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Results: 1 to 20 of 40

1.

A model system for studying the transcriptomic and physiological changes associated with mammalian host-adaptation by Leptospira interrogans serovar Copenhageni.

Caimano MJ, Sivasankaran SK, Allard A, Hurley D, Hokamp K, Grassmann AA, Hinton JC, Nally JE.

PLoS Pathog. 2014 Mar 13;10(3):e1004004. doi: 10.1371/journal.ppat.1004004. eCollection 2014 Mar.

PMID:
24626166
[PubMed - in process]
Free PMC Article
2.

A transcription factor network coordinates attraction, repulsion, and adhesion combinatorially to control motor axon pathway selection.

Zarin AA, Asadzadeh J, Hokamp K, McCartney D, Yang L, Bashaw GJ, Labrador JP.

Neuron. 2014 Mar 19;81(6):1297-311. doi: 10.1016/j.neuron.2014.01.038. Epub 2014 Feb 20.

PMID:
24560702
[PubMed - indexed for MEDLINE]
Free PMC Article
3.

Complete Genome Sequence of Salmonella enterica Serovar Agona Pulsed-Field Type SAGOXB.0066, Cause of a 2008 Pan-European Outbreak.

McCusker MP, Hokamp K, Buckley JF, Wall PG, Martins M, Fanning S.

Genome Announc. 2014 Jan 23;2(1). pii: e01219-13. doi: 10.1128/genomeA.01219-13.

PMID:
24459278
[PubMed]
Free PMC Article
4.

An infection-relevant transcriptomic compendium for Salmonella enterica Serovar Typhimurium.

Kröger C, Colgan A, Srikumar S, Händler K, Sivasankaran SK, Hammarlöf DL, Canals R, Grissom JE, Conway T, Hokamp K, Hinton JC.

Cell Host Microbe. 2013 Dec 11;14(6):683-95. doi: 10.1016/j.chom.2013.11.010.

PMID:
24331466
[PubMed - indexed for MEDLINE]
5.

Receptor-mediated recognition of mycobacterial pathogens.

Killick KE, Ní Cheallaigh C, O'Farrelly C, Hokamp K, MacHugh DE, Harris J.

Cell Microbiol. 2013 Sep;15(9):1484-95. doi: 10.1111/cmi.12161. Epub 2013 Jul 29. Review.

PMID:
23795683
[PubMed - indexed for MEDLINE]
6.

Whole-transcriptome, high-throughput RNA sequence analysis of the bovine macrophage response to Mycobacterium bovis infection in vitro.

Nalpas NC, Park SD, Magee DA, Taraktsoglou M, Browne JA, Conlon KM, Rue-Albrecht K, Killick KE, Hokamp K, Lohan AJ, Loftus BJ, Gormley E, Gordon SV, MacHugh DE.

BMC Genomics. 2013 Apr 8;14:230. doi: 10.1186/1471-2164-14-230.

PMID:
23565803
[PubMed - in process]
Free PMC Article
7.

The WalRK (YycFG) and σ(I) RsgI regulators cooperate to control CwlO and LytE expression in exponentially growing and stressed Bacillus subtilis cells.

Salzberg LI, Powell L, Hokamp K, Botella E, Noone D, Devine KM.

Mol Microbiol. 2013 Jan;87(1):180-95. doi: 10.1111/mmi.12092. Epub 2012 Nov 30.

PMID:
23199363
[PubMed - indexed for MEDLINE]
8.

LeuO is a global regulator of gene expression in Salmonella enterica serovar Typhimurium.

Dillon SC, Espinosa E, Hokamp K, Ussery DW, Casadesús J, Dorman CJ.

Mol Microbiol. 2012 Sep;85(6):1072-89. doi: 10.1111/j.1365-2958.2012.08162.x. Epub 2012 Jul 23.

PMID:
22804842
[PubMed - indexed for MEDLINE]
9.

Proteome-wide analysis of functional divergence in bacteria: exploring a host of ecological adaptations.

Caffrey BE, Williams TA, Jiang X, Toft C, Hokamp K, Fares MA.

PLoS One. 2012;7(4):e35659. doi: 10.1371/journal.pone.0035659. Epub 2012 Apr 26.

PMID:
22563391
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

The transcriptional landscape and small RNAs of Salmonella enterica serovar Typhimurium.

Kröger C, Dillon SC, Cameron AD, Papenfort K, Sivasankaran SK, Hokamp K, Chao Y, Sittka A, Hébrard M, Händler K, Colgan A, Leekitcharoenphon P, Langridge GC, Lohan AJ, Loftus B, Lucchini S, Ussery DW, Dorman CJ, Thomson NR, Vogel J, Hinton JC.

Proc Natl Acad Sci U S A. 2012 May 15;109(20):E1277-86. doi: 10.1073/pnas.1201061109. Epub 2012 Apr 25.

PMID:
22538806
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

Pan-genomic analysis of bovine monocyte-derived macrophage gene expression in response to in vitro infection with Mycobacterium avium subspecies paratuberculosis.

Machugh DE, Taraktsoglou M, Killick KE, Nalpas NC, Browne JA, DE Park S, Hokamp K, Gormley E, Magee DA.

Vet Res. 2012 Mar 28;43:25. doi: 10.1186/1297-9716-43-25.

PMID:
22455317
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

Global gene expression and systems biology analysis of bovine monocyte-derived macrophages in response to in vitro challenge with Mycobacterium bovis.

Magee DA, Taraktsoglou M, Killick KE, Nalpas NC, Browne JA, Park SD, Conlon KM, Lynn DJ, Hokamp K, Gordon SV, Gormley E, MacHugh DE.

PLoS One. 2012;7(2):e32034. doi: 10.1371/journal.pone.0032034. Epub 2012 Feb 22.

PMID:
22384131
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

Genome-wide transcriptional profiling of peripheral blood leukocytes from cattle infected with Mycobacterium bovis reveals suppression of host immune genes.

Killick KE, Browne JA, Park SD, Magee DA, Martin I, Meade KG, Gordon SV, Gormley E, O'Farrelly C, Hokamp K, MacHugh DE.

BMC Genomics. 2011 Dec 19;12:611. doi: 10.1186/1471-2164-12-611.

PMID:
22182502
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

Cell envelope gene expression in phosphate-limited Bacillus subtilis cells.

Botella E, Hübner S, Hokamp K, Hansen A, Bisicchia P, Noone D, Powell L, Salzberg LI, Devine KM.

Microbiology. 2011 Sep;157(Pt 9):2470-84. doi: 10.1099/mic.0.049205-0. Epub 2011 Jun 2.

PMID:
21636651
[PubMed - indexed for MEDLINE]
Free Article
15.

Genome-wide analysis of the H-NS and Sfh regulatory networks in Salmonella Typhimurium identifies a plasmid-encoded transcription silencing mechanism.

Dillon SC, Cameron AD, Hokamp K, Lucchini S, Hinton JC, Dorman CJ.

Mol Microbiol. 2010 Jun 1;76(5):1250-65. doi: 10.1111/j.1365-2958.2010.07173.x. Epub 2010 Apr 27.

PMID:
20444106
[PubMed - indexed for MEDLINE]
16.

G-protein-coupled receptor independent, immunomodulatory properties of chemokine CXCL9.

Gong JH, Nicholls EF, Elliott MR, Brown KL, Hokamp K, Roche FM, Cheung CY, Falsafi R, Brinkman FS, Bowdish DM, Hancock RE.

Cell Immunol. 2010;261(2):105-13. doi: 10.1016/j.cellimm.2009.11.007. Epub 2009 Dec 3.

PMID:
20038462
[PubMed - indexed for MEDLINE]
17.

Comparative transcript profiling of Candida albicans and Candida dubliniensis identifies SFL2, a C. albicans gene required for virulence in a reconstituted epithelial infection model.

Spiering MJ, Moran GP, Chauvel M, Maccallum DM, Higgins J, Hokamp K, Yeomans T, d'Enfert C, Coleman DC, Sullivan DJ.

Eukaryot Cell. 2010 Feb;9(2):251-65. doi: 10.1128/EC.00291-09. Epub 2009 Dec 18.

PMID:
20023067
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

Compensatory evolution of gene regulation in response to stress by Escherichia coli lacking RpoS.

Stoebel DM, Hokamp K, Last MS, Dorman CJ.

PLoS Genet. 2009 Oct;5(10):e1000671. doi: 10.1371/journal.pgen.1000671. Epub 2009 Oct 2.

PMID:
19798444
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

The complex relationship of gene duplication and essentiality.

Makino T, Hokamp K, McLysaght A.

Trends Genet. 2009 Apr;25(4):152-5. doi: 10.1016/j.tig.2009.03.001. Epub 2009 Mar 13.

PMID:
19285746
[PubMed - indexed for MEDLINE]
20.

The growth phase-dependent regulation of the pilus locus genes by two-component system TCS08 in Streptococcus pneumoniae.

Song XM, Connor W, Hokamp K, Babiuk LA, Potter AA.

Microb Pathog. 2009 Jan;46(1):28-35. doi: 10.1016/j.micpath.2008.10.006. Epub 2008 Oct 17.

PMID:
18983906
[PubMed - indexed for MEDLINE]

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