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Items: 1 to 20 of 145

1.

Dramatic performance of Clostridium thermocellum explained by its wide range of cellulase modalities.

Xu Q, Resch MG, Podkaminer K, Yang S, Baker JO, Donohoe BS, Wilson C, Klingeman DM, Olson DG, Decker SR, Giannone RJ, Hettich RL, Brown SD, Lynd LR, Bayer EA, Himmel ME, Bomble YJ.

Sci Adv. 2016 Feb 5;2(2):e1501254. doi: 10.1126/sciadv.1501254. eCollection 2016 Feb.

2.

Fungi Contribute Critical but Spatially Varying Roles in Nitrogen and Carbon Cycling in Acid Mine Drainage.

Mosier AC, Miller CS, Frischkorn KR, Ohm RA, Li Z, LaButti K, Lapidus A, Lipzen A, Chen C, Johnson J, Lindquist EA, Pan C, Hettich RL, Grigoriev IV, Singer SW, Banfield JF.

Front Microbiol. 2016 Mar 3;7:238. doi: 10.3389/fmicb.2016.00238. eCollection 2016.

3.

Characterization of Fatty Acids in Crenarchaeota by GC-MS and NMR.

Hamerly T, Tripet B, Wurch L, Hettich RL, Podar M, Bothner B, Copié V.

Archaea. 2015 Dec 31;2015:472726. doi: 10.1155/2015/472726. eCollection 2015.

4.

Draft Genome Sequence of Streptomyces vitaminophilus ATCC 31673, a Producer of Pyrrolomycin Antibiotics, Some of Which Contain a Nitro Group.

Mahan KM, Klingeman DM, Hettich RL, Parry RJ, Graham DE.

Genome Announc. 2016 Jan 21;4(1). pii: e01582-15. doi: 10.1128/genomeA.01582-15.

5.

Enhancing metaproteomics-The value of models and defined environmental microbial systems.

Herbst FA, Lünsmann V, Kjeldal H, Jehmlich N, Tholey A, von Bergen M, Nielsen JL, Hettich RL, Seifert J, Nielsen PH.

Proteomics. 2016 Mar;16(5):783-98. doi: 10.1002/pmic.201500305. Epub 2016 Jan 21. Review.

PMID:
26621789
6.

Integrating mRNA and Protein Sequencing Enables the Detection and Quantitative Profiling of Natural Protein Sequence Variants of Populus trichocarpa.

Abraham PE, Wang X, Ranjan P, Nookaew I, Zhang B, Tuskan GA, Hettich RL.

J Proteome Res. 2015 Dec 4;14(12):5318-26. doi: 10.1021/acs.jproteome.5b00823. Epub 2015 Oct 30.

PMID:
26483142
7.

Untargeted metabolomics studies employing NMR and LC-MS reveal metabolic coupling between Nanoarcheum equitans and its archaeal host Ignicoccus hospitalis.

Hamerly T, Tripet BP, Tigges M, Giannone RJ, Wurch L, Hettich RL, Podar M, Copié V, Bothner B.

Metabolomics. 2015 Aug 1;11(4):895-907.

PMID:
26273237
8.

An active atmospheric methane sink in high Arctic mineral cryosols.

Lau MC, Stackhouse BT, Layton AC, Chauhan A, Vishnivetskaya TA, Chourey K, Ronholm J, Mykytczuk NC, Bennett PC, Lamarche-Gagnon G, Burton N, Pollard WH, Omelon CR, Medvigy DM, Hettich RL, Pfiffner SM, Whyte LG, Onstott TC.

ISME J. 2015 Aug;9(8):1904. doi: 10.1038/ismej.2015.112. No abstract available.

9.

Strain-resolved microbial community proteomics reveals simultaneous aerobic and anaerobic function during gastrointestinal tract colonization of a preterm infant.

Brooks B, Mueller RS, Young JC, Morowitz MJ, Hettich RL, Banfield JF.

Front Microbiol. 2015 Jul 1;6:654. doi: 10.3389/fmicb.2015.00654. eCollection 2015.

10.

A roadmap for research on crassulacean acid metabolism (CAM) to enhance sustainable food and bioenergy production in a hotter, drier world.

Yang X, Cushman JC, Borland AM, Edwards EJ, Wullschleger SD, Tuskan GA, Owen NA, Griffiths H, Smith JA, De Paoli HC, Weston DJ, Cottingham R, Hartwell J, Davis SC, Silvera K, Ming R, Schlauch K, Abraham P, Stewart JR, Guo HB, Albion R, Ha J, Lim SD, Wone BW, Yim WC, Garcia T, Mayer JA, Petereit J, Nair SS, Casey E, Hettich RL, Ceusters J, Ranjan P, Palla KJ, Yin H, Reyes-García C, Andrade JL, Freschi L, Beltrán JD, Dever LV, Boxall SF, Waller J, Davies J, Bupphada P, Kadu N, Winter K, Sage RF, Aguilar CN, Schmutz J, Jenkins J, Holtum JA.

New Phytol. 2015 Aug;207(3):491-504. doi: 10.1111/nph.13393. Review.

PMID:
26153373
11.

Rescuing Those Left Behind: Recovering and Characterizing Underdigested Membrane and Hydrophobic Proteins To Enhance Proteome Measurement Depth.

Giannone RJ, Wurch LL, Podar M, Hettich RL.

Anal Chem. 2015 Aug 4;87(15):7720-8. doi: 10.1021/acs.analchem.5b01187. Epub 2015 Jul 21.

PMID:
26110888
12.

Metaproteomics reveals functional shifts in microbial and human proteins during a preterm infant gut colonization case.

Young JC, Pan C, Adams RM, Brooks B, Banfield JF, Morowitz MJ, Hettich RL.

Proteomics. 2015 Oct;15(20):3463-73. doi: 10.1002/pmic.201400563. Epub 2015 Jul 21.

PMID:
26077811
13.

Critical biogeochemical functions in the subsurface are associated with bacteria from new phyla and little studied lineages.

Hug LA, Thomas BC, Sharon I, Brown CT, Sharma R, Hettich RL, Wilkins MJ, Williams KH, Singh A, Banfield JF.

Environ Microbiol. 2016 Jan;18(1):159-73. doi: 10.1111/1462-2920.12930. Epub 2015 Jul 22.

PMID:
26033198
14.

Metagenome sequencing of a coastal marine microbial community from monterey bay, california.

Mueller RS, Bryson S, Kieft B, Li Z, Pett-Ridge J, Chavez F, Hettich RL, Pan C, Mayali X.

Genome Announc. 2015 Apr 30;3(2). pii: e00341-15. doi: 10.1128/genomeA.00341-15.

15.

Microbial metaproteomics for characterizing the range of metabolic functions and activities of human gut microbiota.

Xiong W, Abraham PE, Li Z, Pan C, Hettich RL.

Proteomics. 2015 Oct;15(20):3424-38. doi: 10.1002/pmic.201400571. Epub 2015 May 28. Review.

PMID:
25914197
16.

An active atmospheric methane sink in high Arctic mineral cryosols.

Lau MC, Stackhouse BT, Layton AC, Chauhan A, Vishnivetskaya TA, Chourey K, Ronholm J, Mykytczuk NC, Bennett PC, Lamarche-Gagnon G, Burton N, Pollard WH, Omelon CR, Medvigy DM, Hettich RL, Pfiffner SM, Whyte LG, Onstott TC.

ISME J. 2015 Aug;9(8):1880-91. doi: 10.1038/ismej.2015.13. Epub 2015 Apr 14. Erratum in: ISME J. 2015 Aug;9(8):1904.

PMID:
25871932
17.

Discrete and structurally unique proteins (tāpirins) mediate attachment of extremely thermophilic Caldicellulosiruptor species to cellulose.

Blumer-Schuette SE, Alahuhta M, Conway JM, Lee LL, Zurawski JV, Giannone RJ, Hettich RL, Lunin VV, Himmel ME, Kelly RM.

J Biol Chem. 2015 Apr 24;290(17):10645-56. doi: 10.1074/jbc.M115.641480. Epub 2015 Feb 26.

18.

A comparative multidimensional LC-MS proteomic analysis reveals mechanisms for furan aldehyde detoxification in Thermoanaerobacter pseudethanolicus 39E.

Clarkson SM, Hamilton-Brehm SD, Giannone RJ, Engle NL, Tschaplinski TJ, Hettich RL, Elkins JG.

Biotechnol Biofuels. 2014 Dec 3;7(1):165. doi: 10.1186/s13068-014-0165-z. eCollection 2014.

19.

Development of an enhanced metaproteomic approach for deepening the microbiome characterization of the human infant gut.

Xiong W, Giannone RJ, Morowitz MJ, Banfield JF, Hettich RL.

J Proteome Res. 2015 Jan 2;14(1):133-41. doi: 10.1021/pr500936p. Epub 2014 Nov 12.

20.

Nitrogen cycling. The environmental controls that govern the end product of bacterial nitrate respiration.

Kraft B, Tegetmeyer HE, Sharma R, Klotz MG, Ferdelman TG, Hettich RL, Geelhoed JS, Strous M.

Science. 2014 Aug 8;345(6197):676-9. doi: 10.1126/science.1254070.

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