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Results: 1 to 20 of 106

1.

Early maternal alcohol consumption alters hippocampal DNA methylation, gene expression and volume in a mouse model.

Marjonen H, Sierra A, Nyman A, Rogojin V, Gröhn O, Linden AM, Hautaniemi S, Kaminen-Ahola N.

PLoS One. 2015 May 13;10(5):e0124931. doi: 10.1371/journal.pone.0124931. eCollection 2015.

2.

Identification of sample-specific regulations using integrative network level analysis.

Liu C, Louhimo R, Laakso M, Lehtonen R, Hautaniemi S.

BMC Cancer. 2015 Apr 28;15(1):319. doi: 10.1186/s12885-015-1265-2.

3.

MMP16 Mediates a Proteolytic Switch to Promote Cell-Cell Adhesion, Collagen Alignment, and Lymphatic Invasion in Melanoma.

Tatti O, Gucciardo E, Pekkonen P, Holopainen T, Louhimo R, Repo P, Maliniemi P, Lohi J, Rantanen V, Hautaniemi S, Alitalo K, Ranki A, Ojala PM, Keski-Oja J, Lehti K.

Cancer Res. 2015 May 15;75(10):2083-94. doi: 10.1158/0008-5472.CAN-14-1923. Epub 2015 Mar 25.

PMID:
25808867
4.

Origins and impacts of new mammalian exons.

Merkin JJ, Chen P, Alexis MS, Hautaniemi SK, Burge CB.

Cell Rep. 2015 Mar 31;10(12):1992-2005. doi: 10.1016/j.celrep.2015.02.058. Epub 2015 Mar 19.

5.

Genomic profile of pseudomyxoma peritonei analyzed using next-generation sequencing and immunohistochemistry.

Nummela P, Saarinen L, Thiel A, Järvinen P, Lehtonen R, Lepistö A, Järvinen H, Aaltonen LA, Hautaniemi S, Ristimäki A.

Int J Cancer. 2015 Mar 1;136(5):E282-9. doi: 10.1002/ijc.29245. Epub 2014 Oct 13.

PMID:
25274248
6.

Workflow for automated quantification of cerebromicrovascular gelatinase activity.

Mattila OS, Rantanen V, Saksi J, Strbian D, Pikkarainen T, Hautaniemi S, Lindsberg PJ.

Microvasc Res. 2015 Jan;97:19-24. doi: 10.1016/j.mvr.2014.08.009. Epub 2014 Sep 19.

PMID:
25242681
7.

Anima: modular workflow system for comprehensive image data analysis.

Rantanen V, Valori M, Hautaniemi S.

Front Bioeng Biotechnol. 2014 Jul 30;2:25. doi: 10.3389/fbioe.2014.00025. eCollection 2014.

8.

Dectin-1 pathway activates robust autophagy-dependent unconventional protein secretion in human macrophages.

Öhman T, Teirilä L, Lahesmaa-Korpinen AM, Cypryk W, Veckman V, Saijo S, Wolff H, Hautaniemi S, Nyman TA, Matikainen S.

J Immunol. 2014 Jun 15;192(12):5952-62. doi: 10.4049/jimmunol.1303213. Epub 2014 May 7.

PMID:
24808366
9.

Prostatic acid phosphatase is the main acid phosphatase with 5'-ectonucleotidase activity in the male mouse saliva and regulates salivation.

Araujo CL, Quintero IB, Kipar A, Herrala AM, Pulkka AE, Saarinen L, Hautaniemi S, Vihko P.

Am J Physiol Cell Physiol. 2014 Jun 1;306(11):C1017-27. doi: 10.1152/ajpcell.00062.2014. Epub 2014 Apr 9.

PMID:
24717577
10.

AIP inactivation leads to pituitary tumorigenesis through defective Gαi-cAMP signaling.

Tuominen I, Heliövaara E, Raitila A, Rautiainen MR, Mehine M, Katainen R, Donner I, Aittomäki V, Lehtonen HJ, Ahlsten M, Kivipelto L, Schalin-Jäntti C, Arola J, Hautaniemi S, Karhu A.

Oncogene. 2015 Feb 26;34(9):1174-84. doi: 10.1038/onc.2014.50. Epub 2014 Mar 24.

PMID:
24662816
11.

Biclustering methods: biological relevance and application in gene expression analysis.

Oghabian A, Kilpinen S, Hautaniemi S, Czeizler E.

PLoS One. 2014 Mar 20;9(3):e90801. doi: 10.1371/journal.pone.0090801. eCollection 2014.

12.

Deregulation of COMMD1 is associated with poor prognosis in diffuse large B-cell lymphoma.

Taskinen M, Louhimo R, Koivula S, Chen P, Rantanen V, Holte H, Delabie J, Karjalainen-Lindsberg ML, Björkholm M, Fluge Ø, Pedersen LM, Fjordén K, Jerkeman M, Eriksson M, Hautaniemi S, Leppä S.

PLoS One. 2014 Mar 13;9(3):e91031. doi: 10.1371/journal.pone.0091031. eCollection 2014.

13.

Comparative analysis of methods for identifying somatic copy number alterations from deep sequencing data.

Alkodsi A, Louhimo R, Hautaniemi S.

Brief Bioinform. 2015 Mar;16(2):242-54. doi: 10.1093/bib/bbu004. Epub 2014 Mar 5.

PMID:
24599115
14.

Adipocyte morphology and implications for metabolic derangements in acquired obesity.

Heinonen S, Saarinen L, Naukkarinen J, Rodríguez A, Frühbeck G, Hakkarainen A, Lundbom J, Lundbom N, Vuolteenaho K, Moilanen E, Arner P, Hautaniemi S, Suomalainen A, Kaprio J, Rissanen A, Pietiläinen KH.

Int J Obes (Lond). 2014 Nov;38(11):1423-31. doi: 10.1038/ijo.2014.31. Epub 2014 Feb 19.

PMID:
24549139
15.

Tissue-specific pioneer factors associate with androgen receptor cistromes and transcription programs.

Pihlajamaa P, Sahu B, Lyly L, Aittomäki V, Hautaniemi S, Jänne OA.

EMBO J. 2014 Feb 18;33(4):312-26. doi: 10.1002/embj.201385895. Epub 2014 Jan 22.

16.

Use of IgE and IgG4 epitope binding to predict the outcome of oral immunotherapy in cow's milk allergy.

Savilahti EM, Kuitunen M, Valori M, Rantanen V, Bardina L, Gimenez G, Mäkelä MJ, Hautaniemi S, Savilahti E, Sampson HA.

Pediatr Allergy Immunol. 2014 May;25(3):227-35. doi: 10.1111/pai.12186. Epub 2014 Jan 6.

17.

Molecular characterization of subcutaneous panniculitis-like T-cell lymphoma reveals upregulation of immunosuppression- and autoimmunity-associated genes.

Maliniemi P, Hahtola S, Ovaska K, Jeskanen L, Väkevä L, Jäntti K, Stadler R, Michonneau D, Fraitag S, Hautaniemi S, Ranki A.

Orphanet J Rare Dis. 2014 Nov 12;9:160. doi: 10.1186/s13023-014-0160-2.

18.

Identification of genetic markers with synergistic survival effect in cancer.

Louhimo R, Laakso M, Heikkinen T, Laitinen S, Manninen P, Rogojin V, Miettinen M, Blomqvist C, Liu J, Nevanlinna H, Hautaniemi S.

BMC Syst Biol. 2013;7 Suppl 1:S2. doi: 10.1186/1752-0509-7-S1-S2. Epub 2013 Aug 12.

19.

Individual and combined effects of DNA methylation and copy number alterations on miRNA expression in breast tumors.

Aure MR, Leivonen SK, Fleischer T, Zhu Q, Overgaard J, Alsner J, Tramm T, Louhimo R, Alnæs GI, Perälä M, Busato F, Touleimat N, Tost J, Børresen-Dale AL, Hautaniemi S, Troyanskaya OG, Lingjærde OC, Sahlberg KK, Kristensen VN.

Genome Biol. 2013 Nov 20;14(11):R126. doi: 10.1186/gb-2013-14-11-r126.

20.

Characterising metabolically healthy obesity in weight-discordant monozygotic twins.

Naukkarinen J, Heinonen S, Hakkarainen A, Lundbom J, Vuolteenaho K, Saarinen L, Hautaniemi S, Rodriguez A, Frühbeck G, Pajunen P, Hyötyläinen T, Orešič M, Moilanen E, Suomalainen A, Lundbom N, Kaprio J, Rissanen A, Pietiläinen KH.

Diabetologia. 2014 Jan;57(1):167-76. doi: 10.1007/s00125-013-3066-y. Epub 2013 Oct 8.

PMID:
24100782
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