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Results: 1 to 20 of 78

1.

Telomerase reverse transcriptase has an extratelomeric function in somatic cell reprogramming.

Kinoshita T, Nagamatsu G, Saito S, Takubo K, Horimoto K, Suda T.

J Biol Chem. 2014 May 30;289(22):15776-87. doi: 10.1074/jbc.M113.536037. Epub 2014 Apr 14.

PMID:
24733392
[PubMed - indexed for MEDLINE]
2.

SIRT1 regulates lamellipodium extension and migration of melanoma cells.

Kunimoto R, Jimbow K, Tanimura A, Sato M, Horimoto K, Hayashi T, Hisahara S, Sugino T, Hirobe T, Yamashita T, Horio Y.

J Invest Dermatol. 2014 Jun;134(6):1693-700. doi: 10.1038/jid.2014.50. Epub 2014 Jan 30.

PMID:
24480879
[PubMed - indexed for MEDLINE]
3.

Identification of master regulator candidates in conjunction with network screening and inference.

Saito S, Zhou X, Bae T, Kim S, Horimoto K.

Int J Data Min Bioinform. 2013;8(3):366-80.

PMID:
24417028
[PubMed - indexed for MEDLINE]
4.

MIDDAS-M: motif-independent de novo detection of secondary metabolite gene clusters through the integration of genome sequencing and transcriptome data.

Umemura M, Koike H, Nagano N, Ishii T, Kawano J, Yamane N, Kozone I, Horimoto K, Shin-ya K, Asai K, Yu J, Bennett JW, Machida M.

PLoS One. 2013 Dec 31;8(12):e84028. doi: 10.1371/journal.pone.0084028. eCollection 2013.

PMID:
24391870
[PubMed - indexed for MEDLINE]
Free PMC Article
5.

Gaussian graphical model for identifying significantly responsive regulatory networks from time course high-throughput data.

Liu ZP, Zhang W, Horimoto K, Chen L.

IET Syst Biol. 2013 Oct;7(5):143-52. doi: 10.1049/iet-syb.2012.0062.

PMID:
24067414
[PubMed - indexed for MEDLINE]
6.

Identification of upstream regulators for prognostic expression signature genes in colorectal cancer.

Bae T, Rho K, Choi JW, Horimoto K, Kim W, Kim S.

BMC Syst Biol. 2013 Sep 4;7:86. doi: 10.1186/1752-0509-7-86.

PMID:
24006872
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

Association of Rev-erbα in adipose tissues with Type 2 diabetes mellitus amelioration after gastric bypass surgery in Goto-Kakizaki rats.

Zhang R, Yan C, Zhou X, Qian B, Li F, Sun Y, Shi C, Li B, Saito S, Horimoto K, Zhou H.

Am J Physiol Regul Integr Comp Physiol. 2013 Jul 15;305(2):R134-46. doi: 10.1152/ajpregu.00520.2012. Epub 2013 May 1.

PMID:
23637135
[PubMed - indexed for MEDLINE]
8.

Identification of drug candidate against prostate cancer from the aspect of somatic cell reprogramming.

Kosaka T, Nagamatsu G, Saito S, Oya M, Suda T, Horimoto K.

Cancer Sci. 2013 Aug;104(8):1017-26. doi: 10.1111/cas.12183. Epub 2013 May 26.

PMID:
23600803
[PubMed - indexed for MEDLINE]
9.

Gene expression profiling of hepatitis B- and hepatitis C-related hepatocellular carcinoma using graphical Gaussian modeling.

Ueda T, Honda M, Horimoto K, Aburatani S, Saito S, Yamashita T, Sakai Y, Nakamura M, Takatori H, Sunagozaka H, Kaneko S.

Genomics. 2013 Apr;101(4):238-48. doi: 10.1016/j.ygeno.2013.02.007. Epub 2013 Feb 26. Erratum in: Genomics. 2013 Jun;101(6):376.

PMID:
23485556
[PubMed - indexed for MEDLINE]
Free Article
10.

Induction of pluripotent stem cells from primordial germ cells by single reprogramming factors.

Nagamatsu G, Kosaka T, Saito S, Honda H, Takubo K, Kinoshita T, Akiyama H, Sudo T, Horimoto K, Oya M, Suda T.

Stem Cells. 2013 Mar;31(3):479-87. doi: 10.1002/stem.1303.

PMID:
23255173
[PubMed - indexed for MEDLINE]
11.

Network completion using dynamic programming and least-squares fitting.

Nakajima N, Tamura T, Yamanishi Y, Horimoto K, Akutsu T.

ScientificWorldJournal. 2012;2012:957620. doi: 10.1100/2012/957620. Epub 2012 Nov 1.

PMID:
23213307
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

A computational procedure for identifying master regulator candidates: a case study on diabetes progression in Goto-Kakizaki rats.

Piao G, Saito S, Sun Y, Liu ZP, Wang Y, Han X, Wu J, Zhou H, Chen L, Horimoto K.

BMC Syst Biol. 2012 Jul 16;6 Suppl 1:S2. doi: 10.1186/1752-0509-6-S1-S2. Epub 2012 Jul 16.

PMID:
23046543
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

Optimal ratio of transcription factors for somatic cell reprogramming.

Nagamatsu G, Saito S, Kosaka T, Takubo K, Kinoshita T, Oya M, Horimoto K, Suda T.

J Biol Chem. 2012 Oct 19;287(43):36273-82. doi: 10.1074/jbc.M112.380683. Epub 2012 Sep 6.

PMID:
22955270
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

Tracing the conversion process from primordial germ cells to pluripotent stem cells in mice.

Nagamatsu G, Kosaka T, Saito S, Takubo K, Akiyama H, Sudo T, Horimoto K, Oya M, Suda T.

Biol Reprod. 2012 Jun 14;86(6):182. doi: 10.1095/biolreprod.111.096792. Print 2012 Jun.

PMID:
22423052
[PubMed - indexed for MEDLINE]
Free Article
15.

Brute force meets Bruno force in parameter optimisation: introduction of novel constraints for parameter accuracy improvement by symbolic computation.

Nakatsui M, Horimoto K, Lemaire F, Ürgüplü A, Sedoglavic A, Boulier F.

IET Syst Biol. 2011 Sep;5(5):281-92. doi: 10.1049/iet-syb.2010.0051.

PMID:
22010755
[PubMed - indexed for MEDLINE]
16.

Triclosan, an antibacterial agent, increases intracellular Zn(2+) concentration in rat thymocytes: its relation to oxidative stress.

Tamura I, Kanbara Y, Saito M, Horimoto K, Satoh M, Yamamoto H, Oyama Y.

Chemosphere. 2012 Jan;86(1):70-5. doi: 10.1016/j.chemosphere.2011.09.009. Epub 2011 Oct 15.

PMID:
22000841
[PubMed - indexed for MEDLINE]
17.

Plasma free amino acid profiling of five types of cancer patients and its application for early detection.

Miyagi Y, Higashiyama M, Gochi A, Akaike M, Ishikawa T, Miura T, Saruki N, Bando E, Kimura H, Imamura F, Moriyama M, Ikeda I, Chiba A, Oshita F, Imaizumi A, Yamamoto H, Miyano H, Horimoto K, Tochikubo O, Mitsushima T, Yamakado M, Okamoto N.

PLoS One. 2011;6(9):e24143. doi: 10.1371/journal.pone.0024143. Epub 2011 Sep 7.

PMID:
21915291
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

Possible linkages between the inner and outer cellular states of human induced pluripotent stem cells.

Saito S, Onuma Y, Ito Y, Tateno H, Toyoda M, Hidenori A, Nishino K, Chikazawa E, Fukawatase Y, Miyagawa Y, Okita H, Kiyokawa N, Shimma Y, Umezawa A, Hirabayashi J, Horimoto K, Asashima M.

BMC Syst Biol. 2011 Jun 20;5 Suppl 1:S17. doi: 10.1186/1752-0509-5-S1-S17.

PMID:
21689476
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

Network screening of Goto-Kakizaki rat liver microarray data during diabetic progression.

Zhou H, Saito S, Piao G, Liu ZP, Wang J, Horimoto K, Chen L.

BMC Syst Biol. 2011 Jun 20;5 Suppl 1:S16. doi: 10.1186/1752-0509-5-S1-S16.

PMID:
21689475
[PubMed - indexed for MEDLINE]
Free PMC Article
20.

Glycome diagnosis of human induced pluripotent stem cells using lectin microarray.

Tateno H, Toyota M, Saito S, Onuma Y, Ito Y, Hiemori K, Fukumura M, Matsushima A, Nakanishi M, Ohnuma K, Akutsu H, Umezawa A, Horimoto K, Hirabayashi J, Asashima M.

J Biol Chem. 2011 Jun 10;286(23):20345-53. doi: 10.1074/jbc.M111.231274. Epub 2011 Apr 6.

PMID:
21471226
[PubMed - indexed for MEDLINE]
Free PMC Article

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