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Results: 9

1.

A quantitative model of the initiation of DNA replication in Saccharomyces cerevisiae predicts the effects of system perturbations.

Gidvani RD, Sudmant P, Li G, DaSilva LF, McConkey BJ, Duncker BP, Ingalls BP.

BMC Syst Biol. 2012 Jun 27;6:78. doi: 10.1186/1752-0509-6-78.

PMID:
22738223
[PubMed - indexed for MEDLINE]
Free PMC Article
2.

Differential chromatin proteomics of the MMS-induced DNA damage response in yeast.

Kim DR, Gidvani RD, Ingalls BP, Duncker BP, McConkey BJ.

Proteome Sci. 2011 Oct 4;9:62. doi: 10.1186/1477-5956-9-62.

PMID:
21967861
[PubMed]
Free PMC Article
3.

Proteomics analysis of chinese hamster ovary cells undergoing apoptosis during prolonged cultivation.

Wei YY, Naderi S, Meshram M, Budman H, Scharer JM, Ingalls BP, McConkey BJ.

Cytotechnology. 2011 Dec;63(6):663-77. doi: 10.1007/s10616-011-9385-2. Epub 2011 Aug 19.

PMID:
21853334
[PubMed]
Free PMC Article
4.

Considerations for using integral feedback control to construct a perfectly adapting synthetic gene network.

Ang J, Bagh S, Ingalls BP, McMillen DR.

J Theor Biol. 2010 Oct 21;266(4):723-38. doi: 10.1016/j.jtbi.2010.07.034. Epub 2010 Aug 3.

PMID:
20688080
[PubMed - indexed for MEDLINE]
5.

Estimating the stochastic bifurcation structure of cellular networks.

Song C, Phenix H, Abedi V, Scott M, Ingalls BP, Kaern M, Perkins TJ.

PLoS Comput Biol. 2010 Mar 5;6(3):e1000699. doi: 10.1371/journal.pcbi.1000699. Erratum in: PLoS Comput Biol. 2010;6(3). doi: 10.1371/annotation/9a35fa58-f81c-41b4-9fa9-c1aeedbf0fff.

PMID:
20221261
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

Sequential activation of metabolic pathways: a dynamic optimization approach.

OyarzĂșn DA, Ingalls BP, Middleton RH, Kalamatianos D.

Bull Math Biol. 2009 Nov;71(8):1851-72. doi: 10.1007/s11538-009-9427-5. Epub 2009 May 2.

PMID:
19412635
[PubMed - indexed for MEDLINE]
7.

Systems level modeling of the cell cycle using budding yeast.

Ingalls BP, Duncker BP, Kim DR, McConkey BJ.

Cancer Inform. 2007 Dec 11;3:357-70.

PMID:
19455254
[PubMed]
Free PMC Article
8.

Autonomously oscillating biochemical systems: parametric sensitivity of extrema and period.

Ingalls BP.

Syst Biol (Stevenage). 2004 Jun;1(1):62-70.

PMID:
17052116
[PubMed - indexed for MEDLINE]
9.

Sensitivity analysis of stoichiometric networks: an extension of metabolic control analysis to non-steady state trajectories.

Ingalls BP, Sauro HM.

J Theor Biol. 2003 May 7;222(1):23-36.

PMID:
12699732
[PubMed - indexed for MEDLINE]

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