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Results: 7

1.

Genome-wide mapping of DNA methylation in the human malaria parasite Plasmodium falciparum.

Ponts N, Fu L, Harris EY, Zhang J, Chung DW, Cervantes MC, Prudhomme J, Atanasova-Penichon V, Zehraoui E, Bunnik EM, Rodrigues EM, Lonardi S, Hicks GR, Wang Y, Le Roch KG.

Cell Host Microbe. 2013 Dec 11;14(6):696-706. doi: 10.1016/j.chom.2013.11.007.

PMID:
24331467
[PubMed - indexed for MEDLINE]
2.

Molecular hierarchy of mammary differentiation yields refined markers of mammary stem cells.

dos Santos CO, Rebbeck C, Rozhkova E, Valentine A, Samuels A, Kadiri LR, Osten P, Harris EY, Uren PJ, Smith AD, Hannon GJ.

Proc Natl Acad Sci U S A. 2013 Apr 30;110(18):7123-30. doi: 10.1073/pnas.1303919110. Epub 2013 Apr 11.

PMID:
23580620
[PubMed - indexed for MEDLINE]
Free PMC Article
3.

BRAT-BW: efficient and accurate mapping of bisulfite-treated reads.

Harris EY, Ponts N, Le Roch KG, Lonardi S.

Bioinformatics. 2012 Jul 1;28(13):1795-6. doi: 10.1093/bioinformatics/bts264. Epub 2012 May 3.

PMID:
22563065
[PubMed - indexed for MEDLINE]
Free PMC Article
4.

Chromatin-driven de novo discovery of DNA binding motifs in the human malaria parasite.

Harris EY, Ponts N, Le Roch KG, Lonardi S.

BMC Genomics. 2011 Dec 13;12:601. doi: 10.1186/1471-2164-12-601.

PMID:
22165844
[PubMed - indexed for MEDLINE]
Free PMC Article
5.

Nucleosome occupancy at transcription start sites in the human malaria parasite: a hard-wired evolution of virulence?

Ponts N, Harris EY, Lonardi S, Le Roch KG.

Infect Genet Evol. 2011 Jun;11(4):716-24. doi: 10.1016/j.meegid.2010.08.002. Epub 2010 Aug 11.

PMID:
20708104
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

Nucleosome landscape and control of transcription in the human malaria parasite.

Ponts N, Harris EY, Prudhomme J, Wick I, Eckhardt-Ludka C, Hicks GR, Hardiman G, Lonardi S, Le Roch KG.

Genome Res. 2010 Feb;20(2):228-38. doi: 10.1101/gr.101063.109. Epub 2010 Jan 6.

PMID:
20054063
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

BRAT: bisulfite-treated reads analysis tool.

Harris EY, Ponts N, Levchuk A, Roch KL, Lonardi S.

Bioinformatics. 2010 Feb 15;26(4):572-3. doi: 10.1093/bioinformatics/btp706. Epub 2009 Dec 22. Erratum in: Bioinformatics. 2010 Oct 1;26(19):2499.

PMID:
20031974
[PubMed - indexed for MEDLINE]
Free PMC Article

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