Display Settings:

Format
Items per page
Sort by

Send to:

Choose Destination

Results: 20

1.

Filling Your Shelves: Synthesizing Diverse Style-Preserving Artifact Arrangements.

Majerowicz L, Shamir A, Sheffer A, Hoos HH.

IEEE Trans Vis Comput Graph. 2013 Oct 17. [Epub ahead of print]

PMID:
24144983
[PubMed - as supplied by publisher]
2.

Ensemble-based prediction of RNA secondary structures.

Aghaeepour N, Hoos HH.

BMC Bioinformatics. 2013 Apr 24;14:139. doi: 10.1186/1471-2105-14-139.

PMID:
23617269
[PubMed - indexed for MEDLINE]
Free PMC Article
3.

RchyOptimyx: cellular hierarchy optimization for flow cytometry.

Aghaeepour N, Jalali A, O'Neill K, Chattopadhyay PK, Roederer M, Hoos HH, Brinkman RR.

Cytometry A. 2012 Dec;81(12):1022-30. doi: 10.1002/cyto.a.22209. Epub 2012 Oct 8.

PMID:
23044634
[PubMed - indexed for MEDLINE]
Free PMC Article
4.

Early immunologic correlates of HIV protection can be identified from computational analysis of complex multivariate T-cell flow cytometry assays.

Aghaeepour N, Chattopadhyay PK, Ganesan A, O'Neill K, Zare H, Jalali A, Hoos HH, Roederer M, Brinkman RR.

Bioinformatics. 2012 Apr 1;28(7):1009-16. doi: 10.1093/bioinformatics/bts082. Epub 2012 Feb 29.

PMID:
22383736
[PubMed - indexed for MEDLINE]
Free PMC Article
5.

Analysis of energy-based algorithms for RNA secondary structure prediction.

Hajiaghayi M, Condon A, Hoos HH.

BMC Bioinformatics. 2012 Feb 1;13:22. doi: 10.1186/1471-2105-13-22.

PMID:
22296803
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

Rapid cell population identification in flow cytometry data.

Aghaeepour N, Nikolic R, Hoos HH, Brinkman RR.

Cytometry A. 2011 Jan;79(1):6-13. doi: 10.1002/cyto.a.21007.

PMID:
21182178
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

Computational approaches for RNA energy parameter estimation.

Andronescu M, Condon A, Hoos HH, Mathews DH, Murphy KP.

RNA. 2010 Dec;16(12):2304-18. doi: 10.1261/rna.1950510. Epub 2010 Oct 12.

PMID:
20940338
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

RNA STRAND: the RNA secondary structure and statistical analysis database.

Andronescu M, Bereg V, Hoos HH, Condon A.

BMC Bioinformatics. 2008 Aug 13;9:340. doi: 10.1186/1471-2105-9-340.

PMID:
18700982
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

Correlation between the secondary structure of pre-mRNA introns and the efficiency of splicing in Saccharomyces cerevisiae.

Rogic S, Montpetit B, Hoos HH, Mackworth AK, Ouellette BF, Hieter P.

BMC Genomics. 2008 Jul 29;9:355. doi: 10.1186/1471-2164-9-355.

PMID:
18664289
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

A replica exchange Monte Carlo algorithm for protein folding in the HP model.

Thachuk C, Shmygelska A, Hoos HH.

BMC Bioinformatics. 2007 Sep 17;8:342.

PMID:
17875212
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

Efficient parameter estimation for RNA secondary structure prediction.

Andronescu M, Condon A, Hoos HH, Mathews DH, Murphy KP.

Bioinformatics. 2007 Jul 1;23(13):i19-28.

PMID:
17646296
[PubMed - indexed for MEDLINE]
Free Article
12.

An adaptive bin framework search method for a beta-sheet protein homopolymer model.

Shmygelska A, Hoos HH.

BMC Bioinformatics. 2007 Apr 24;8:136.

PMID:
17451609
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

Computational RNA secondary structure design: empirical complexity and improved methods.

Aguirre-Hernández R, Hoos HH, Condon A.

BMC Bioinformatics. 2007 Jan 31;8:34.

PMID:
17266771
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

A thermodynamic approach to designing structure-free combinatorial DNA word sets.

Shortreed MR, Chang SB, Hong D, Phillips M, Campion B, Tulpan DC, Andronescu M, Condon A, Hoos HH, Smith LM.

Nucleic Acids Res. 2005 Sep 2;33(15):4965-77. Print 2005.

PMID:
16284197
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

HotKnots: heuristic prediction of RNA secondary structures including pseudoknots.

Ren J, Rastegari B, Condon A, Hoos HH.

RNA. 2005 Oct;11(10):1494-504.

PMID:
16199760
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

Thermodynamically based DNA strand design.

Tulpan D, Andronescu M, Chang SB, Shortreed MR, Condon A, Hoos HH, Smith LM.

Nucleic Acids Res. 2005 Sep 6;33(15):4951-64. Print 2005.

PMID:
16145053
[PubMed - indexed for MEDLINE]
Free PMC Article
17.

An ant colony optimisation algorithm for the 2D and 3D hydrophobic polar protein folding problem.

Shmygelska A, Hoos HH.

BMC Bioinformatics. 2005 Feb 14;6:30.

PMID:
15710037
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

A new algorithm for RNA secondary structure design.

Andronescu M, Fejes AP, Hutter F, Hoos HH, Condon A.

J Mol Biol. 2004 Feb 20;336(3):607-24.

PMID:
15095976
[PubMed - indexed for MEDLINE]
19.

RNAsoft: A suite of RNA secondary structure prediction and design software tools.

Andronescu M, Aguirre-Hernández R, Condon A, Hoos HH.

Nucleic Acids Res. 2003 Jul 1;31(13):3416-22.

PMID:
12824338
[PubMed - indexed for MEDLINE]
Free PMC Article
20.

Inference of transcriptional regulation relationships from gene expression data.

Kwon AT, Hoos HH, Ng R.

Bioinformatics. 2003 May 22;19(8):905-12.

PMID:
12761051
[PubMed - indexed for MEDLINE]
Free Article

Display Settings:

Format
Items per page
Sort by

Send to:

Choose Destination

Supplemental Content

Write to the Help Desk