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Results: 1 to 20 of 529

1.

Antihyperglycemic effect of ipragliflozin, a sodium-glucose co-transporter 2 inhibitor, in combination with oral antidiabetic drugs in mice.

Takasu T, Hayashizaki Y, Tahara A, Kurosaki E, Takakura S.

Clin Exp Pharmacol Physiol. 2014 Oct 14. doi: 10.1111/1440-1681.12317. [Epub ahead of print]

PMID:
25311502
[PubMed - as supplied by publisher]
2.

CORRIGENDUM: CCL2 enhances pluripotency of human induced pluripotent stem cells by activating hypoxia related genes.

Hasegawa Y, Tang D, Takahashi N, Hayashizaki Y, Forrest AR, The Fantom Consortium, Suzuki H.

Sci Rep. 2014 Sep 19;4:6385. doi: 10.1038/srep06385. No abstract available.

PMID:
25234845
[PubMed - in process]
Free PMC Article
3.

Mesencephalic dopaminergic neurons express a repertoire of olfactory receptors and respond to odorant-like molecules.

Grison A, Zucchelli S, Urzì A, Zamparo I, Lazarevic D, Pascarella G, Roncaglia P, Giorgetti A, Garcia-Esparcia P, Vlachouli C, Simone R, Persichetti F, Forrest AR, Hayashizaki Y, Carloni P, Ferrer I, Lodovichi C, Plessy C; FANTOM Consortium, Carninci P, Gustincich S.

BMC Genomics. 2014 Aug 27;15:729. doi: 10.1186/1471-2164-15-729.

PMID:
25164183
[PubMed - in process]
Free PMC Article
4.

Specific mesothelial signature marks the heterogeneity of mesenchymal stem cells from high-grade serous ovarian cancer.

Verardo R, Piazza S, Klaric E, Ciani Y, Bussadori G, Marzinotto S, Mariuzzi L, Cesselli D, Beltrami AP, Mano M, Itoh M, Kawaji H, Lassmann T, Carninci P, Hayashizaki Y, Forrest AR; Fantom Consortium, Beltrami CA, Schneider C.

Stem Cells. 2014 Nov;32(11):2998-3011. doi: 10.1002/stem.1791.

PMID:
25069783
[PubMed - in process]
5.

Single-nucleotide polymorphism (c.309T>G) in the MDM2 gene and lung cancer risk.

Enokida Y, Shimizu K, Kakegawa S, Atsumi J, Takase Y, Miyamae Y, Nagashima T, Ohtaki Y, Kaira K, Sunaga N, Yanagitani N, Yoshino R, Tsunekawa K, Igai H, Kamiyoshihara M, Usui K, Lezhava A, Tomizawa Y, Ishikawa T, Murakami M, Hayashizaki Y, Takeyoshi I.

Biomed Rep. 2014 Sep;2(5):719-724. Epub 2014 Jun 26.

PMID:
25054017
[PubMed]
Free PMC Article
6.

PAPD5-mediated 3' adenylation and subsequent degradation of miR-21 is disrupted in proliferative disease.

Boele J, Persson H, Shin JW, Ishizu Y, Newie IS, Søkilde R, Hawkins SM, Coarfa C, Ikeda K, Takayama K, Horie-Inoue K, Ando Y, Burroughs AM, Sasaki C, Suzuki C, Sakai M, Aoki S, Ogawa A, Hasegawa A, Lizio M, Kaida K, Teusink B, Carninci P, Suzuki H, Inoue S, Gunaratne PH, Rovira C, Hayashizaki Y, de Hoon MJ.

Proc Natl Acad Sci U S A. 2014 Aug 5;111(31):11467-72. doi: 10.1073/pnas.1317751111. Epub 2014 Jul 21.

PMID:
25049417
[PubMed - indexed for MEDLINE]
7.

A transient disruption of fibroblastic transcriptional regulatory network facilitates trans-differentiation.

Tomaru Y, Hasegawa R, Suzuki T, Sato T, Kubosaki A, Suzuki M, Kawaji H, Forrest AR, Hayashizaki Y; FANTOM Consortium, Shin JW, Suzuki H.

Nucleic Acids Res. 2014;42(14):8905-13. doi: 10.1093/nar/gku567. Epub 2014 Jul 10.

PMID:
25013174
[PubMed - in process]
Free Article
8.

CCL2 enhances pluripotency of human induced pluripotent stem cells by activating hypoxia related genes.

Hasegawa Y, Tang D, Takahashi N, Hayashizaki Y, Forrest AR; FANTOM Consortium, Suzuki H.

Sci Rep. 2014 Jun 24;4:5228. doi: 10.1038/srep05228.

PMID:
24957798
[PubMed - in process]
Free PMC Article
9.

Detecting expressed genes using CAGE.

Murata M, Nishiyori-Sueki H, Kojima-Ishiyama M, Carninci P, Hayashizaki Y, Itoh M.

Methods Mol Biol. 2014;1164:67-85. doi: 10.1007/978-1-4939-0805-9_7.

PMID:
24927836
[PubMed - in process]
10.

MOIRAI: a compact workflow system for CAGE analysis.

Hasegawa A, Daub C, Carninci P, Hayashizaki Y, Lassmann T.

BMC Bioinformatics. 2014 May 16;15:144. doi: 10.1186/1471-2105-15-144.

PMID:
24884663
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

Quantitative analysis of 3,4-dimethylmethcathinone in blood and urine by liquid chromatography-tandem mass spectrometry in a fatal case.

Usui K, Aramaki T, Hashiyada M, Hayashizaki Y, Funayama M.

Leg Med (Tokyo). 2014 Jul;16(4):222-6. doi: 10.1016/j.legalmed.2014.03.008. Epub 2014 Apr 5.

PMID:
24780695
[PubMed - in process]
12.

RECLU: a pipeline to discover reproducible transcriptional start sites and their alternative regulation using capped analysis of gene expression (CAGE).

Ohmiya H, Vitezic M, Frith MC, Itoh M, Carninci P, Forrest AR, Hayashizaki Y, Lassmann T; FANTOM Consortium.

BMC Genomics. 2014 Apr 25;15:269. doi: 10.1186/1471-2164-15-269.

PMID:
24779366
[PubMed - in process]
Free PMC Article
13.

Systemic identification of estrogen-regulated genes in breast cancer cells through cap analysis of gene expression mapping.

Yamaga R, Ikeda K, Boele J, Horie-Inoue K, Takayama K, Urano T, Kaida K, Carninci P, Kawai J, Hayashizaki Y, Ouchi Y, de Hoon M, Inoue S.

Biochem Biophys Res Commun. 2014 May 9;447(3):531-6. doi: 10.1016/j.bbrc.2014.04.033. Epub 2014 Apr 16.

PMID:
24746470
[PubMed - indexed for MEDLINE]
14.

Interactive visualization and analysis of large-scale sequencing datasets using ZENBU.

Severin J, Lizio M, Harshbarger J, Kawaji H, Daub CO, Hayashizaki Y; FANTOM Consortium, Bertin N, Forrest AR.

Nat Biotechnol. 2014 Mar;32(3):217-9. doi: 10.1038/nbt.2840. No abstract available.

PMID:
24727769
[PubMed - in process]
15.

Differential roles of epigenetic changes and Foxp3 expression in regulatory T cell-specific transcriptional regulation.

Morikawa H, Ohkura N, Vandenbon A, Itoh M, Nagao-Sato S, Kawaji H, Lassmann T, Carninci P, Hayashizaki Y, Forrest AR, Standley DM, Date H, Sakaguchi S; FANTOM Consortium.

Proc Natl Acad Sci U S A. 2014 Apr 8;111(14):5289-94. doi: 10.1073/pnas.1312717110. Epub 2014 Mar 27.

PMID:
24706905
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

Comparison of CAGE and RNA-seq transcriptome profiling using clonally amplified and single-molecule next-generation sequencing.

Kawaji H, Lizio M, Itoh M, Kanamori-Katayama M, Kaiho A, Nishiyori-Sueki H, Shin JW, Kojima-Ishiyama M, Kawano M, Murata M, Ninomiya-Fukuda N, Ishikawa-Kato S, Nagao-Sato S, Noma S, Hayashizaki Y, Forrest AR, Carninci P; FANTOM Consortium.

Genome Res. 2014 Apr;24(4):708-17. doi: 10.1101/gr.156232.113. Epub 2014 Mar 27.

PMID:
24676093
[PubMed - in process]
Free PMC Article
17.

Transcription and enhancer profiling in human monocyte subsets.

Schmidl C, Renner K, Peter K, Eder R, Lassmann T, Balwierz PJ, Itoh M, Nagao-Sato S, Kawaji H, Carninci P, Suzuki H, Hayashizaki Y, Andreesen R, Hume DA, Hoffmann P, Forrest AR, Kreutz MP, Edinger M, Rehli M; FANTOM consortium.

Blood. 2014 Apr 24;123(17):e90-9. doi: 10.1182/blood-2013-02-484188. Epub 2014 Mar 26.

PMID:
24671955
[PubMed - indexed for MEDLINE]
18.

Redefinition of the human mast cell transcriptome by deep-CAGE sequencing.

Motakis E, Guhl S, Ishizu Y, Itoh M, Kawaji H, de Hoon M, Lassmann T, Carninci P, Hayashizaki Y, Zuberbier T, Forrest AR, Babina M; FANTOM consortium.

Blood. 2014 Apr 24;123(17):e58-67. doi: 10.1182/blood-2013-02-483792. Epub 2014 Mar 26.

PMID:
24671954
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

The enhancer and promoter landscape of human regulatory and conventional T-cell subpopulations.

Schmidl C, Hansmann L, Lassmann T, Balwierz PJ, Kawaji H, Itoh M, Kawai J, Nagao-Sato S, Suzuki H, Andreesen R, Hayashizaki Y, Forrest AR, Carninci P, Hoffmann P, Edinger M, Rehli M; FANTOM consortium.

Blood. 2014 Apr 24;123(17):e68-78. doi: 10.1182/blood-2013-02-486944. Epub 2014 Mar 26.

PMID:
24671953
[PubMed - indexed for MEDLINE]
20.

Analysis of the DNA methylome and transcriptome in granulopoiesis reveals timed changes and dynamic enhancer methylation.

Rönnerblad M, Andersson R, Olofsson T, Douagi I, Karimi M, Lehmann S, Hoof I, de Hoon M, Itoh M, Nagao-Sato S, Kawaji H, Lassmann T, Carninci P, Hayashizaki Y, Forrest AR, Sandelin A, Ekwall K, Arner E, Lennartsson A; FANTOM consortium.

Blood. 2014 Apr 24;123(17):e79-89. doi: 10.1182/blood-2013-02-482893. Epub 2014 Mar 26.

PMID:
24671952
[PubMed - indexed for MEDLINE]

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