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Items: 1 to 20 of 60

1.

Analysis of a minimal Rho-GTPase circuit regulating cell shape.

Holmes WR, Edelstein-Keshet L.

Phys Biol. 2016 Jul 19;13(4):046001. doi: 10.1088/1478-3975/13/4/046001.

PMID:
27434017
2.

Is cell migration or proliferation dominant in the formation of linear arrays of oligodendrocytes?

Walsh DM, Röth PT, Holmes WR, Landman KA, Merson TD, Hughes BD.

J Theor Biol. 2016 Jun 21;406:17-30. doi: 10.1016/j.jtbi.2016.06.028. [Epub ahead of print]

PMID:
27343034
3.

A new framework for modeling decisions about changing information: The Piecewise Linear Ballistic Accumulator model.

Holmes WR, Trueblood JS, Heathcote A.

Cogn Psychol. 2016 Mar;85:1-29. doi: 10.1016/j.cogpsych.2015.11.002. Epub 2016 Jan 4.

PMID:
26760448
4.

Modeling the roles of protein kinase Cβ and η in single-cell wound repair.

Holmes WR, Liao L, Bement W, Edelstein-Keshet L.

Mol Biol Cell. 2015 Nov 5;26(22):4100-8. doi: 10.1091/mbc.E15-06-0383. Epub 2015 Aug 26.

5.

The Interplay between Wnt Mediated Expansion and Negative Regulation of Growth Promotes Robust Intestinal Crypt Structure and Homeostasis.

Du H, Nie Q, Holmes WR.

PLoS Comput Biol. 2015 Aug 19;11(8):e1004285. doi: 10.1371/journal.pcbi.1004285. eCollection 2015 Aug.

6.

Correction: Understanding metal homeostasis in primary cultured neurons. Studies using single neuron subcellular and quantitative metallomics.

Colvin RA, Lai B, Holmes WR, Lee D.

Metallomics. 2015 Sep;7(9):1371. doi: 10.1039/c5mt90035b.

PMID:
26272417
7.

Minimizing the caliber of myelinated axons by means of nodal constrictions.

Johnson C, Holmes WR, Brown A, Jung P.

J Neurophysiol. 2015 Sep;114(3):1874-84. doi: 10.1152/jn.00338.2015. Epub 2015 Jul 29.

PMID:
26224772
8.

Understanding metal homeostasis in primary cultured neurons. Studies using single neuron subcellular and quantitative metallomics.

Colvin RA, Lai B, Holmes WR, Lee D.

Metallomics. 2015 Jul;7(7):1111-23. doi: 10.1039/c5mt00084j. Erratum in: Metallomics. 2015 Sep;7(9):1371.

PMID:
25894020
9.

Local perturbation analysis: a computational tool for biophysical reaction-diffusion models.

Holmes WR, Mata MA, Edelstein-Keshet L.

Biophys J. 2015 Jan 20;108(2):230-6. doi: 10.1016/j.bpj.2014.11.3457.

10.

Computational modelling of epidermal stratification highlights the importance of asymmetric cell division for predictable and robust layer formation.

Gord A, Holmes WR, Dai X, Nie Q.

J R Soc Interface. 2014 Oct 6;11(99). pii: 20140631. doi: 10.1098/rsif.2014.0631.

11.

Interactions and tradeoffs between cell recruitment, proliferation, and differentiation affect CNS regeneration.

Holmes WR, Nie Q.

Biophys J. 2014 Apr 1;106(7):1528-36. doi: 10.1016/j.bpj.2014.02.010.

12.

An excitable compass guides chemotaxis?

Holmes WR.

Biophys J. 2014 Mar 4;106(5):989-90. doi: 10.1016/j.bpj.2014.01.030. No abstract available.

13.

An efficient, nonlinear stability analysis for detecting pattern formation in reaction diffusion systems.

Holmes WR.

Bull Math Biol. 2014 Jan;76(1):157-83. doi: 10.1007/s11538-013-9914-6. Epub 2013 Oct 25.

14.

From simple to detailed models for cell polarization.

Edelstein-Keshet L, Holmes WR, Zajac M, Dutot M.

Philos Trans R Soc Lond B Biol Sci. 2013 Sep 23;368(1629):20130003. doi: 10.1098/rstb.2013.0003. Print 2013. Review.

15.

A model for intracellular actin waves explored by nonlinear local perturbation analysis.

Mata MA, Dutot M, Edelstein-Keshet L, Holmes WR.

J Theor Biol. 2013 Oct 7;334:149-61. doi: 10.1016/j.jtbi.2013.06.020. Epub 2013 Jul 2.

16.

A comparison of computational models for eukaryotic cell shape and motility.

Holmes WR, Edelstein-Keshet L.

PLoS Comput Biol. 2012;8(12):e1002793. doi: 10.1371/journal.pcbi.1002793. Epub 2012 Dec 27. Review.

17.

Synthetic spatially graded Rac activation drives cell polarization and movement.

Lin B, Holmes WR, Wang CJ, Ueno T, Harwell A, Edelstein-Keshet L, Inoue T, Levchenko A.

Proc Natl Acad Sci U S A. 2012 Dec 26;109(52):E3668-77. doi: 10.1073/pnas.1210295109. Epub 2012 Nov 26.

18.

Regimes of wave type patterning driven by refractory actin feedback: transition from static polarization to dynamic wave behaviour.

Holmes WR, Carlsson AE, Edelstein-Keshet L.

Phys Biol. 2012 Aug;9(4):046005. doi: 10.1088/1478-3975/9/4/046005. Epub 2012 Jul 11.

19.

Decreased afferent excitability contributes to synaptic depression during high-frequency stimulation in hippocampal area CA1.

Kim E, Owen B, Holmes WR, Grover LM.

J Neurophysiol. 2012 Oct;108(7):1965-76. doi: 10.1152/jn.00276.2011. Epub 2012 Jul 5.

20.

Modelling cell polarization driven by synthetic spatially graded Rac activation.

Holmes WR, Lin B, Levchenko A, Edelstein-Keshet L.

PLoS Comput Biol. 2012;8(6):e1002366. doi: 10.1371/journal.pcbi.1002366. Epub 2012 Jun 21.

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