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Results: 1 to 20 of 56

1.

Double-digest RAD sequencing using Ion Proton semiconductor platform (ddRADseq-ion) with nonmodel organisms.

Recknagel H, Jacobs A, Herzyk P, Elmer KR.

Mol Ecol Resour. 2015 Mar 23. doi: 10.1111/1755-0998.12406. [Epub ahead of print]

PMID:
25808755
2.

Regulation of human genome expression and RNA splicing by human papillomavirus 16 E2 protein.

Gauson EJ, Windle B, Donaldson MM, Caffarel MM, Dornan ES, Coleman N, Herzyk P, Henderson SC, Wang X, Morgan IM.

Virology. 2014 Nov;468-470:10-8. doi: 10.1016/j.virol.2014.07.022. Epub 2014 Aug 16.

PMID:
25129434
3.

Insertional mutagenesis and deep profiling reveals gene hierarchies and a Myc/p53-dependent bottleneck in lymphomagenesis.

Huser CA, Gilroy KL, de Ridder J, Kilbey A, Borland G, Mackay N, Jenkins A, Bell M, Herzyk P, van der Weyden L, Adams DJ, Rust AG, Cameron E, Neil JC.

PLoS Genet. 2014 Feb 27;10(2):e1004167. doi: 10.1371/journal.pgen.1004167. eCollection 2014 Feb.

4.

Nanotopographical effects on mesenchymal stem cell morphology and phenotype.

Tsimbouri P, Gadegaard N, Burgess K, White K, Reynolds P, Herzyk P, Oreffo R, Dalby MJ.

J Cell Biochem. 2014 Feb;115(2):380-90. doi: 10.1002/jcb.24673.

5.

Data-mining the FlyAtlas online resource to identify core functional motifs across transporting epithelia.

Chintapalli VR, Wang J, Herzyk P, Davies SA, Dow JA.

BMC Genomics. 2013 Jul 30;14:518. doi: 10.1186/1471-2164-14-518. Review.

6.

Developmental post-natal stress can alter the effects of pre-natal stress on the adult redox balance.

Marasco V, Spencer KA, Robinson J, Herzyk P, Costantini D.

Gen Comp Endocrinol. 2013 Sep 15;191:239-46. doi: 10.1016/j.ygcen.2013.07.003. Epub 2013 Jul 15.

PMID:
23867229
7.

Hyperosmotic priming of Arabidopsis seedlings establishes a long-term somatic memory accompanied by specific changes of the epigenome.

Sani E, Herzyk P, Perrella G, Colot V, Amtmann A.

Genome Biol. 2013 Jun 14;14(6):R59. doi: 10.1186/gb-2013-14-6-r59.

8.

A genomics approach in determining nanotopographical effects on MSC phenotype.

Tsimbouri PM, Murawski K, Hamilton G, Herzyk P, Oreffo RO, Gadegaard N, Dalby MJ.

Biomaterials. 2013 Mar;34(9):2177-84. doi: 10.1016/j.biomaterials.2012.12.019. Epub 2013 Jan 9.

9.

Genomic analysis of the role of transcription factor C/EBPδ in the regulation of cell behaviour on nanometric grooves.

Wiejak J, Tsimbouri PM, Herzyk P, Dalby MJ, Hamilton G, Yarwood SJ.

Biomaterials. 2013 Mar;34(8):1967-79. doi: 10.1016/j.biomaterials.2012.11.036. Epub 2012 Dec 13.

10.

FlyAtlas: database of gene expression in the tissues of Drosophila melanogaster.

Robinson SW, Herzyk P, Dow JA, Leader DP.

Nucleic Acids Res. 2013 Jan;41(Database issue):D744-50. doi: 10.1093/nar/gks1141. Epub 2012 Nov 29.

11.

Pre- and post-natal stress in context: effects on the stress physiology in a precocial bird.

Marasco V, Robinson J, Herzyk P, Spencer KA.

J Exp Biol. 2012 Nov 15;215(Pt 22):3955-64. doi: 10.1242/jeb.071423. Epub 2012 Aug 16.

12.

Anguillid herpesvirus 1 transcriptome.

van Beurden SJ, Gatherer D, Kerr K, Galbraith J, Herzyk P, Peeters BP, Rottier PJ, Engelsma MY, Davison AJ.

J Virol. 2012 Sep;86(18):10150-61. doi: 10.1128/JVI.01271-12. Epub 2012 Jul 11.

13.

Predicting the outer membrane proteome of Pasteurella multocida based on consensus prediction enhanced by results integration and manual confirmation.

E-komon T, Burchmore R, Herzyk P, Davies R.

BMC Bioinformatics. 2012 Apr 27;13:63. doi: 10.1186/1471-2105-13-63.

14.

Functional correlates of positional and gender-specific renal asymmetry in Drosophila.

Chintapalli VR, Terhzaz S, Wang J, Al Bratty M, Watson DG, Herzyk P, Davies SA, Dow JA.

PLoS One. 2012;7(4):e32577. doi: 10.1371/journal.pone.0032577. Epub 2012 Apr 4.

15.

Alternative splicing mediates responses of the Arabidopsis circadian clock to temperature changes.

James AB, Syed NH, Bordage S, Marshall J, Nimmo GA, Jenkins GI, Herzyk P, Brown JW, Nimmo HG.

Plant Cell. 2012 Mar;24(3):961-81. doi: 10.1105/tpc.111.093948. Epub 2012 Mar 9.

16.

The role of microtopography in cellular mechanotransduction.

McNamara LE, Burchmore R, Riehle MO, Herzyk P, Biggs MJ, Wilkinson CD, Curtis AS, Dalby MJ.

Biomaterials. 2012 Apr;33(10):2835-47. doi: 10.1016/j.biomaterials.2011.11.047. Epub 2012 Jan 16.

PMID:
22248989
17.

Rapid disruption of axon-glial integrity in response to mild cerebral hypoperfusion.

Reimer MM, McQueen J, Searcy L, Scullion G, Zonta B, Desmazieres A, Holland PR, Smith J, Gliddon C, Wood ER, Herzyk P, Brophy PJ, McCulloch J, Horsburgh K.

J Neurosci. 2011 Dec 7;31(49):18185-94. doi: 10.1523/JNEUROSCI.4936-11.2011.

18.

Metal selectivity determinants in a family of transition metal transporters.

Podar D, Scherer J, Noordally Z, Herzyk P, Nies D, Sanders D.

J Biol Chem. 2012 Jan 27;287(5):3185-96. doi: 10.1074/jbc.M111.305649. Epub 2011 Dec 2.

19.

High-resolution human cytomegalovirus transcriptome.

Gatherer D, Seirafian S, Cunningham C, Holton M, Dargan DJ, Baluchova K, Hector RD, Galbraith J, Herzyk P, Wilkinson GW, Davison AJ.

Proc Natl Acad Sci U S A. 2011 Dec 6;108(49):19755-60. doi: 10.1073/pnas.1115861108. Epub 2011 Nov 22.

20.

Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania.

Rogers MB, Hilley JD, Dickens NJ, Wilkes J, Bates PA, Depledge DP, Harris D, Her Y, Herzyk P, Imamura H, Otto TD, Sanders M, Seeger K, Dujardin JC, Berriman M, Smith DF, Hertz-Fowler C, Mottram JC.

Genome Res. 2011 Dec;21(12):2129-42. doi: 10.1101/gr.122945.111. Epub 2011 Oct 28.

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