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Development of a Custom-Designed, Pan Genomic DNA Microarray to Characterize Strain-Level Diversity among Cronobacter spp.

Tall BD, Gangiredla J, Gopinath GR, Yan Q, Chase HR, Lee B, Hwang S, Trach L, Park E, Yoo Y, Chung T, Jackson SA, Patel IR, Sathyamoorthy V, Pava-Ripoll M, Kotewicz ML, Carter L, Iversen C, Pagotto F, Stephan R, Lehner A, Fanning S, Grim CJ.

Front Pediatr. 2015 Apr 30;3:36. doi: 10.3389/fped.2015.00036. eCollection 2015.


Identification of QTLs for Rust Resistance in the Peanut Wild Species Arachis magna and the Development of KASP Markers for Marker Assisted Selection.

Leal-Bertioli SC, Cavalcante U, Gouveia EG, Ballén-Taborda C, Shirasawa K, Guimarães PM, Jackson SA, Bertioli DJ, Moretzsohn MC.

G3 (Bethesda). 2015 May 5. pii: g3.115.018796. doi: 10.1534/g3.115.018796. [Epub ahead of print]


Transposons play an important role in the evolution and diversification of centromeres among closely related species.

Gao D, Jiang N, Wing RA, Jiang J, Jackson SA.

Front Plant Sci. 2015 Apr 7;6:216. doi: 10.3389/fpls.2015.00216. eCollection 2015.


Maribacter spongiicola sp. nov., and Maribacter vaceletii sp. nov., isolated from marine sponges and emended description of the genus Maribacter.

Jackson SA, Kennedy J, Morrissey JP, O'Gara F, Dobson AD.

Int J Syst Evol Microbiol. 2015 Apr 1. pii: ijs.0.000224. doi: 10.1099/ijs.0.000224. [Epub ahead of print]


Gene Network Reconstruction by Integration of Prior Biological Knowledge.

Li Y, Jackson SA.

G3 (Bethesda). 2015 Mar 30. pii: g3.115.018127. doi: 10.1534/g3.115.018127. [Epub ahead of print]


A new approach for annotation of transposable elements using small RNA mapping.

El Baidouri M, Kim KD, Abernathy B, Arikit S, Maumus F, Panaud O, Meyers BC, Jackson SA.

Nucleic Acids Res. 2015 Mar 26. pii: gkv257. [Epub ahead of print]


Metagenomics for the discovery of novel biosurfactants of environmental interest from marine ecosystems.

Jackson SA, Borchert E, O'Gara F, Dobson AD.

Curr Opin Biotechnol. 2015 Mar 23;33:176-182. doi: 10.1016/j.copbio.2015.03.004. [Epub ahead of print] Review.


Characterization of a Synechocystis sp. PCC 6803 double mutant lacking the CyanoP and Ycf48 proteins of Photosystem II.

Jackson SA, Eaton-Rye JJ.

Photosynth Res. 2015 May;124(2):217-29. doi: 10.1007/s11120-015-0122-0. Epub 2015 Mar 24.


Commentary-a united front: using the range of psychological variance in cutting-edge practice and emerging research.

Jackson SA, Kleitman S.

New Dir Child Adolesc Dev. 2015 Spring;2015(147):123-6. doi: 10.1002/cad.20077.


Single Nucleotide Polymorphism Identification in Polyploids: A Review, Example, and Recommendations.

Clevenger J, Chavarro C, Pearl SA, Ozias-Akins P, Jackson SA.

Mol Plant. 2015 Feb 10. pii: S1674-2052(15)00130-6. doi: 10.1016/j.molp.2015.02.002. [Epub ahead of print] Review.


Comparison of Fracture Risk Prediction among Individuals with Reduced and Normal Kidney Function.

Naylor KL, Garg AX, Zou G, Langsetmo L, Leslie WD, Fraser LA, Adachi JD, Morin S, Goltzman D, Lentle B, Jackson SA, Josse RG, Jamal SA.

Clin J Am Soc Nephrol. 2015 Apr 7;10(4):646-53. doi: 10.2215/CJN.06040614. Epub 2015 Feb 5.


Collaborative rewiring of the pluripotency network by chromatin and signalling modulating pathways.

Tran KA, Jackson SA, Olufs ZP, Zaidan NZ, Leng N, Kendziorski C, Roy S, Sridharan R.

Nat Commun. 2015 Feb 4;6:6188. doi: 10.1038/ncomms7188.


Transcriptomic changes due to water deficit define a general soybean response and accession-specific pathways for drought avoidance.

Shin JH, Vaughn JN, Abdel-Haleem H, Chavarro C, Abernathy B, Kim KD, Jackson SA, Li Z.

BMC Plant Biol. 2015 Feb 3;15:26. doi: 10.1186/s12870-015-0422-8.


Low cognitive load and reduced arousal impede practice effects on executive functioning, metacognitive confidence and decision making.

Jackson SA, Kleitman S, Aidman E.

PLoS One. 2014 Dec 30;9(12):e115689. doi: 10.1371/journal.pone.0115689. eCollection 2014.


Control of metabolic adaptation to fasting by dILP6-induced insulin signaling in Drosophila oenocytes.

Chatterjee D, Katewa SD, Qi Y, Jackson SA, Kapahi P, Jasper H.

Proc Natl Acad Sci U S A. 2014 Dec 16;111(50):17959-64. doi: 10.1073/pnas.1409241111. Epub 2014 Dec 3.


Genome sequence of mungbean and insights into evolution within Vigna species.

Kang YJ, Kim SK, Kim MY, Lestari P, Kim KH, Ha BK, Jun TH, Hwang WJ, Lee T, Lee J, Shim S, Yoon MY, Jang YE, Han KS, Taeprayoon P, Yoon N, Somta P, Tanya P, Kim KS, Gwag JG, Moon JK, Lee YH, Park BS, Bombarely A, Doyle JJ, Jackson SA, Schafleitner R, Srinives P, Varshney RK, Lee SH.

Nat Commun. 2014 Nov 11;5:5443. doi: 10.1038/ncomms6443.


An RNA-Seq based gene expression atlas of the common bean.

O'Rourke JA, Iniguez LP, Fu F, Bucciarelli B, Miller SS, Jackson SA, McClean PE, Li J, Dai X, Zhao PX, Hernandez G, Vance CP.

BMC Genomics. 2014 Oct 6;15:866. doi: 10.1186/1471-2164-15-866.


Detecting SNPs underlying domestication-related traits in soybean.

Li YH, Reif JC, Jackson SA, Ma YS, Chang RZ, Qiu LJ.

BMC Plant Biol. 2014 Sep 26;14:251. doi: 10.1186/s12870-014-0251-1.


De novo assembly of soybean wild relatives for pan-genome analysis of diversity and agronomic traits.

Li YH, Zhou G, Ma J, Jiang W, Jin LG, Zhang Z, Guo Y, Zhang J, Sui Y, Zheng L, Zhang SS, Zuo Q, Shi XH, Li YF, Zhang WK, Hu Y, Kong G, Hong HL, Tan B, Song J, Liu ZX, Wang Y, Ruan H, Yeung CK, Liu J, Wang H, Zhang LJ, Guan RX, Wang KJ, Li WB, Chen SY, Chang RZ, Jiang Z, Jackson SA, Li R, Qiu LJ.

Nat Biotechnol. 2014 Oct;32(10):1045-52. doi: 10.1038/nbt.2979. Epub 2014 Sep 14.


Removal of both Ycf48 and Psb27 in Synechocystis sp. PCC 6803 disrupts Photosystem II assembly and alters Q(A)(-) oxidation in the mature complex.

Jackson SA, Hervey JR, Dale AJ, Eaton-Rye JJ.

FEBS Lett. 2014 Oct 16;588(20):3751-60. doi: 10.1016/j.febslet.2014.08.024. Epub 2014 Aug 27.

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