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Results: 1 to 20 of 101

1.

Genomic profile of pseudomyxoma peritonei analyzed using next-generation sequencing and immunohistochemistry.

Nummela P, Saarinen L, Thiel A, Järvinen P, Lehtonen R, Lepistö A, Järvinen H, Aaltonen LA, Hautaniemi S, Ristimäki A.

Int J Cancer. 2014 Oct 1. doi: 10.1002/ijc.29245. [Epub ahead of print]

PMID:
25274248
[PubMed - as supplied by publisher]
2.

Workflow for automated quantification of cerebromicrovascular gelatinase activity.

Mattila OS, Rantanen V, Saksi J, Strbian D, Pikkarainen T, Hautaniemi S, Lindsberg PJ.

Microvasc Res. 2014 Sep 19;97C:19-24. doi: 10.1016/j.mvr.2014.08.009. [Epub ahead of print]

PMID:
25242681
[PubMed - as supplied by publisher]
3.

Anima: modular workflow system for comprehensive image data analysis.

Rantanen V, Valori M, Hautaniemi S.

Front Bioeng Biotechnol. 2014 Jul 30;2:25. doi: 10.3389/fbioe.2014.00025. eCollection 2014.

PMID:
25126541
[PubMed]
Free PMC Article
4.

Dectin-1 pathway activates robust autophagy-dependent unconventional protein secretion in human macrophages.

Öhman T, Teirilä L, Lahesmaa-Korpinen AM, Cypryk W, Veckman V, Saijo S, Wolff H, Hautaniemi S, Nyman TA, Matikainen S.

J Immunol. 2014 Jun 15;192(12):5952-62. doi: 10.4049/jimmunol.1303213. Epub 2014 May 7.

PMID:
24808366
[PubMed - indexed for MEDLINE]
5.

Prostatic acid phosphatase is the main acid phosphatase with 5'-ectonucleotidase activity in the male mouse saliva and regulates salivation.

Araujo CL, Quintero IB, Kipar A, Herrala AM, Pulkka AE, Saarinen L, Hautaniemi S, Vihko P.

Am J Physiol Cell Physiol. 2014 Jun 1;306(11):C1017-27. doi: 10.1152/ajpcell.00062.2014. Epub 2014 Apr 9.

PMID:
24717577
[PubMed - indexed for MEDLINE]
6.

AIP inactivation leads to pituitary tumorigenesis through defective Gαi-cAMP signaling.

Tuominen I, Heliövaara E, Raitila A, Rautiainen MR, Mehine M, Katainen R, Donner I, Aittomäki V, Lehtonen HJ, Ahlsten M, Kivipelto L, Schalin-Jäntti C, Arola J, Hautaniemi S, Karhu A.

Oncogene. 2014 Mar 24. doi: 10.1038/onc.2014.50. [Epub ahead of print]

PMID:
24662816
[PubMed - as supplied by publisher]
7.

Biclustering methods: biological relevance and application in gene expression analysis.

Oghabian A, Kilpinen S, Hautaniemi S, Czeizler E.

PLoS One. 2014 Mar 20;9(3):e90801. doi: 10.1371/journal.pone.0090801. eCollection 2014.

PMID:
24651574
[PubMed - in process]
Free PMC Article
8.

Deregulation of COMMD1 is associated with poor prognosis in diffuse large B-cell lymphoma.

Taskinen M, Louhimo R, Koivula S, Chen P, Rantanen V, Holte H, Delabie J, Karjalainen-Lindsberg ML, Björkholm M, Fluge Ø, Pedersen LM, Fjordén K, Jerkeman M, Eriksson M, Hautaniemi S, Leppä S.

PLoS One. 2014 Mar 13;9(3):e91031. doi: 10.1371/journal.pone.0091031. eCollection 2014.

PMID:
24625556
[PubMed - in process]
Free PMC Article
9.

Comparative analysis of methods for identifying somatic copy number alterations from deep sequencing data.

Alkodsi A, Louhimo R, Hautaniemi S.

Brief Bioinform. 2014 Mar 5. [Epub ahead of print]

PMID:
24599115
[PubMed - as supplied by publisher]
10.

Adipocyte morphology and implications for metabolic derangements in acquired obesity.

Heinonen S, Saarinen L, Naukkarinen J, Rodríguez A, Frühbeck G, Hakkarainen A, Lundbom J, Lundbom N, Vuolteenaho K, Moilanen E, Arner P, Hautaniemi S, Suomalainen A, Kaprio J, Rissanen A, Pietiläinen KH.

Int J Obes (Lond). 2014 Nov;38(11):1423-31. doi: 10.1038/ijo.2014.31. Epub 2014 Feb 19.

PMID:
24549139
[PubMed - in process]
11.

Tissue-specific pioneer factors associate with androgen receptor cistromes and transcription programs.

Pihlajamaa P, Sahu B, Lyly L, Aittomäki V, Hautaniemi S, Jänne OA.

EMBO J. 2014 Feb 18;33(4):312-26. doi: 10.1002/embj.201385895. Epub 2014 Jan 22.

PMID:
24451200
[PubMed - indexed for MEDLINE]
12.

Use of IgE and IgG4 epitope binding to predict the outcome of oral immunotherapy in cow's milk allergy.

Savilahti EM, Kuitunen M, Valori M, Rantanen V, Bardina L, Gimenez G, Mäkelä MJ, Hautaniemi S, Savilahti E, Sampson HA.

Pediatr Allergy Immunol. 2014 May;25(3):227-35. doi: 10.1111/pai.12186. Epub 2014 Jan 6.

PMID:
24393339
[PubMed - in process]
13.

Identification of genetic markers with synergistic survival effect in cancer.

Louhimo R, Laakso M, Heikkinen T, Laitinen S, Manninen P, Rogojin V, Miettinen M, Blomqvist C, Liu J, Nevanlinna H, Hautaniemi S.

BMC Syst Biol. 2013;7 Suppl 1:S2. doi: 10.1186/1752-0509-7-S1-S2. Epub 2013 Aug 12.

PMID:
24267921
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

Individual and combined effects of DNA methylation and copy number alterations on miRNA expression in breast tumors.

Aure MR, Leivonen SK, Fleischer T, Zhu Q, Overgaard J, Alsner J, Tramm T, Louhimo R, Alnæs GI, Perälä M, Busato F, Touleimat N, Tost J, Børresen-Dale AL, Hautaniemi S, Troyanskaya OG, Lingjærde OC, Sahlberg KK, Kristensen VN.

Genome Biol. 2013 Nov 20;14(11):R126. doi: 10.1186/gb-2013-14-11-r126.

PMID:
24257477
[PubMed - in process]
Free PMC Article
15.

Characterising metabolically healthy obesity in weight-discordant monozygotic twins.

Naukkarinen J, Heinonen S, Hakkarainen A, Lundbom J, Vuolteenaho K, Saarinen L, Hautaniemi S, Rodriguez A, Frühbeck G, Pajunen P, Hyötyläinen T, Orešič M, Moilanen E, Suomalainen A, Lundbom N, Kaprio J, Rissanen A, Pietiläinen KH.

Diabetologia. 2014 Jan;57(1):167-76. doi: 10.1007/s00125-013-3066-y. Epub 2013 Oct 8.

PMID:
24100782
[PubMed - indexed for MEDLINE]
16.

Plasticity of blood- and lymphatic endothelial cells and marker identification.

Keuschnigg J, Karinen S, Auvinen K, Irjala H, Mpindi JP, Kallioniemi O, Hautaniemi S, Jalkanen S, Salmi M.

PLoS One. 2013 Sep 10;8(9):e74293. doi: 10.1371/journal.pone.0074293. eCollection 2013. Erratum in: PLoS One. 2013;8(10). doi:10.1371/annotation/cfda269a-cb46-4735-b87f-42afccb6aeb1.

PMID:
24058540
[PubMed - indexed for MEDLINE]
Free PMC Article
17.

Transmembrane prostatic acid phosphatase (TMPAP) interacts with snapin and deficient mice develop prostate adenocarcinoma.

Quintero IB, Herrala AM, Araujo CL, Pulkka AE, Hautaniemi S, Ovaska K, Pryazhnikov E, Kulesskiy E, Ruuth MK, Soini Y, Sormunen RT, Khirug L, Vihko PT.

PLoS One. 2013 Sep 10;8(9):e73072. doi: 10.1371/journal.pone.0073072. eCollection 2013.

PMID:
24039861
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

Early Trichinella spiralis and Trichinella nativa infections induce similar gene expression profiles in rat jejunal mucosa.

Airas N, Näreaho A, Lindén J, Valo E, Hautaniemi S, Jokelainen P, Sukura A.

Exp Parasitol. 2013 Oct;135(2):363-9. doi: 10.1016/j.exppara.2013.07.024. Epub 2013 Aug 8.

PMID:
23932900
[PubMed - indexed for MEDLINE]
19.

Integrative analysis of deep sequencing data identifies estrogen receptor early response genes and links ATAD3B to poor survival in breast cancer.

Ovaska K, Matarese F, Grote K, Charapitsa I, Cervera A, Liu C, Reid G, Seifert M, Stunnenberg HG, Hautaniemi S.

PLoS Comput Biol. 2013;9(6):e1003100. doi: 10.1371/journal.pcbi.1003100. Epub 2013 Jun 20.

PMID:
23818839
[PubMed - indexed for MEDLINE]
Free PMC Article
20.

Insulin/IGF-1 signaling regulates proteasome activity through the deubiquitinating enzyme UBH-4.

Matilainen O, Arpalahti L, Rantanen V, Hautaniemi S, Holmberg CI.

Cell Rep. 2013 Jun 27;3(6):1980-95. doi: 10.1016/j.celrep.2013.05.012. Epub 2013 Jun 13.

PMID:
23770237
[PubMed - indexed for MEDLINE]
Free Article

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