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Results: 16

1.

A global investigation of gene deletion strains that affect premature stop codon bypass in yeast, Saccharomyces cerevisiae.

Samanfar B, Tan le H, Shostak K, Chalabian F, Wu Z, Alamgir M, Sunba N, Burnside D, Omidi K, Hooshyar M, Galván Márquez I, Jessulat M, Smith ML, Babu M, Azizi A, Golshani A.

Mol Biosyst. 2014 Apr;10(4):916-24. doi: 10.1039/c3mb70501c. Epub 2014 Feb 18.

PMID:
24535059
[PubMed - in process]
2.

Phosphatase complex Pph3/Psy2 is involved in regulation of efficient non-homologous end-joining pathway in the yeast Saccharomyces cerevisiae.

Omidi K, Hooshyar M, Jessulat M, Samanfar B, Sanders M, Burnside D, Pitre S, Schoenrock A, Xu J, Babu M, Golshani A.

PLoS One. 2014 Jan 31;9(1):e87248. doi: 10.1371/journal.pone.0087248. eCollection 2014.

PMID:
24498054
[PubMed - in process]
Free PMC Article
3.

Mapping the functional yeast ABC transporter interactome.

Snider J, Hanif A, Lee ME, Jin K, Yu AR, Graham C, Chuk M, Damjanovic D, Wierzbicka M, Tang P, Balderes D, Wong V, Jessulat M, Darowski KD, San Luis BJ, Shevelev I, Sturley SL, Boone C, Greenblatt JF, Zhang Z, Paumi CM, Babu M, Park HO, Michaelis S, Stagljar I.

Nat Chem Biol. 2013 Sep;9(9):565-72. doi: 10.1038/nchembio.1293. Epub 2013 Jul 7.

PMID:
23831759
[PubMed - indexed for MEDLINE]
Free PMC Article
4.

Recent advances in protein-protein interaction prediction: experimental and computational methods.

Jessulat M, Pitre S, Gui Y, Hooshyar M, Omidi K, Samanfar B, Tan le H, Alamgir M, Green J, Dehne F, Golshani A.

Expert Opin Drug Discov. 2011 Sep;6(9):921-35. doi: 10.1517/17460441.2011.603722. Epub 2011 Jul 29.

PMID:
22646215
[PubMed]
5.

Short Co-occurring Polypeptide Regions Can Predict Global Protein Interaction Maps.

Pitre S, Hooshyar M, Schoenrock A, Samanfar B, Jessulat M, Green JR, Dehne F, Golshani A.

Sci Rep. 2012;2:239. doi: 10.1038/srep00239. Epub 2012 Jan 30.

PMID:
22355752
[PubMed]
Free PMC Article
6.

Ribosome-dependent ATPase interacts with conserved membrane protein in Escherichia coli to modulate protein synthesis and oxidative phosphorylation.

Babu M, Aoki H, Chowdhury WQ, Gagarinova A, Graham C, Phanse S, Laliberte B, Sunba N, Jessulat M, Golshani A, Emili A, Greenblatt JF, Ganoza MC.

PLoS One. 2011 Apr 27;6(4):e18510. doi: 10.1371/journal.pone.0018510.

PMID:
21556145
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

Chemical-genetic profile analysis of five inhibitory compounds in yeast.

Alamgir M, Erukova V, Jessulat M, Azizi A, Golshani A.

BMC Chem Biol. 2010 Aug 6;10:6. doi: 10.1186/1472-6769-10-6.

PMID:
20691087
[PubMed]
Free PMC Article
8.

Disruption of fungal cell wall by antifungal Echinacea extracts.

Mir-Rashed N, Cruz I, Jessulat M, Dumontier M, Chesnais C, Ng J, Amiguet VT, Golshani A, Arnason JT, Smith ML.

Med Mycol. 2010 Nov;48(7):949-58. doi: 10.3109/13693781003767584.

PMID:
20429770
[PubMed - indexed for MEDLINE]
9.

In vivo investigation of protein-protein interactions for helicases using tandem affinity purification.

Jessulat M, Buist T, Alamgir M, Hooshyar M, Xu J, Aoki H, Ganoza MC, Butland G, Golshani A.

Methods Mol Biol. 2010;587:99-111. doi: 10.1007/978-1-60327-355-8_7.

PMID:
20225144
[PubMed - indexed for MEDLINE]
10.

Chemical-genetic profile analysis in yeast suggests that a previously uncharacterized open reading frame, YBR261C, affects protein synthesis.

Alamgir M, Eroukova V, Jessulat M, Xu J, Golshani A.

BMC Genomics. 2008 Dec 3;9:583. doi: 10.1186/1471-2164-9-583.

PMID:
19055778
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

Global investigation of protein-protein interactions in yeast Saccharomyces cerevisiae using re-occurring short polypeptide sequences.

Pitre S, North C, Alamgir M, Jessulat M, Chan A, Luo X, Green JR, Dumontier M, Dehne F, Golshani A.

Nucleic Acids Res. 2008 Aug;36(13):4286-94. doi: 10.1093/nar/gkn390. Epub 2008 Jun 27.

PMID:
18586826
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

Interacting proteins Rtt109 and Vps75 affect the efficiency of non-homologous end-joining in Saccharomyces cerevisiae.

Jessulat M, Alamgir M, Salsali H, Greenblatt J, Xu J, Golshani A.

Arch Biochem Biophys. 2008 Jan 15;469(2):157-64. Epub 2007 Nov 9.

PMID:
18036332
[PubMed - indexed for MEDLINE]
13.

Antifungal and antioxidant activities of the phytomedicine pipsissewa, Chimaphila umbellata.

Galván IJ, Mir-Rashed N, Jessulat M, Atanya M, Golshani A, Durst T, Petit P, Amiguet VT, Boekhout T, Summerbell R, Cruz I, Arnason JT, Smith ML.

Phytochemistry. 2008 Feb;69(3):738-46. Epub 2007 Oct 22.

PMID:
17950387
[PubMed - indexed for MEDLINE]
14.

Colony size measurement of the yeast gene deletion strains for functional genomics.

Memarian N, Jessulat M, Alirezaie J, Mir-Rashed N, Xu J, Zareie M, Smith M, Golshani A.

BMC Bioinformatics. 2007 Apr 4;8:117.

PMID:
17408490
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

Investigating the in vivo activity of the DeaD protein using protein-protein interactions and the translational activity of structured chloramphenicol acetyltransferase mRNAs.

Butland G, Krogan NJ, Xu J, Yang WH, Aoki H, Li JS, Krogan N, Menendez J, Cagney G, Kiani GC, Jessulat MG, Datta N, Ivanov I, Abouhaidar MG, Emili A, Greenblatt J, Ganoza MC, Golshani A.

J Cell Biochem. 2007 Feb 15;100(3):642-52.

PMID:
16983699
[PubMed - indexed for MEDLINE]
16.

PIPE: a protein-protein interaction prediction engine based on the re-occurring short polypeptide sequences between known interacting protein pairs.

Pitre S, Dehne F, Chan A, Cheetham J, Duong A, Emili A, Gebbia M, Greenblatt J, Jessulat M, Krogan N, Luo X, Golshani A.

BMC Bioinformatics. 2006 Jul 27;7:365.

PMID:
16872538
[PubMed - indexed for MEDLINE]
Free PMC Article

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