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Results: 1 to 20 of 416

1.

The mzTab Data Exchange Format: communicating MS-based proteomics and metabolomics experimental results to a wider audience.

Griss J, Jones AR, Sachsenberg T, Walzer M, Gatto L, Hartler J, Thallinger GG, Salek RM, Steinbeck C, Neuhauser N, Cox J, Neumann S, Fan J, Reisinger F, Xu QW, Del Toro N, Perez-Riverol Y, Ghali F, Bandeira N, Xenarios I, Kohlbacher O, Vizcaino JA, Hermjakob H.

Mol Cell Proteomics. 2014 Jun 30. pii: mcp.O113.036681. [Epub ahead of print]

PMID:
24980485
[PubMed - as supplied by publisher]
Free Article
2.

A High-Resolution Spatiotemporal Atlas of Gene Expression of the Developing Mouse Brain.

Thompson CL, Ng L, Menon V, Martinez S, Lee CK, Glattfelder K, Sunkin SM, Henry A, Lau C, Dang C, Garcia-Lopez R, Martinez-Ferre A, Pombero A, Rubenstein JL, Wakeman WB, Hohmann J, Dee N, Sodt AJ, Young R, Smith K, Nguyen TN, Kidney J, Kuan L, Jeromin A, Kaykas A, Miller J, Page D, Orta G, Bernard A, Riley Z, Smith S, Wohnoutka P, Hawrylycz MJ, Puelles L, Jones AR.

Neuron. 2014 Jun 17. pii: S0896-6273(14)00448-6. doi: 10.1016/j.neuron.2014.05.033. [Epub ahead of print]

PMID:
24952961
[PubMed - as supplied by publisher]
3.

Physical activity, diet and BMI in children aged 6-8 years: a cross-sectional analysis.

Basterfield L, Jones AR, Parkinson KN, Reilly J, Pearce MS, Reilly JJ, Adamson AJ; Gateshead Millennium Study Core Team.

BMJ Open. 2014 Jun 5;4(6):e005001. doi: 10.1136/bmjopen-2014-005001.

PMID:
24902732
[PubMed]
Free PMC Article
4.

Sensitivity of the modelled deposition of Caesium-137 from the Fukushima Dai-ichi nuclear power plant to the wet deposition parameterisation in NAME.

Leadbetter SJ, Hort MC, Jones AR, Webster HN, Draxler RR.

J Environ Radioact. 2014 Apr 15. pii: S0265-931X(14)00103-9. doi: 10.1016/j.jenvrad.2014.03.018. [Epub ahead of print]

PMID:
24745690
[PubMed - as supplied by publisher]
5.

ProteomeXchange provides globally coordinated proteomics data submission and dissemination.

Vizcaíno JA, Deutsch EW, Wang R, Csordas A, Reisinger F, Ríos D, Dianes JA, Sun Z, Farrah T, Bandeira N, Binz PA, Xenarios I, Eisenacher M, Mayer G, Gatto L, Campos A, Chalkley RJ, Kraus HJ, Albar JP, Martinez-Bartolomé S, Apweiler R, Omenn GS, Martens L, Jones AR, Hermjakob H.

Nat Biotechnol. 2014 Mar;32(3):223-6. doi: 10.1038/nbt.2839. No abstract available.

PMID:
24727771
[PubMed - in process]
6.

Transcriptional landscape of the prenatal human brain.

Miller JA, Ding SL, Sunkin SM, Smith KA, Ng L, Szafer A, Ebbert A, Riley ZL, Royall JJ, Aiona K, Arnold JM, Bennet C, Bertagnolli D, Brouner K, Butler S, Caldejon S, Carey A, Cuhaciyan C, Dalley RA, Dee N, Dolbeare TA, Facer BA, Feng D, Fliss TP, Gee G, Goldy J, Gourley L, Gregor BW, Gu G, Howard RE, Jochim JM, Kuan CL, Lau C, Lee CK, Lee F, Lemon TA, Lesnar P, McMurray B, Mastan N, Mosqueda N, Naluai-Cecchini T, Ngo NK, Nyhus J, Oldre A, Olson E, Parente J, Parker PD, Parry SE, Stevens A, Pletikos M, Reding M, Roll K, Sandman D, Sarreal M, Shapouri S, Shapovalova NV, Shen EH, Sjoquist N, Slaughterbeck CR, Smith M, Sodt AJ, Williams D, Zöllei L, Fischl B, Gerstein MB, Geschwind DH, Glass IA, Hawrylycz MJ, Hevner RF, Huang H, Jones AR, Knowles JA, Levitt P, Phillips JW, Sestan N, Wohnoutka P, Dang C, Bernard A, Hohmann JG, Lein ES.

Nature. 2014 Apr 10;508(7495):199-206. doi: 10.1038/nature13185. Epub 2014 Apr 2.

PMID:
24695229
[PubMed - indexed for MEDLINE]
7.

A mesoscale connectome of the mouse brain.

Oh SW, Harris JA, Ng L, Winslow B, Cain N, Mihalas S, Wang Q, Lau C, Kuan L, Henry AM, Mortrud MT, Ouellette B, Nguyen TN, Sorensen SA, Slaughterbeck CR, Wakeman W, Li Y, Feng D, Ho A, Nicholas E, Hirokawa KE, Bohn P, Joines KM, Peng H, Hawrylycz MJ, Phillips JW, Hohmann JG, Wohnoutka P, Gerfen CR, Koch C, Bernard A, Dang C, Jones AR, Zeng H.

Nature. 2014 Apr 10;508(7495):207-14. doi: 10.1038/nature13186. Epub 2014 Apr 2.

PMID:
24695228
[PubMed - indexed for MEDLINE]
8.

Numerical compression schemes for proteomics mass spectrometry data.

Teleman J, Dowsey AW, Gonzalez-Galarza FF, Perkins S, Pratt B, Röst HL, Malmström L, Malmström J, Jones AR, Deutsch EW, Levander F.

Mol Cell Proteomics. 2014 Jun;13(6):1537-42. doi: 10.1074/mcp.O114.037879. Epub 2014 Mar 27.

PMID:
24677029
[PubMed - in process]
9.

jmzTab: A Java interface to the mzTab data standard.

Xu QW, Griss J, Wang R, Jones AR, Hermjakob H, Vizcaíno JA.

Proteomics. 2014 Jun;14(11):1328-32. doi: 10.1002/pmic.201300560. Epub 2014 Apr 29.

PMID:
24659499
[PubMed - in process]
10.

Identifying blood-brain-barrier selective single-chain antibody fragments.

Jones AR, Stutz CC, Zhou Y, Marks JD, Shusta EV.

Biotechnol J. 2014 May;9(5):664-74. doi: 10.1002/biot.201300550. Epub 2014 Mar 18.

PMID:
24644233
[PubMed - in process]
11.

Health utility decreases with increasing clinical stage in amyotrophic lateral sclerosis.

Jones AR, Jivraj N, Balendra R, Murphy C, Kelly J, Thornhill M, Young C, Shaw PJ, Leigh PN, Turner MR, Steen IN, McCrone P, Al-Chalabi A.

Amyotroph Lateral Scler Frontotemporal Degener. 2014 Jun;15(3-4):285-91. doi: 10.3109/21678421.2013.872149. Epub 2014 Feb 7.

PMID:
24641613
[PubMed - in process]
12.

Systematic comparison of adeno-associated virus and biotinylated dextran amine reveals equivalent sensitivity between tracers and novel projection targets in the mouse brain.

Wang Q, Henry AM, Harris JA, Oh SW, Joines KM, Nyhus J, Hirokawa KE, Dee N, Mortrud M, Parry S, Ouellette B, Caldejon S, Bernard A, Jones AR, Zeng H, Hohmann JG.

J Comp Neurol. 2014 Jun 15;522(9):1989-2012. doi: 10.1002/cne.23567.

PMID:
24639291
[PubMed - in process]
13.

Autonomic healing of carbon fiber/epoxy interfaces.

Jones AR, Cintora A, White SR, Sottos NR.

ACS Appl Mater Interfaces. 2014 May 14;6(9):6033-9. doi: 10.1021/am500536t. Epub 2014 Mar 27.

PMID:
24617614
[PubMed - in process]
14.

Microencapsulation of gallium-indium (Ga-In) liquid metal for self-healing applications.

Blaiszik BJ, Jones AR, Sottos NR, White SR.

J Microencapsul. 2014;31(4):350-4. doi: 10.3109/02652048.2013.858790. Epub 2014 Feb 4.

PMID:
24495196
[PubMed - in process]
15.

Fibroblasts from type 1 diabetics exhibit enhanced Ca(2+) mobilization after TNF or fat exposure.

Husni NR, Jones AR 4th, Simmons AL, Corkey BE.

PLoS One. 2014 Jan 23;9(1):e87068. doi: 10.1371/journal.pone.0087068. eCollection 2014.

PMID:
24466329
[PubMed - in process]
Free PMC Article
16.

The jmzQuantML programming interface and validator for the mzQuantML data standard.

Qi D, Krishna R, Jones AR.

Proteomics. 2014 Mar;14(6):685-8. doi: 10.1002/pmic.201300281. Epub 2014 Feb 18.

PMID:
24453188
[PubMed - in process]
Free PMC Article
17.

Increased mortality in adult patients with trauma transfused with blood components compared with whole blood.

Jones AR, Frazier SK.

J Trauma Nurs. 2014 Jan-Feb;21(1):22-9. doi: 10.1097/JTN.0000000000000025.

PMID:
24399315
[PubMed - in process]
18.

Conserved molecular signatures of neurogenesis in the hippocampal subgranular zone of rodents and primates.

Miller JA, Nathanson J, Franjic D, Shim S, Dalley RA, Shapouri S, Smith KA, Sunkin SM, Bernard A, Bennett JL, Lee CK, Hawrylycz MJ, Jones AR, Amaral DG, Šestan N, Gage FH, Lein ES.

Development. 2013 Nov;140(22):4633-44. doi: 10.1242/dev.097212. Epub 2013 Oct 23.

PMID:
24154525
[PubMed - indexed for MEDLINE]
Free Article
19.

Preparing to work with big data in proteomics - a report on the HUPO-PSI Spring Workshop: April 15-17, 2013, Liverpool, UK.

Orchard S, Binz PA, Jones AR, Vizcaino JA, Deutsch EW, Hermjakob H.

Proteomics. 2013 Oct;13(20):2931-7. doi: 10.1002/pmic.201370166.

PMID:
24108681
[PubMed - indexed for MEDLINE]
20.

Creation of an adiposity index for children aged 6-8 years: the Gateshead Millennium Study.

Pearce MS, James PW, Franco-Villoria M, Parkinson KN, Jones AR, Basterfield L, Drewett RF, Wright CM, Adamson AJ.

Biomed Res Int. 2013;2013:431825. doi: 10.1155/2013/431825. Epub 2013 Sep 8.

PMID:
24089678
[PubMed - indexed for MEDLINE]
Free PMC Article

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