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Items: 1 to 20 of 280

1.

Emergence of host-adapted Salmonella Enteritidis through rapid evolution in an immunocompromised host.

Klemm EJ, Gkrania-Klotsas E, Hadfield J, Forbester JL, Harris SR, Hale C, Heath JN, Wileman T, Clare S, Kane L, Goulding D, Otto TD, Kay S, Doffinger R, Cooke FJ, Carmichael A, Lever AM, Parkhill J, MacLennan CA, Kumararatne D, Dougan G, Kingsley RA.

Nat Microbiol. 2016 Mar;1(3). pii: 15023. Epub 2016 Jan 25.

PMID:
27127642
2.

The effect of genetic structure on molecular dating and tests for temporal signal.

Murray GG, Wang F, Harrison EM, Paterson GK, Mather AE, Harris SR, Holmes MA, Rambaut A, Welch JJ.

Methods Ecol Evol. 2016 Jan;7(1):80-89. Epub 2015 Sep 22.

3.

Agreement Between a Physical Therapist and an Orthopedic Surgeon in Children Referred for Gait Abnormalities.

Miller S, Harris SR, Mulpuri K.

Pediatr Phys Ther. 2016 Spring;28(1):85-92. doi: 10.1097/PEP.0000000000000207.

PMID:
27088694
4.

Microevolution of Monophasic Salmonella Typhimurium during Epidemic, United Kingdom, 2005-2010.

Petrovska L, Mather AE, AbuOun M, Branchu P, Harris SR, Connor T, Hopkins KL, Underwood A, Lettini AA, Page A, Bagnall M, Wain J, Parkhill J, Dougan G, Davies R, Kingsley RA.

Emerg Infect Dis. 2016 Apr;22(4):617-24. doi: 10.3201/eid2204.150531.

5.

The Ess/Type VII secretion system of Staphylococcus aureus shows unexpected genetic diversity.

Warne B, Harkins CP, Harris SR, Vatsiou A, Stanley-Wall N, Parkhill J, Peacock SJ, Palmer T, Holden MT.

BMC Genomics. 2016 Mar 11;17(1):222. doi: 10.1186/s12864-016-2426-7.

6.

Chlamydia trachomatis from Australian Aboriginal people with trachoma are polyphyletic composed of multiple distinctive lineages.

Andersson P, Harris SR, Smith HM, Hadfield J, O'Neill C, Cutcliffe LT, Douglas FP, Asche LV, Mathews JD, Hutton SI, Sarovich DS, Tong SY, Clarke IN, Thomson NR, Giffard PM.

Nat Commun. 2016 Feb 25;7:10688. doi: 10.1038/ncomms10688.

7.

Phylogenomic exploration of the relationships between strains of Mycobacterium avium subspecies paratuberculosis.

Bryant JM, Thibault VC, Smith DG, McLuckie J, Heron I, Sevilla IA, Biet F, Harris SR, Maskell DJ, Bentley SD, Parkhill J, Stevenson K.

BMC Genomics. 2016 Jan 26;17(1):79. doi: 10.1186/s12864-015-2234-5.

8.

Phylogeny, resistome and mobile genetic elements of emergent OXA-48 and OXA-245 Klebsiella pneumoniae clones circulating in Spain.

Pérez-Vázquez M, Oteo J, García-Cobos S, Aracil B, Harris SR, Ortega A, Fontanals D, Hernández JM, Solís S, Campos J, Dougan G, Kingsley RA.

J Antimicrob Chemother. 2016 Apr;71(4):887-96. doi: 10.1093/jac/dkv458. Epub 2016 Jan 13.

PMID:
26769896
9.

Circlator: automated circularization of genome assemblies using long sequencing reads.

Hunt M, Silva ND, Otto TD, Parkhill J, Keane JA, Harris SR.

Genome Biol. 2015 Dec 29;16:294. doi: 10.1186/s13059-015-0849-0.

10.

Erratum for Kulohoma et al., Comparative genomic analysis of meningitis- and bacteremia-causing pneumococci identifies a common core genome.

Kulohoma BW, Cornick JE, Chaguza C, Yalcin F, Harris SR, Gray KJ, Kiran AM, Molyneux E, French N, Parkhill J, Faragher BE, Everett DB, Bentley SD, Heyderman RS.

Infect Immun. 2015 Dec;83(12):4896. doi: 10.1128/IAI.01156-15. No abstract available.

11.

Measuring head circumference: Update on infant microcephaly.

Harris SR.

Can Fam Physician. 2015 Aug;61(8):680-4.

12.

Integrative Medicine: Education, Perceived Knowledge, Attitudes, and Practice among Academy of Nutrition and Dietetics Members.

Augustine MB, Swift KM, Harris SR, Anderson EJ, Hand RK.

J Acad Nutr Diet. 2016 Feb;116(2):319-29. doi: 10.1016/j.jand.2015.08.015. Epub 2015 Sep 16. No abstract available.

PMID:
26387076
13.

Comparative Genomic Analysis of Meningitis- and Bacteremia-Causing Pneumococci Identifies a Common Core Genome.

Kulohoma BW, Cornick JE, Chaguza C, Yalcin F, Harris SR, Gray KJ, Kiran AM, Molyneux E, French N, Parkhill J, Faragher BE, Everett DB, Bentley SD, Heyderman RS.

Infect Immun. 2015 Oct;83(10):4165-73. doi: 10.1128/IAI.00814-15. Epub 2015 Aug 10. Erratum in: Infect Immun. 2015 Dec;83(12):4896.

14.

Early insights into the potential of the Oxford Nanopore MinION for the detection of antimicrobial resistance genes.

Judge K, Harris SR, Reuter S, Parkhill J, Peacock SJ.

J Antimicrob Chemother. 2015 Oct;70(10):2775-8. doi: 10.1093/jac/dkv206. Epub 2015 Jul 28.

15.

Erratum for Boinett et al., Complete Genome Sequence of Bordetella pertussis D420.

Boinett CJ, Harris SR, Langridge GC, Trainor EA, Merkel TJ, Parkhill J.

Genome Announc. 2015 Jul 16;3(4). pii: e00842-15. doi: 10.1128/genomeA.00842-15. No abstract available.

16.

Genome specialization and decay of the strangles pathogen, Streptococcus equi, is driven by persistent infection.

Harris SR, Robinson C, Steward KF, Webb KS, Paillot R, Parkhill J, Holden MT, Waller AS.

Genome Res. 2015 Sep;25(9):1360-71. doi: 10.1101/gr.189803.115. Epub 2015 Jul 9.

17.

Correction: Signatures of Adaptation in Human Invasive Salmonella Typhimurium ST313 Populations from Sub-Saharan Africa.

Okoro CK, Barquist L, Connor TR, Harris SR, Clare S, Stevens MP, Arends MJ, Hale C, Kane L, Pickard DJ, Hill J, Harcourt K, Parkhill J, Dougan G, Kingsley RA.

PLoS Negl Trop Dis. 2015 Jun 15;9(6):e0003848. doi: 10.1371/journal.pntd.0003848. eCollection 2015 Jun. No abstract available.

18.

Complete Genome Sequence of Bordetella pertussis D420.

Boinett CJ, Harris SR, Langridge GC, Trainor EA, Merkel TJ, Parkhill J.

Genome Announc. 2015 Jun 11;3(3). pii: e00657-15. doi: 10.1128/genomeA.00657-15. Erratum in: Genome Announc. 2015;3(4). pii: e00842-15. doi: 10.1128/genomeA.00842-15.

19.

Motor skills of 5-year-old children who underwent early cardiac surgery.

Long SH, Eldridge BJ, Harris SR, Cheung MM.

Cardiol Young. 2016 Apr;26(4):650-7. doi: 10.1017/S1047951115000797. Epub 2015 Jun 5.

PMID:
26047495
20.

Locally Confined Clonal Complexes of Mycobacterium ulcerans in Two Buruli Ulcer Endemic Regions of Cameroon.

Bolz M, Bratschi MW, Kerber S, Minyem JC, Um Boock A, Vogel M, Bayi PF, Junghanss T, Brites D, Harris SR, Parkhill J, Pluschke G, Lamelas Cabello A.

PLoS Negl Trop Dis. 2015 Jun 5;9(6):e0003802. doi: 10.1371/journal.pntd.0003802. eCollection 2015.

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