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Results: 19

1.

kdetrees: Non-parametric estimation of phylogenetic tree distributions.

Weyenberg G, Huggins PM, Schardl CL, Howe DK, Yoshida R.

Bioinformatics. 2014 Aug 15;30(16):2280-7. doi: 10.1093/bioinformatics/btu258. Epub 2014 Apr 24.

PMID:
24764459
[PubMed - in process]
2.

A support vector machine based test for incongruence between sets of trees in tree space.

Haws DC, Huggins P, O'Neill EM, Weisrock DW, Yoshida R.

BMC Bioinformatics. 2012 Aug 21;13:210. doi: 10.1186/1471-2105-13-210.

PMID:
22909268
[PubMed - indexed for MEDLINE]
Free PMC Article
3.

DECOD: fast and accurate discriminative DNA motif finding.

Huggins P, Zhong S, Shiff I, Beckerman R, Laptenko O, Prives C, Schulz MH, Simon I, Bar-Joseph Z.

Bioinformatics. 2011 Sep 1;27(17):2361-7. doi: 10.1093/bioinformatics/btr412. Epub 2011 Jul 12.

PMID:
21752801
[PubMed - indexed for MEDLINE]
Free PMC Article
4.

Bayes estimators for phylogenetic reconstruction.

Huggins PM, Li W, Haws D, Friedrich T, Liu J, Yoshida R.

Syst Biol. 2011 Jul;60(4):528-40. doi: 10.1093/sysbio/syr021. Epub 2011 Apr 6.

PMID:
21471560
[PubMed - indexed for MEDLINE]
Free PMC Article
5.

Apoptotic genes are differentially expressed in aged gingival tissue.

González OA, Stromberg AJ, Huggins PM, Gonzalez-Martinez J, Novak MJ, Ebersole JL.

J Dent Res. 2011 Jul;90(7):880-6. doi: 10.1177/0022034511403744. Epub 2011 Apr 6.

PMID:
21471327
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

Identification of differentially expressed thyroid hormone responsive genes from the brain of the Mexican Axolotl (Ambystoma mexicanum).

Huggins P, Johnson CK, Schoergendorfer A, Putta S, Bathke AC, Stromberg AJ, Voss SR.

Comp Biochem Physiol C Toxicol Pharmacol. 2012 Jan;155(1):128-35. doi: 10.1016/j.cbpc.2011.03.006. Epub 2011 Mar 30.

PMID:
21457787
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

Parametric analysis of alignment and phylogenetic uncertainty.

Malaspinas AS, Eriksson N, Huggins P.

Bull Math Biol. 2011 Apr;73(4):795-810. doi: 10.1007/s11538-010-9610-8. Epub 2011 Mar 16.

PMID:
21409513
[PubMed - indexed for MEDLINE]
8.

Statistical phylogenetic tree analysis using differences of means.

Arnaoudova E, Haws DC, Huggins P, Jaromczyk JW, Moore N, Schardl CL, Yoshida R.

Front Neurosci. 2010 Aug 3;4. pii: 47. doi: 10.3389/fnins.2010.00047. eCollection 2010.

PMID:
20802801
[PubMed]
Free PMC Article
9.

Boundaries, shading, and border ownership: A cusp at their interaction.

Lawlor M, Holtmann-Rice D, Huggins P, Ben-Shahar O, Zucker SW.

J Physiol Paris. 2009 Jan-Mar;103(1-2):18-36. doi: 10.1016/j.jphysparis.2009.05.005. Epub 2009 May 27. Review.

PMID:
19481147
[PubMed - indexed for MEDLINE]
10.

Cross species analysis of microarray expression data.

Lu Y, Huggins P, Bar-Joseph Z.

Bioinformatics. 2009 Jun 15;25(12):1476-83. doi: 10.1093/bioinformatics/btp247. Epub 2009 Apr 8. Review.

PMID:
19357096
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

On the optimality of the neighbor-joining algorithm.

Eickmeyer K, Huggins P, Pachter L, Yoshida R.

Algorithms Mol Biol. 2008 Apr 30;3:5. doi: 10.1186/1748-7188-3-5.

PMID:
18447942
[PubMed]
Free PMC Article
12.

Toward the human genotope.

Huggins P, Pachter L, Sturmfels B.

Bull Math Biol. 2007 Nov;69(8):2723-35. Epub 2007 Sep 15.

PMID:
17874271
[PubMed - indexed for MEDLINE]
13.

HIV-1 drug resistance in variants from the female genital tract and plasma.

Kemal KS, Burger H, Mayers D, Anastos K, Foley B, Kitchen C, Huggins P, Schroeder T, Picchio G, Back S, Gao W, Meyer WA 3rd, Weiser B.

J Infect Dis. 2007 Feb 15;195(4):535-45. Epub 2007 Jan 8.

PMID:
17230413
[PubMed - indexed for MEDLINE]
Free Article
14.

Parametric alignment of Drosophila genomes.

Dewey CN, Huggins PM, Woods K, Sturmfels B, Pachter L.

PLoS Comput Biol. 2006 Jun 23;2(6):e73. Epub 2006 Jun 23.

PMID:
16789815
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

Cortical connections and early visual function: intra- and inter-columnar processing.

Ben-Shahar O, Huggins PS, Izo T, Zucker SW.

J Physiol Paris. 2003 Mar-May;97(2-3):191-208. Review.

PMID:
14766141
[PubMed - indexed for MEDLINE]
16.

Effects of nasogastric tubes on the young, normal swallowing mechanism.

Huggins PS, Tuomi SK, Young C.

Dysphagia. 1999 Summer;14(3):157-61.

PMID:
10341113
[PubMed - indexed for MEDLINE]
17.

A modular seating system for cerebral-palsied children.

Trefler E, Hanks S, Huggins P, Chiarizzo S, Hobson D.

Dev Med Child Neurol. 1978 Apr;20(2):199-204.

PMID:
640264
[PubMed - indexed for MEDLINE]
18.

The managment of severe agoraphobia: a comparison of iproniazid and systematic desensitization.

Lipsedge MS, Hajioff J, Huggins P, Napier L, Pearce J, Pike DJ, Rich M.

Psychopharmacologia. 1973 Aug 22;32(1):67-80. No abstract available.

PMID:
4743236
[PubMed - indexed for MEDLINE]
19.

ELECTROSHOCK WITH AND WITHOUT BARBITURATE ANESTHESIA: A STUDY OF PATIENT PREFERENCE.

HUGGINS PK, SANDIFER MG, PEARSON WS.

J Nerv Ment Dis. 1964 Feb;138:141-5. No abstract available.

PMID:
14119511
[PubMed - indexed for MEDLINE]

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