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Results: 1 to 20 of 31

1.

Defining a modular signalling network from the fly interactome.

Baudot A, Angelelli JB, Guénoche A, Jacq B, Brun C.

BMC Syst Biol. 2008 May 19;2:45. doi: 10.1186/1752-0509-2-45.

PMID:
18489752
[PubMed - indexed for MEDLINE]
Free PMC Article
2.

TreeDyn: towards dynamic graphics and annotations for analyses of trees.

Chevenet F, Brun C, Bañuls AL, Jacq B, Christen R.

BMC Bioinformatics. 2006 Oct 10;7:439.

PMID:
17032440
[PubMed - indexed for MEDLINE]
Free PMC Article
3.

PRODISTIN Web Site: a tool for the functional classification of proteins from interaction networks.

Baudot A, Martin D, Mouren P, Chevenet F, Guénoche A, Jacq B, Brun C.

Bioinformatics. 2006 Jan 15;22(2):248-50. Epub 2005 Nov 3.

PMID:
16269417
[PubMed - indexed for MEDLINE]
Free Article
4.

Protein interaction mapping: a Drosophila case study.

Formstecher E, Aresta S, Collura V, Hamburger A, Meil A, Trehin A, Reverdy C, Betin V, Maire S, Brun C, Jacq B, Arpin M, Bellaiche Y, Bellusci S, Benaroch P, Bornens M, Chanet R, Chavrier P, Delattre O, Doye V, Fehon R, Faye G, Galli T, Girault JA, Goud B, de Gunzburg J, Johannes L, Junier MP, Mirouse V, Mukherjee A, Papadopoulo D, Perez F, Plessis A, Rossé C, Saule S, Stoppa-Lyonnet D, Vincent A, White M, Legrain P, Wojcik J, Camonis J, Daviet L.

Genome Res. 2005 Mar;15(3):376-84. Epub 2005 Feb 14.

PMID:
15710747
[PubMed - indexed for MEDLINE]
Free PMC Article
5.

GOToolBox: functional analysis of gene datasets based on Gene Ontology.

Martin D, Brun C, Remy E, Mouren P, Thieffry D, Jacq B.

Genome Biol. 2004;5(12):R101. Epub 2004 Nov 26.

PMID:
15575967
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

A scale of functional divergence for yeast duplicated genes revealed from analysis of the protein-protein interaction network.

Baudot A, Jacq B, Brun C.

Genome Biol. 2004;5(10):R76. Epub 2004 Sep 15.

PMID:
15461795
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

The HUPO PSI's molecular interaction format--a community standard for the representation of protein interaction data.

Hermjakob H, Montecchi-Palazzi L, Bader G, Wojcik J, Salwinski L, Ceol A, Moore S, Orchard S, Sarkans U, von Mering C, Roechert B, Poux S, Jung E, Mersch H, Kersey P, Lappe M, Li Y, Zeng R, Rana D, Nikolski M, Husi H, Brun C, Shanker K, Grant SG, Sander C, Bork P, Zhu W, Pandey A, Brazma A, Jacq B, Vidal M, Sherman D, Legrain P, Cesareni G, Xenarios I, Eisenberg D, Steipe B, Hogue C, Apweiler R.

Nat Biotechnol. 2004 Feb;22(2):177-83.

PMID:
14755292
[PubMed - indexed for MEDLINE]
8.

Functional classification of proteins for the prediction of cellular function from a protein-protein interaction network.

Brun C, Chevenet F, Martin D, Wojcik J, Guénoche A, Jacq B.

Genome Biol. 2003;5(1):R6. Epub 2003 Dec 15.

PMID:
14709178
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

Approach of the functional evolution of duplicated genes in Saccharomyces cerevisiae using a new classification method based on protein-protein interaction data.

Brun C, Guénoche A, Jacq B.

J Struct Funct Genomics. 2003;3(1-4):213-24. Review.

PMID:
12836700
[PubMed - indexed for MEDLINE]
10.

Genome-wide identification of in vivo Drosophila Engrailed-binding DNA fragments and related target genes.

Solano PJ, Mugat B, Martin D, Girard F, Huibant JM, Ferraz C, Jacq B, Demaille J, Maschat F.

Development. 2003 Apr;130(7):1243-54.

PMID:
12588842
[PubMed - indexed for MEDLINE]
Free Article
11.

Protein function from the perspective of molecular interactions and genetic networks.

Jacq B.

Brief Bioinform. 2001 Mar;2(1):38-50.

PMID:
11465061
[PubMed - indexed for MEDLINE]
Free Article
12.

Detecting Gene Symbols and Names in Biological Texts: A First Step toward Pertinent Information Extraction.

Proux D, Rechenmann F, Julliard L, Pillet V V, Jacq B.

Genome Inform Ser Workshop Genome Inform. 1998;9:72-80.

PMID:
11072323
[PubMed - as supplied by publisher]
13.

Grasping at molecular interactions and genetic networks in Drosophila melanogaster using FlyNets, an Internet database.

Sanchez C, Lachaize C, Janody F, Bellon B, Röder L, Euzenat J, Rechenmann F, Jacq B.

Nucleic Acids Res. 1999 Jan 1;27(1):89-94.

PMID:
9847149
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

Mutations in ccf, a novel Drosophila gene encoding a chromosomal factor, affect progression through mitosis and interact with Pc-G mutations.

Kodjabachian L, Delaage M, Maurel C, Miassod R, Jacq B, Rosset R.

EMBO J. 1998 Feb 16;17(4):1063-75.

PMID:
9463384
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

FlyNets and GIF-DB, two internet databases for molecular interactions in Drosophila melanogaster.

Mohr E, Horn F, Janody F, Sanchez C, Pillet V, Bellon B, Röder L, Jacq B.

Nucleic Acids Res. 1998 Jan 1;26(1):89-93.

PMID:
9399807
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

A knowledge base for D. melanogaster gene interactions involved in pattern formation.

Euzenat J, Chemla C, Jacq B.

Proc Int Conf Intell Syst Mol Biol. 1997;5:108-19.

PMID:
9322024
[PubMed - indexed for MEDLINE]
17.

GIF-DB, a WWW database on gene interactions involved in Drosophila melanogaster development.

Jacq B, Horn F, Janody F, Gompel N, Serralbo O, Mohr E, Leroy C, Bellon B, Fasano L, Laurenti P, Röder L.

Nucleic Acids Res. 1997 Jan 1;25(1):67-71.

PMID:
9016506
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

The Drosophila teashirt homeotic protein is a DNA-binding protein and modulo, a HOM-C regulated modifier of variegation, is a likely candidate for being a direct target gene.

Alexandre E, Graba Y, Fasano L, Gallet A, Perrin L, De Zulueta P, Pradel J, Kerridge S, Jacq B.

Mech Dev. 1996 Oct;59(2):191-204.

PMID:
8951796
[PubMed - indexed for MEDLINE]
19.

Homeotic complex and teashirt genes co-operate to establish trunk segmental identities in Drosophila.

de Zulueta P, Alexandre E, Jacq B, Kerridge S.

Development. 1994 Aug;120(8):2287-96.

PMID:
7925029
[PubMed - indexed for MEDLINE]
Free Article
20.

Factors influencing T-DNA transfer in Agrobacterium-mediated transformation of sugarbeet.

Jacq B, Lesobre O, Sangwan RS, Sangwan-Norreel BS.

Plant Cell Rep. 1993 Sep;12(11):621-4. doi: 10.1007/BF00232811.

PMID:
24201875
[PubMed]

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