebaceous glands of Trp53-mutant mice.

Tumiati M, Hemmes A, Uusivirta S, Koopal S, Kankainen M, Lehtonen E, Kuznetsov SG.

J Pathol. 2015 Jan;235(1):136-46. doi: 10.1002/path.4455.

PMID:
25270124
8.

Genomics and Proteomics Provide New Insight into the Commensal and Pathogenic Lifestyles of Bovine- and Human-Associated Staphylococcus epidermidis Strains.

Savijoki K, Iivanainen A, Siljamäki P, Laine PK, Paulin L, Karonen T, Pyörälä S, Kankainen M, Nyman TA, Salomäki T, Koskinen P, Holm L, Simojoki H, Taponen S, Sukura A, Kalkkinen N, Auvinen P, Varmanen P.

J Proteome Res. 2014 Jul 18. [Epub ahead of print]

PMID:
25014494
9.

Comparative proteome profiling of bovine and human Staphylococcus epidermidis strains for screening specifically expressed virulence and adaptation proteins.

Siljamäki P, Varmanen P, Kankainen M, Pyörälä S, Karonen T, Iivanainen A, Auvinen P, Paulin L, Laine PK, Taponen S, Simojoki H, Sukura A, Nyman TA, Savijoki K.

Proteomics. 2014 Aug;14(16):1890-4. doi: 10.1002/pmic.201300275. Epub 2014 Jul 10.

PMID:
24909406
10.

Comparative exoprotein profiling of different Staphylococcus epidermidis strains reveals potential link between nonclassical protein export and virulence.

Siljamäki P, Varmanen P, Kankainen M, Sukura A, Savijoki K, Nyman TA.

J Proteome Res. 2014 Jul 3;13(7):3249-61. doi: 10.1021/pr500075j. Epub 2014 Jun 2.

PMID:
24840314
11.

Effects of ellagitannin-rich berries on blood lipids, gut microbiota, and urolithin production in human subjects with symptoms of metabolic syndrome.

Puupponen-Pimiä R, Seppänen-Laakso T, Kankainen M, Maukonen J, Törrönen R, Kolehmainen M, Leppänen T, Moilanen E, Nohynek L, Aura AM, Poutanen K, Tómas-Barberán FA, Espín JC, Oksman-Caldentey KM.

Mol Nutr Food Res. 2013 Dec;57(12):2258-63. doi: 10.1002/mnfr.201300280. Epub 2013 Aug 12.

PMID:
23934737
12.

Systems-level analysis of clinically different phenotypes of juvenile nasopharyngeal angiofibromas.

Renkonen S, Kankainen M, Hagström J, Haglund C, Monni O, Mäkitie AA.

Laryngoscope. 2012 Dec;122(12):2728-35. doi: 10.1002/lary.23592. Epub 2012 Sep 10.

PMID:
22965421
13.

Nonpathogenic Lactobacillus rhamnosus activates the inflammasome and antiviral responses in human macrophages.

Miettinen M, Pietilä TE, Kekkonen RA, Kankainen M, Latvala S, Pirhonen J, Österlund P, Korpela R, Julkunen I.

Gut Microbes. 2012 Nov-Dec;3(6):510-22. doi: 10.4161/gmic.21736. Epub 2012 Aug 16.

14.

BLANNOTATOR: enhanced homology-based function prediction of bacterial proteins.

Kankainen M, Ojala T, Holm L.

BMC Bioinformatics. 2012 Feb 15;13:33. doi: 10.1186/1471-2105-13-33.

15.

Effect of acid stress on protein expression and phosphorylation in Lactobacillus rhamnosus GG.

Koponen J, Laakso K, Koskenniemi K, Kankainen M, Savijoki K, Nyman TA, de Vos WM, Tynkkynen S, Kalkkinen N, Varmanen P.

J Proteomics. 2012 Feb 2;75(4):1357-74. doi: 10.1016/j.jprot.2011.11.009. Epub 2011 Nov 16.

PMID:
22119544
16.

Growth phase-associated changes in the proteome and transcriptome of Lactobacillus rhamnosus GG in industrial-type whey medium.

Laakso K, Koskenniemi K, Koponen J, Kankainen M, Surakka A, Salusjärvi T, Auvinen P, Savijoki K, Nyman TA, Kalkkinen N, Tynkkynen S, Varmanen P.

Microb Biotechnol. 2011 Nov;4(6):746-66. doi: 10.1111/j.1751-7915.2011.00275.x. Epub 2011 Sep 1.

17.

Identification of regulatory elements in the AGT1 promoter of ale and lager strains of brewer's yeast.

Vidgren V, Kankainen M, Londesborough J, Ruohonen L.

Yeast. 2011 Aug;28(8):579-94. doi: 10.1002/yea.1888. Epub 2011 Jul 13.

PMID:
21755532
18.

Adhesive polypeptides of Staphylococcus aureus identified using a novel secretion library technique in Escherichia coli.

Kylväjä R, Kankainen M, Holm L, Westerlund-Wikström B.

BMC Microbiol. 2011 May 27;11:117. doi: 10.1186/1471-2180-11-117.

19.

Comparative proteome cataloging of Lactobacillus rhamnosus strains GG and Lc705.

Savijoki K, Lietzén N, Kankainen M, Alatossava T, Koskenniemi K, Varmanen P, Nyman TA.

J Proteome Res. 2011 Aug 5;10(8):3460-73. doi: 10.1021/pr2000896. Epub 2011 Jun 17.

PMID:
21615180
20.

MPEA--metabolite pathway enrichment analysis.

Kankainen M, Gopalacharyulu P, Holm L, Oresic M.

Bioinformatics. 2011 Jul 1;27(13):1878-9. doi: 10.1093/bioinformatics/btr278. Epub 2011 May 5.

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