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Results: 1 to 20 of 114


Previously unknown evolutionary groups dominate the ssDNA gokushoviruses in oxic and anoxic waters of a coastal marine environment.

Labonté JM, Hallam SJ, Suttle CA.

Front Microbiol. 2015 Apr 22;6:315. doi: 10.3389/fmicb.2015.00315. eCollection 2015.


Combining genomic sequencing methods to explore viral diversity and reveal potential virus-host interactions.

Chow CE, Winget DM, White RA 3rd, Hallam SJ, Suttle CA.

Front Microbiol. 2015 Apr 10;6:265. doi: 10.3389/fmicb.2015.00265. eCollection 2015.


Forest harvesting reduces the soil metagenomic potential for biomass decomposition.

Cardenas E, Kranabetter JM, Hope G, Maas KR, Hallam S, Mohn WW.

ISME J. 2015 Apr 24. doi: 10.1038/ismej.2015.57. [Epub ahead of print]


Non-symbiotic Bradyrhizobium ecotypes dominate North American forest soils.

VanInsberghe D, Maas KR, Cardenas E, Strachan CR, Hallam SJ, Mohn WW.

ISME J. 2015 Apr 24. doi: 10.1038/ismej.2015.54. [Epub ahead of print]


Rare taxa have potential to make metabolic contributions in enhanced biological phosphorus removal ecosystems.

Lawson CE, Strachan BJ, Hanson NW, Hahn AS, Hall ER, Rabinowitz B, Mavinic DS, Ramey WD, Hallam SJ.

Environ Microbiol. 2015 Apr 9. doi: 10.1111/1462-2920.12875. [Epub ahead of print]


Single-cell genomics-based analysis of virus-host interactions in marine surface bacterioplankton.

Labonté JM, Swan BK, Poulos B, Luo H, Koren S, Hallam SJ, Sullivan MB, Woyke T, Eric Wommack K, Stepanauskas R.

ISME J. 2015 Apr 7. doi: 10.1038/ismej.2015.48. [Epub ahead of print]


Development of human B cells and antibodies following human hematopoietic stem cell transplantation to Rag2-/-γc-/- mice.

Tanner A, Hallam SJ, Nielsen SJ, Cuadra GI, Berges BK.

Transpl Immunol. 2015 Apr 2. pii: S0966-3274(15)00020-9. doi: 10.1016/j.trim.2015.03.002. [Epub ahead of print]


The microbial community of a passive biochemical reactor treating arsenic, zinc, and sulfate-rich seepage.

Baldwin SA, Khoshnoodi M, Rezadehbashi M, Taupp M, Hallam S, Mattes A, Sanei H.

Front Bioeng Biotechnol. 2015 Mar 6;3:27. doi: 10.3389/fbioe.2015.00027. eCollection 2015.


Microbes don't play solitaire: how cooperation trumps isolation in the microbial world.

Hallam SJ, McCutcheon JP.

Environ Microbiol Rep. 2015 Feb;7(1):26-8. doi: 10.1111/1758-2229.12248. No abstract available.


Immunodeficiency-associated renal Burkitt lymphoma.

White W, Blunden M, McAdoo SP, Sheaff M, Hallam S, McCafferty K.

Br J Haematol. 2015 Mar;168(6):769. doi: 10.1111/bjh.13246. Epub 2014 Nov 29. No abstract available.


Truncating variants in the majority of the cytoplasmic domain of PCDH15 are unlikely to cause Usher syndrome 1F.

Perreault-Micale C, Frieden A, Kennedy CJ, Neitzel D, Sullivan J, Faulkner N, Hallam S, Greger V.

J Mol Diagn. 2014 Nov;16(6):673-8. doi: 10.1016/j.jmoldx.2014.07.001.


Illuminating microbial dark matter in meromictic Sakinaw Lake.

Gies EA, Konwar KM, Beatty JT, Hallam SJ.

Appl Environ Microbiol. 2014 Nov;80(21):6807-18. doi: 10.1128/AEM.01774-14. Epub 2014 Aug 29.


Ecology and evolution of viruses infecting uncultivated SUP05 bacteria as revealed by single-cell- and meta-genomics.

Roux S, Hawley AK, Torres Beltran M, Scofield M, Schwientek P, Stepanauskas R, Woyke T, Hallam SJ, Sullivan MB.

Elife. 2014 Aug 29;3:e03125. doi: 10.7554/eLife.03125.


Metaproteomics reveals differential modes of metabolic coupling among ubiquitous oxygen minimum zone microbes.

Hawley AK, Brewer HM, Norbeck AD, Paša-Tolić L, Hallam SJ.

Proc Natl Acad Sci U S A. 2014 Aug 5;111(31):11395-400. doi: 10.1073/pnas.1322132111. Epub 2014 Jul 22.


Metabolic pathways for the whole community.

Hanson NW, Konwar KM, Hawley AK, Altman T, Karp PD, Hallam SJ.

BMC Genomics. 2014 Jul 22;15:619. doi: 10.1186/1471-2164-15-619.


Metagenomic scaffolds enable combinatorial lignin transformation.

Strachan CR, Singh R, VanInsberghe D, Ievdokymenko K, Budwill K, Mohn WW, Eltis LD, Hallam SJ.

Proc Natl Acad Sci U S A. 2014 Jul 15;111(28):10143-8. doi: 10.1073/pnas.1401631111. Epub 2014 Jun 30.


Prokaryotic Super Program Advisory Committee DOE Joint Genome Institute, Walnut Creek, CA, March 27, 2013.

Garrity GM, Banfield J, Eisen J, van der Lelie N, McMahon T, Rusch D, Delong E, Moran MA, Currie C, Furhman J, Hallam S, Hugenholtz P, Moran N, Nelson K, Roberts R, Stepanauskas R.

Stand Genomic Sci. 2013 Jul 30;8(3):561-70. doi: 10.4056/sigs.4638348. eCollection 2013 Jul 30.


Next-generation DNA sequencing of HEXA: a step in the right direction for carrier screening.

Hoffman JD, Greger V, Strovel ET, Blitzer MG, Umbarger MA, Kennedy C, Bishop B, Saunders P, Porreca GJ, Schienda J, Davie J, Hallam S, Towne C.

Mol Genet Genomic Med. 2013 Nov;1(4):260-8. doi: 10.1002/mgg3.37. Epub 2013 Sep 16.


Validation for clinical use of, and initial clinical experience with, a novel approach to population-based carrier screening using high-throughput, next-generation DNA sequencing.

Hallam S, Nelson H, Greger V, Perreault-Micale C, Davie J, Faulkner N, Neitzel D, Casey K, Umbarger MA, Chennagiri N, Kramer AC, Porreca GJ, Kennedy CJ.

J Mol Diagn. 2014 Mar;16(2):180-9. doi: 10.1016/j.jmoldx.2013.10.006. Epub 2013 Dec 27.


Metabolic reprogramming by viruses in the sunlit and dark ocean.

Hurwitz BL, Hallam SJ, Sullivan MB.

Genome Biol. 2013 Nov 7;14(11):R123. doi: 10.1186/gb-2013-14-11-r123.

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